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1.
J Mol Graph Model ; 29(2): 206-13, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20655256

ABSTRACT

Glycerol is a byproduct produced in great quantity by biodiesel industries in transesterification reactions. Finding new applications for glycerol is a current concern of many research groups around the world. This work focuses on a theoretical investigation, at the B3LYP/6-31G* level of theory, into the possibility of using aluminum phthalocyanine (AlPc) and magnesium phthalocyanine (MgPc) in the modelling of catalysts to convert glycerol into alcohol, which has wider industrial applicability. According to our calculations there are strong interactions between the O-terminus of glycerol and the central metal atom of AlPc and MgPc. By applying the Fukui function, HSAB theory and analysis of the frontier molecular orbital, it was possible to explain the way in which glycerol interacts with AlPc and MgPc. As a result of these interactions, there is a considerable change in both electronic and geometric parameters of glycerol, which can be used in designing new strategies to convert glycerol into alcohol.


Subject(s)
Glycerol/chemistry , Indoles/chemistry , Magnesium/chemistry , Organometallic Compounds/chemistry , Hardness , Molecular Conformation , Thermodynamics
2.
SAR QSAR Environ Res ; 20(5-6): 537-49, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19916113

ABSTRACT

Some indolo[2,1-b]quinalozine (tryptanthrin) analogues present cytotoxic activity against human breast cancer cells. In this work, chemometric methods were applied in the search for building discriminant models between active and inactive analogues, based on the correlations among their in vitro cytotoxic activities and their electronic and geometric molecular descriptors. From 88 descriptors calculated with density functional theory with the exchange correlation functional B3LYP and the basis set 6-31G* (Gaussian 03), 29 were pre-selected based on their Fisher weights, and finally five descriptors (partial charge on atom 15, bond orders between atoms 12-13, 17-25 and 18-26, and energy difference between frontier molecular orbitals) were selected for principal component analysis. This analysis was able to discriminate 12 inactive from 22 active analogues by using only one principal component, accounting for 49% of the total variance and allowing us to better understand the influence of these electronic descriptors in the cytotoxic activity. In addition, a supervised partial least-squares discriminant model was build and successfully used to discriminate tryptanthrin analogues. The model was validated through an independent test set and considered robust to overfitting.


Subject(s)
Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Quantitative Structure-Activity Relationship , Quinazolines/chemistry , Quinazolines/pharmacology , Breast Neoplasms/drug therapy , Cell Line, Tumor , Computer Simulation , Female , Humans , Indoles/chemistry , Indoles/pharmacology , Inhibitory Concentration 50 , Principal Component Analysis
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