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1.
PLoS One ; 7(5): e36930, 2012.
Article in English | MEDLINE | ID: mdl-22662131

ABSTRACT

BACKGROUND: The gold standard for the diagnosis of cholera is stool culture, but this requires laboratory facilities and takes at least 24 hours. A rapid diagnostic test (RDT) that can be used by minimally trained staff at treatment centers could potentially improve the reporting and management of cholera outbreaks. METHODS: We evaluated the Crystal VC™ RDT under field conditions in Zanzibar in 2009. Patients presenting to treatment centers with watery diarrhea provided a stool sample for rapid diagnostic testing. Results were compared to stool culture performed in a reference laboratory. We assessed the overall performance of the RDT and evaluated whether previous intake of antibiotics, intravenous fluids, location of testing, and skill level of the technician affected the RDT results. RESULTS: We included stool samples from 624 patients. Compared to culture, the overall sensitivity of the RDT was 93.1% (95%CI: 88.7 to 96.2%), specificity was 49.2% (95%CI: 44.3 to 54.1%), the positive predictive value was 47.0% (95%CI: 42.1 to 52.0%) and the negative predictive value was 93.6% (95%CI: 89.6 to 96.5%). The overall false positivity rate was 50.8% (213/419); fieldworkers frequently misread very faint test lines as positive. CONCLUSION: The observed sensitivity of the Crystal VC RDT evaluated was similar compared to earlier versions, while specificity was poorer. The current version of the RDT could potentially be used as a screening tool in the field. Because of the high proportion of false positive results when field workers test stool specimens, positive results will need to be confirmed with stool culture.


Subject(s)
Cholera/diagnosis , Reagent Kits, Diagnostic , Humans , Reproducibility of Results , Sensitivity and Specificity , Tanzania
2.
Nat Cell Biol ; 11(6): 705-16, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19465924

ABSTRACT

The microRNA pathway has been implicated in the regulation of synaptic protein synthesis and ultimately in dendritic spine morphogenesis, a phenomenon associated with long-lasting forms of memory. However, the particular microRNAs (miRNAs) involved are largely unknown. Here we identify specific miRNAs that function at synapses to control dendritic spine structure by performing a functional screen. One of the identified miRNAs, miR-138, is highly enriched in the brain, localized within dendrites and negatively regulates the size of dendritic spines in rat hippocampal neurons. miR-138 controls the expression of acyl protein thioesterase 1 (APT1), an enzyme regulating the palmitoylation status of proteins that are known to function at the synapse, including the alpha(13) subunits of G proteins (Galpha(13)). RNA-interference-mediated knockdown of APT1 and the expression of membrane-localized Galpha(13) both suppress spine enlargement caused by inhibition of miR-138, suggesting that APT1-regulated depalmitoylation of Galpha(13) might be an important downstream event of miR-138 function. Our results uncover a previously unknown miRNA-dependent mechanism in neurons and demonstrate a previously unrecognized complexity of miRNA-dependent control of dendritic spine morphogenesis.


Subject(s)
Dendritic Spines , MicroRNAs/metabolism , Synapses , Thiolester Hydrolases/metabolism , Animals , Base Sequence , Cell Line , Dendritic Spines/enzymology , Dendritic Spines/ultrastructure , GTP-Binding Protein alpha Subunits, G12-G13/metabolism , Gene Expression Profiling , Hippocampus/cytology , Humans , Lipoylation , Mice , Mice, Inbred C57BL , MicroRNAs/genetics , Molecular Sequence Data , Morphogenesis , Neurons/cytology , Neurons/metabolism , Oligonucleotide Array Sequence Analysis , Rats , Receptors, Glutamate/metabolism , Synapses/metabolism , Synapses/ultrastructure , Thiolester Hydrolases/antagonists & inhibitors , Thiolester Hydrolases/genetics
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