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1.
J Biomech Eng ; 144(10)2022 10 01.
Article in English | MEDLINE | ID: mdl-35388404

ABSTRACT

Part II of this study evaluates the predictive ability of the skeletal muscle force model derived in Part I within the ankle joint complex. The model is founded in dimensional analysis and uses electromyography and the muscle force-length, force-velocity, and force-frequency curves as inputs. Seventeen subjects (eight males, nine females) performed five different exercises geared toward activating the primary muscles crossing the ankle joint. Motion capture, force plate, and electromyography data were collected during these exercises for use in the analysis. A constant, Km, was calculated for each muscle of each subject using four of the five exercises. The fifth exercise was then used to validate the results by treating the moments due to muscle forces as known and all other components in Euler's second law as unknown. While muscle forces cannot be directly validated in vivo, methods can be developed to test these values with reasonable confidence. This study compared moments about the ankle joint due to the calculated muscle forces to the sum of the moments due to all other sources and the kinematic terms in the second Newton-Euler equation of rigid body motion. Average percent errors for each subject ranged from 4.2% to 15.5% with a total average percent error across all subjects of 8.2%, while maximum percent errors for each subject ranged from 33.3% to 78.0% with an overall average maximum of 52.4%. Future work will examine sensitivity analyses to identify any potential simplifications to the model and solution process, as well as validate the model on a more complex joint system to ensure it still performs at a satisfactory level.


Subject(s)
Ankle Joint , Muscle, Skeletal , Ankle Joint/physiology , Biomechanical Phenomena , Electromyography , Female , Humans , Male , Mechanical Phenomena , Muscle, Skeletal/physiology
2.
Respir Med ; 104(5): 675-81, 2010 May.
Article in English | MEDLINE | ID: mdl-20004089

ABSTRACT

OBJECTIVE: It is well documented that plasma ammonia accumulates during exercise under conditions of metabolic stress. Metabolic stress (when skeletal muscle ATP supply fails to meet demand) occurs at low work rates during cycling in patients with COPD, but not been described during walking. Walking is an important activity for many patients with COPD and is commonly prescribed in pragmatic outpatient pulmonary rehabilitation programmes. In this study we explored whether metabolic stress occurs during incremental walking at the low work rates these patients achieve. METHODS: Twenty-nine subjects with stable COPD [mean(SD) age 68(7)years, FEV(1) 50(19)% predicted] performed maximal cardiopulmonary exercise tests on a cycle ergometer and treadmill. Plasma ammonia concentration was measured at rest, 1 and 2min of exercise, peak exercise and 2min recovery. RESULTS: Subjects achieved mean(SD) cycle work rate of 57(20)W with VO(2max) 15.5(4.6)ml/min per kg, and treadmill distance 284(175)m with VO(2peak) 16.8(4.2)ml/min per kg. Plasma ammonia concentration rose significantly (p<0.001) with walking [mean(SEM) change 24.7(3.8)micromol/l] and cycling [mean(SEM) change 35.2(4.3)micromol/l], but peak exercise ammonia was lower in walking (p<0.01). In a subgroup of subjects (n=7) plasma ammonia did not rise during either cycling or walking despite similar lactate rise and peak exercise indices. CONCLUSION: Our data indicate that failure of muscle ATP re-synthesis to meet demand and development of metabolic stress can occur during walking in COPD patients at the low work rates these patients achieve. This may therefore be a factor contributing to exercise limitation independent of ventilatory limitation.


Subject(s)
Ammonia/blood , Exercise Test/methods , Exercise Tolerance/physiology , Muscle Fatigue/physiology , Pulmonary Disease, Chronic Obstructive/blood , Walking/physiology , Adenosine Triphosphate/metabolism , Aged , Bicycling , Biomarkers/blood , Female , Forced Expiratory Volume , Humans , Lactic Acid/blood , Male , Muscle, Skeletal/metabolism , Pulmonary Disease, Chronic Obstructive/physiopathology
3.
Eur Respir J ; 31(4): 751-8, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18094007

ABSTRACT

The plasma ammonia response to exercise in chronic obstructive pulmonary disease (COPD) was examined and the relationship between plasma ammonia concentration and muscle adenine nucleotide metabolism was explored. In total, 25 stable COPD patients and 13 similar-aged controls underwent incremental and constant-work rate cycle exercise tests. Arterialised venous blood was sampled at rest, at 1-min intervals during exercise and

Subject(s)
Ammonia/blood , Exercise Test/methods , Exercise Tolerance/physiology , Muscle Fatigue/physiology , Pulmonary Disease, Chronic Obstructive/blood , Adenine Nucleotides/metabolism , Aged , Aged, 80 and over , Biomarkers/blood , Biomarkers/metabolism , Case-Control Studies , Female , Humans , Male , Middle Aged , Pulmonary Disease, Chronic Obstructive/physiopathology , Quadriceps Muscle/metabolism
4.
Respir Med ; 100(6): 1058-63, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16257521

ABSTRACT

Respiratory failure is an important terminal event in muscular dystrophy, but increasingly is effectively treated by non-invasive ventilation. This study was designed to assess mortality statistics in this patient group in order to get an indication of future demand. Mortality data for all deaths from muscular dystrophy registered by death certification in England and Wales between 1993 and 1999 were analysed. In total, 817 deaths from muscular dystrophy were registered between 1993 and 1999. Annual number of deaths was unchanged over this period. Median age at death (interquartile range) for all cause muscular dystrophy increased from 20 (17-42.5) years in 1993, to 26 (17.5-63) years in 1999. Respiratory failure was the primary or contributory cause of death in 82% of cases. Two thirds of these deaths were during acute infection. We can expect 100 patients with muscular dystrophy to develop respiratory failure in England and Wales each year, so non-invasive ventilation services probably need to be able to provide for 0.2 new patients per 100,000 population annually. Respiratory services also need to provide adequate monitoring and early treatment of infection in these patients.


Subject(s)
Muscular Dystrophies/mortality , Adolescent , Adult , Cause of Death , Delivery of Health Care/trends , England/epidemiology , Female , Health Services Needs and Demand/organization & administration , Heart Diseases/complications , Heart Diseases/mortality , Humans , Logistic Models , Male , Middle Aged , Muscular Dystrophies/complications , Muscular Dystrophies/therapy , Respiratory Therapy/standards , Respiratory Tract Infections/complications , Respiratory Tract Infections/mortality , Risk , Survival Rate , Wales/epidemiology
6.
Proc Natl Acad Sci U S A ; 100(12): 6952-7, 2003 Jun 10.
Article in English | MEDLINE | ID: mdl-12756304

ABSTRACT

Among the micronutrients required by humans, zinc has particularly divergent modes of action. cDNA microarray and quantitative PCR technologies were used to investigate the zinc responsiveness of known genes that influence zinc homeostasis and to identify, through global screening, genes that may relate to phenotypic outcomes of altered dietary zinc intake. Human monocytic/macrophage THP-1 cells were either acutely zinc depleted, using a cell-permeable zinc-specific chelator, or were supplemented with zinc to alter intracellular zinc concentrations. Initially, genes associated with zinc homeostasis were evaluated by quantitative PCR to establish ranges for fold changes in transcript abundance that might be expected with global screening. Zinc transporter-1 and zinc transporter-7 expression increased when cellular zinc increased, whereas Zip-2 expression, the most zinc-responsive gene examined, was markedly increased by zinc depletion. Microarrays composed of approximately 22,000 elements were used to identify those genes responsive to either zinc depletion, zinc supplementation, or both conditions. Hierarchal clustering and ANOVA revealed that approximately 5% or 1,045 genes were zinc responsive. Further sorting based on this pattern of the zinc responsiveness of these genes into seven groups revealed that 104 genes were linearly zinc responsive in a positive mode (i.e., increased expression as cellular zinc increases) and 86 genes that were linearly zinc responsive in a negative mode (i.e., decreased expression as cellular zinc increases). Expression of some genes was responsive to only zinc depletion or supplementation. Categorization by function revealed numerous genes needed for host defense were among those identified as zinc responsive, including cytokine receptors and genes associated with amplification of the Th1 immune response.


Subject(s)
DNA-Binding Proteins , Gene Expression/drug effects , Macrophages/drug effects , Macrophages/metabolism , Monocytes/drug effects , Monocytes/metabolism , Zinc/metabolism , Zinc/pharmacology , Cell Line , Chelating Agents/pharmacology , Ethylenediamines/pharmacology , Gene Expression Profiling , Humans , Immediate-Early Proteins/genetics , Oligonucleotide Array Sequence Analysis , Tristetraprolin
7.
J Nutr ; 133(5 Suppl 1): 1521S-6S, 2003 05.
Article in English | MEDLINE | ID: mdl-12730457

ABSTRACT

Differential mRNA display and cDNA array analysis have identified zinc-regulated genes in small intestine, thymus and monocytes. The vast majority of the transcriptome is not influenced by dietary zinc intake, high or low. Of the genes that are zinc regulated, most are involved in signal transduction (particularly influencing the immune response), responses to stress and redox, growth and energy utilization. Among the genes identified are uroguanylin (UG), cholecystokinin, lymphocyte-specific protein tyrosine kinase (LCK), T-cell cytokine receptor, heat shock proteins and the DNA damage repair and recombination protein-23B. Zinc transporters (ZnT) help regulate the supply of this micronutrient to maintain cellular functions. Expression of ZnT-1 and -2 is regulated by dietary zinc in many organs including small intestine and kidney. ZnT-4 is ubiquitously expressed but is refractory to zinc intake. Expression of ZnT-1, -2 and -4 changes markedly during gestation and lactation from highly abundant to undetectable. Each ZnT has an endosomal-like appearance in the tissues examined. Upregulation of ZnT-1 and ZnT-2 by dietary zinc strongly implicates these transporters in zinc acquisition and/or storage for subsequent systemic needs. THP-1 cells were used as a model to examine the response of human cells to changes in zinc status. Based on mRNA quantities, Zip1 and ZnT-5 were the most highly expressed. Zinc depletion of these cells decreased expression of all transporters except Zip2, where expression increased markedly. Collectively, these findings provide a genomic footprint upon which to address the biological and clinical significance of zinc and new avenues for status assessment.


Subject(s)
Deficiency Diseases/genetics , Zinc/metabolism , Animals , Diet , Genomics , Genotype , Homeostasis , Humans , Intestinal Absorption , Lymphocyte Specific Protein Tyrosine Kinase p56(lck)/genetics , RNA, Messenger/genetics , Rats , Zinc/deficiency
8.
Theor Appl Genet ; 106(6): 1018-26, 2003 Apr.
Article in English | MEDLINE | ID: mdl-12671749

ABSTRACT

Rice hoja blanca virus (RHBV) is a major virus disease of economic importance affecting rice in northern South America, Central America and the Caribbean. This is the first report of transgenic resistance to RHBV and the transformation of an indica rice variety from Latin America. Rice transformed with the RHBV nucleocapsid protein ( N) gene had a significant reduction in disease development. Several reactions were observed that ranged from susceptible to completely resistant plants (immunity). The resistant reactions were characterized by the production of local lesions like a hypersensitive reaction or a recovery phenotype with the emergence of symptom-less new leaves. These transgenic RHBV-resistant rice lines expressed the N gene RNA at low levels that were below the detection limit by Northern blots and only resolved by RT-PCR. The nucleocapsid protein could not be detected in any of the transgenic plants either by Western or ELISA tests. These results suggest that the resistance encoded by the N gene in these plants appears to be mediated by RNA. When challenged with RHBV, the resistant transgenic lines showed a significant increased performance for important agronomic traits including the number of tillers, the number of grains per plant and the yield as compared to the susceptible control. Furthermore, upon inoculation some of the most-resistant transgenic lines showed agronomic traits similar to the uninoculated non-transgenic Cica 8 control. Using both agronomic traits and disease severity as criteria, several of the most-resistant lines were followed through the R(4) generation and demonstrated that the N gene and RHBV resistance was inherited in a stable manner. These transgenic rice lines could become a new genetic resource in developing RHBV-resistant cultivars.


Subject(s)
Capsid Proteins/genetics , Oryza/genetics , Oryza/virology , Plant Viruses/genetics , Capsid Proteins/metabolism , Oryza/metabolism , Plant Viruses/metabolism
9.
Am J Physiol Endocrinol Metab ; 282(6): E1197-203, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12006348

ABSTRACT

Cysteine-rich intestinal protein (CRIP), which contains a double zinc finger motif, is a member of the Group 2 LIM protein family. Our results showed that the developmental regulation of CRIP in neonates was not influenced by conventional vs. specific pathogen-free housing conditions. Thymic and splenic CRIP expression was not developmentally regulated. A line of transgenic (Tg) mice that overexpress the rat CRIP gene was created. When challenged with lipopolysaccharide, the Tg mice lost more weight, exhibited increased mortality, experienced greater diarrhea incidence, and had less serum interferon-gamma (IFN-gamma) and more interleukin (IL)-6 and IL-10. Similarly, splenocytes from the Tg mice produced less IFN-gamma and IL-2 and more IL-10 and IL-6 upon mitogen stimulation. Delayed-type hypersensitivity response was less in the Tg mice. Influenza virus infection produced greater weight loss in the Tg mice, which also showed delayed viral clearance. The observed responses to overexpression of the CRIP gene are consistent with a role for this LIM protein in a cellular pathway that produces an imbalance in cytokine pattern favoring Th2 cytokines.


Subject(s)
Carrier Proteins/genetics , Cytokines/biosynthesis , Gene Expression , Immunity , Animals , Carrier Proteins/physiology , Gene Expression Regulation, Developmental , Interferon-gamma/biosynthesis , Interferon-gamma/blood , Interleukin-10/biosynthesis , Interleukin-10/blood , Interleukin-2/biosynthesis , Interleukin-6/biosynthesis , Interleukin-6/blood , LIM Domain Proteins , Lipopolysaccharides/pharmacology , Mice , Mice, Transgenic , Orthomyxoviridae Infections/immunology , Orthomyxoviridae Infections/physiopathology , RNA, Messenger/analysis , Rats , Shock, Septic/immunology , Shock, Septic/physiopathology , Spleen/metabolism , Th2 Cells/immunology , Thymus Gland/metabolism , Transfection , Weight Loss , Zinc/blood
10.
Arch Virol ; 146(11): 2249-53, 2001.
Article in English | MEDLINE | ID: mdl-11765926

ABSTRACT

Tomato yellow mosaic was first described in 1963, as a disease caused by a geminivirus transmitted by the whitefly Bemisia tabaci in Venezuela. In 1981 and 1985, Tomato yellow mosaic virus (ToYMV) was reported to occasionally infect potato plants growing in the proximity of tomato plantings affected by this virus. Despite these previous reports, a virus isolated from yellow mosaic-affected potato plants in Venezuela, was described in 1986 as a "new geminivirus" called potato yellow mosaic virus (PYMV). In recent years, different geminiviruses related to PYMV have been described from tomato fields in Venezuela and other countries in the Caribbean Basin, including Panama. Comparative nucleotide and amino acid sequence analyses of a 1698 bp fragment amplified from the common region and part of the AV1 and AC1 ORFs of ToYMV from Venezuela, yielded 95.7% sequence identity with the corresponding regions of PYMV. Nucleotide and amino acid sequence identities between ToYMV and PYMV, were 96.3% and 95.1% for AC1, and 95.7% and 100% for AV1, respectively. The identity of the nucleotide sequence for the common region of ToYMV and PYMV was 96.5%. Comparative sequence analyses conducted with ToYMV and other tomato begomoviruses present in the Caribbean region, showed only distant relationships. It is concluded here that PYMV is a synonym of ToYMV.


Subject(s)
Geminiviridae/classification , Solanum lycopersicum/virology , Solanum tuberosum/virology
11.
P N G Med J ; 42(3-4): 126, 1999.
Article in English | MEDLINE | ID: mdl-11428495
12.
Clin Cancer Res ; 4(11): 2717-21, 1998 Nov.
Article in English | MEDLINE | ID: mdl-9829734

ABSTRACT

Most patients relapse after high-dose chemotherapy (HDCT) with autologous stem-cell transplantation (ASCT) for metastatic breast cancer. Further chemotherapy immediately after hematopoietic recovery from ASCT is not given for fear of irreversibly damaging the newly engrafted stem cells. In a pilot chemoprotection trial, autologous CD34+ cells from patients with metastatic breast cancer were exposed to a replication-incompetent retroviral vector carrying MDR-1 cDNA and then reinfused after HDCT. Immediately on recovery, patients received multiple courses of escalating dose paclitaxel. All of the 10 patients tolerated reinfusion of modified cells without any toxicity and had myeloid engraftment within 12 days (range, 11-14). The bone marrow cells of three patients contained vector MDR-1-positive cells only at the time of the first course of posttransplant paclitaxel, indicating that the MDR-1 vector-modified cells had only short-term engrafting potential. A total of 83 courses of paclitaxel were administered starting at a median of 30 (range, 21-32) days from ASCT. The median dose of paclitaxel was 225 mg/m2 and the median interval between paclitaxel cycles of therapy was 21 (range, 20-41) days. Five of the six CR patients were able to receive all of the 12 courses of paclitaxel. Three patients who had achieved less than a complete response to the HDCT (2 patients) and partial response (1 patient) were converted to complete clinical responses during the 12 cycles of paclitaxel. No delayed toxicity or bone marrow failure was noted in these patients with a median follow-up of 2 years from ASCT. This is the first study of chemotherapy immediately after transplantation with autologous CD34+ cells. These data indicate that paclitaxel can be safely administered immediately after ASCT without any delayed toxicities. Paclitaxel given immediately after ASCT can further improve the response to pretransplant chemotherapy in patients with advanced breast cancer.


Subject(s)
Antineoplastic Agents, Phytogenic/therapeutic use , Breast Neoplasms/therapy , Hematopoietic Stem Cell Transplantation , Paclitaxel/therapeutic use , ATP Binding Cassette Transporter, Subfamily B, Member 1/analysis , ATP Binding Cassette Transporter, Subfamily B, Member 1/genetics , Adult , Breast Neoplasms/drug therapy , Breast Neoplasms/pathology , Combined Modality Therapy , Hematopoietic Stem Cell Transplantation/adverse effects , Humans , Middle Aged , Paclitaxel/administration & dosage , Transplantation, Autologous
13.
J Gen Virol ; 78 ( Pt 8): 2101-11, 1997 Aug.
Article in English | MEDLINE | ID: mdl-9267014

ABSTRACT

Geminivirus isolates associated with the epidemic of severe cassava mosaic disease in Uganda were studied and compared with virus isolates from the part of Uganda outside the epidemic area, and with African cassava mosaic virus (ACMV) and East African cassava mosaic virus (EACMV). Isolates of a novel type [the Uganda variant (UgV)] were detected in severely affected plants from the epidemic area, whereas those from plants outside the epidemic area were typical of ACMV. The complete nucleotide sequences of DNA-A of UgV (2799 nt) and of a Tanzanian isolate of EACMV (2801 nt) were determined and are extremely similar, except for the coat protein (CP) gene. The CP gene of UgV has three distinct regions: the 5' 219 nt are 99% identical to EACMV (only 79% to ACMV); the following 459 nt are 99% identical to ACMV (75% to EACMV); and the 3' 93 nt are 98% identical to EACMV (76% to ACMV). UgV DNA-A therefore is considered to have arisen by interspecific recombination of EACMV and ACMV. Despite the hybrid nature of their CP, UgV isolates were indistinguishable from ACMV in tests with 20 monoclonal antibodies (MAbs), including seven which reacted with ACMV but not EACMV. The discontinuous epitopes detected by these seven MAbs must involve amino acids which lie in the central part of the CP (residues 74-226) and which differ in ACMV and EACMV. UgV isolates were detected in severely mosaic-affected plants from all 11 widely separated locations sampled. The probable role of recombination in geminivirus evolution in the short to medium term is discussed.


Subject(s)
DNA, Viral/chemistry , Geminiviridae/pathogenicity , Manihot/virology , Plant Diseases/virology , Recombination, Genetic , Base Sequence , Capsid/genetics , DNA Primers , DNA, Viral/genetics , Geminiviridae/genetics , Geminiviridae/isolation & purification , Introns , Molecular Sequence Data , Polymerase Chain Reaction , Sequence Alignment , Sequence Homology, Nucleic Acid , Uganda
14.
Virus Genes ; 15(3): 191-3, 1997.
Article in English | MEDLINE | ID: mdl-9482584

ABSTRACT

The sequences of RNA-3 and RNA-4 of rice hoja blanca tenuivirus isolates from Colombia and from Costa Rica were determined and analyzed. These isolates were 98.9% and 98.6% identical in the coding and non-coding regions of RNA-3, and 96.9 and 91.5% identical in the coding and non-coding regions of RNA-4, and are therefore strains of the same virus. There is about three times as much variation between isolates (based on consensus sequences) as there is within isolates (based on sequences of individual clones). There is also considerably more variation for RNA-4 (both between and within isolates) than there is for RNA-3, even though between tenivirus species RNA-3 has diverged more than RNA-4, implying that the evolution of the tenuivirus RNAs is not necessarily dependent on the amount of variation found for these RNAs.


Subject(s)
Oryza/virology , Plant Viruses/genetics , RNA Viruses/genetics , Colombia , Costa Rica , Genetic Variation , Plant Viruses/isolation & purification , RNA Viruses/isolation & purification , RNA, Viral
15.
J Gen Virol ; 77 ( Pt 3): 525-30, 1996 Mar.
Article in English | MEDLINE | ID: mdl-8601791

ABSTRACT

The genome of cassava common mosaic potexvirus (CsCMV) has been sequenced from cDNA clones and consists of 6376 nucleotides (nt). A 76 nt untranslated region (UTR) at the 5' terminus was followed by ORF1 which potentially encodes a protein of 1449 amino acids (aa). ORFs 2, 3, and 4 were predicted to encode proteins of 231, 112 and 97 aa, respectively. ORF5 potentially encodes a 229 aa protein of 25 kDa that is similar to the coat proteins of other potexviruses. The 3'-terminal UTR of 114 nt was followed by a poly(A) tail. The genomic organization of the CsCMV genome is similar to that of other potexviruses. A cDNA clone that was apparently obtained from a defective RNA species contained both the 5' and 3' UTRs and an ORF that potentially encodes the first 263 aa of ORF1 and the last 33 aa of the coat protein. Defective RNA species were found both in purified preparations of the virus and in total nucleic acid isolated from CsCMV-infected plants.


Subject(s)
Defective Viruses/genetics , Potexvirus/genetics , Amino Acid Sequence , Base Sequence , DNA, Viral , Defective Viruses/classification , Manihot/virology , Molecular Sequence Data , Plants, Toxic , Potexvirus/classification , RNA, Viral/genetics , RNA-Dependent RNA Polymerase/genetics , Nicotiana
16.
Blood ; 85(11): 3257-63, 1995 Jun 01.
Article in English | MEDLINE | ID: mdl-7756658

ABSTRACT

We collected peripheral blood mononuclear cells and bone marrow cells soon after recovery from conventional-dose chemotherapy-induced myelosuppression and transplanted these cells into advanced chronic myelogenous leukemia (CML) patients after treating these patients with 120 mg/kg cyclophosphamide, 750 mg/m2 VP-16, and 1,020 cGy of total body irradiation (TBI). Of the 10 late chronic-phase patients and the eight accelerated-phase CML patients evaluable posttransplant, 90% and 87%, respectively, remain alive posttransplant, whereas none of the three blast crisis CML patients given this therapy remain alive posttransplant. We measured the percentage of Philadelphia chromosome (Ph)-negative cells in the autologous cells collected after conventional-dose chemotherapy-induced myelosuppression before autologous transplant and in the marrow of these same CML patients after autologous transplantation of these cells into recipients treated with the cyclophosphamide, VP-16, and TBI. A direct correlation (correlation coefficient = 0.91) was observed between the level of Ph+ cells in the transplanted cells and the percentage of Ph+ marrow cells after transplant in 21 patients so transplanted. The data show that the chance of generating cytogenetic remissions post-transplant depends on the percentage of diploid cells in the preparations of autologous cells used for transplant and the stage of disease of the patients at the time of collection of the autologous cells.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/pharmacology , Bone Marrow Transplantation/pathology , Cyclophosphamide/pharmacology , Etoposide/pharmacology , Hematopoietic Stem Cells/drug effects , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/therapy , Neoplastic Stem Cells/drug effects , Philadelphia Chromosome , Adult , Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Blast Crisis/mortality , Blast Crisis/therapy , Cell Survival , Colony-Forming Units Assay , Combined Modality Therapy , Cyclophosphamide/administration & dosage , Daunorubicin/administration & dosage , Diploidy , Etoposide/administration & dosage , Female , Genetic Markers , Hematopoietic Stem Cells/radiation effects , Humans , Idarubicin/administration & dosage , Interferon-alpha/therapeutic use , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/drug therapy , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/mortality , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/pathology , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/radiotherapy , Leukemia, Myeloid, Accelerated Phase/mortality , Leukemia, Myeloid, Accelerated Phase/therapy , Leukemia, Myeloid, Chronic-Phase/mortality , Leukemia, Myeloid, Chronic-Phase/therapy , Male , Middle Aged , Mitoxantrone/administration & dosage , Neoplastic Stem Cells/radiation effects , Remission Induction , Survival Rate , Vidarabine/administration & dosage , Vidarabine/analogs & derivatives , Whole-Body Irradiation
17.
J Gen Virol ; 76 ( Pt 5): 1271-8, 1995 May.
Article in English | MEDLINE | ID: mdl-7730813

ABSTRACT

Cassava vein mosaic virus (CVMV) was found to be widespread throughout the north-eastern region of Brazil. The complete sequence of CVMV was determined, and the genome was 8158 bp in size. A cytosolic initiator methionine tRNA (tRNA met1)-binding site that probably acts as a primer for minus-strand synthesis was present. The genome contained five open reading frames that potentially encode proteins with predicted molecular masses of 186 kDa, 9 kDa, 77 kDa, 24 kDa and 26 kDa. The putative 186 kDa protein had regions with similarity to the zinc finger-like RNA-binding domain that is a common element in the capsid proteins and similarity to the intercellular transport domain of the plant pararetroviruses. The predicted 77 kDa protein had regions with similarity to aspartic proteases, reverse transcriptase and RNase H of pararetroviruses. This gene order was confirmed by the amplification of similar PCR products from total DNA extracted from CVMV-infected cassava plants. The genomic organization of CVMV was different from the organization of either the caulimoviruses or badnaviruses. In comparisons of the regions with the reverse transcriptase motif, CVMV was grouped between the caulimoviruses and badnaviruses. It appears that CVMV is distinct from the other well-characterized plant pararetroviruses.


Subject(s)
Caulimovirus/genetics , Manihot/virology , Amino Acid Sequence , Base Sequence , Caulimovirus/chemistry , DNA, Viral/analysis , Molecular Sequence Data , Open Reading Frames , Viral Proteins/analysis
18.
J Virol ; 69(3): 1951-4, 1995 Mar.
Article in English | MEDLINE | ID: mdl-7853540

ABSTRACT

Subgenomic RNAs of both polarities corresponding to rice hoja blanca virus (RHBV) ambisense RNA4 were detected in RHBV-infected rice tissues. Total RNA extracted from RHBV-infected and noninfected rice tissues and RNA4 purified from RHBV ribonucleoprotein particles were used as templates for primer extension studies. The RNAs extracted from RHBV-infected tissues contain a population of RNA molecules with 10 to 17 nonviral nucleotides at their 5' end. The RNA-cDNA hybrids resulting from primer extension of such RNA molecules were specifically immunoselected with anti-cap antibodies, indicating that the subgenomic RNAs are capped and probably serve as mRNAs and that the additional nucleotides at their 5' end possibly derive from host mRNAs via a cap-snatching mechanism.


Subject(s)
Plant Viruses/genetics , RNA Viruses/genetics , RNA, Viral/genetics , Base Sequence , DNA Primers/chemistry , Gene Expression Regulation, Viral , Molecular Sequence Data , Oryza/microbiology , RNA Caps , RNA, Messenger/genetics
19.
J Clin Oncol ; 13(3): 553-9, 1995 Mar.
Article in English | MEDLINE | ID: mdl-7884415

ABSTRACT

PURPOSE: To evaluate whether intensive chemotherapy followed by peripheral stem-cell (PSC) collections during early hematopoietic recovery results in a higher percentage of diploid cell collections in patients with Philadelphia chromosome (Ph)-positive chronic myelogenous leukemia (CML). PATIENTS AND METHODS: Fifty-five adults with Ph-positive CML received intensive chemotherapy with daunorubicin and high-dose cytarabine (ara-C) (DAUNO-HDAC; 26 patients) or fludarabine, high-dose ara-C, and mitoxantrone (FAM; 29 patients). Collections of the peripheral mononuclear cells were initiated when the WBC count was > or = 0.8 x 10(3)/microL. Simultaneous peripheral and marrow samples were subjected to cytogenetic studies. RESULTS: Thirty-eight of 55 patients (69%) were able to undergo the PSC collections. The rate of collection was higher in chronic phase (26 of 30 patients; 87%) than in accelerated (11 of 17; 65%) and blastic phases (1 of 8; 12%). Among the 30 patients in chronic phase, cytogenetic analyses of PSC showed cytogenetic responses (Ph-positive < 95%) in 60%, which were major (Ph < 35%) in 43% and complete (Ph = 0%) in 27%. Seven of 19 patients with simultaneous studies (37%; 23% of total) had a significantly lower percentage of Ph-positive cells in the peripheral collection compared with the marrow collection; one had the reverse phenomenon (5%; 3% of total). Cytogenetic responses were modest in both peripheral and marrow collections in CML accelerated and blastic phases. Myelosuppression-associated complications were frequent, resulting in febrile episodes in 76% of patients. CONCLUSION: PSC collection during early hematopoietic recovery from intensive chemotherapy allowed the collection of diploid-rich stem cells, mostly in chronic-phase CML. The approach could be used for in vivo purging before autologous stem-cell transplantation (ASCT).


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Bone Marrow/drug effects , Hematopoietic Stem Cells , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/drug therapy , Adolescent , Adult , Cell Separation/methods , Cytarabine/administration & dosage , Daunorubicin/administration & dosage , Diploidy , Female , Hematopoietic Stem Cell Transplantation , Humans , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/blood , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/therapy , Male , Middle Aged , Mitoxantrone/administration & dosage , Remission Induction , Vidarabine/administration & dosage , Vidarabine/analogs & derivatives
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