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1.
Dig Dis Sci ; 55(6): 1681-8, 2010 Jun.
Article in English | MEDLINE | ID: mdl-19731031

ABSTRACT

PURPOSE: Aseptic abscesses syndrome (AA) is an inflammatory disease in which non-infectious deep abscesses develop; these respond quickly to corticosteroids. AA is associated with Crohn disease (CD) in 57% of cases and with neutrophilic dermatosis (ND) in 20%. Pyoderma gangrenosum is usually a sporadic ND. A hereditary autosomal dominant syndromic kind of pyoderma gangrenosum, the PAPA syndrome, is linked to mutations in the CD2BP1/PSTPIP1 gene. We systematically screened this gene in French AA patients. RESULTS: One microsatellite (CCTG)n with 3 alleles was identified in the promoter. The longest form (CCTG)7 was significantly more frequent in AA patients than in French controls (P = 0.0154). We also found an association of the (CCTG)7 allele with CD in French patients (P = 0.0351). This association was not found in a sample of Indian patients. CONCLUSIONS: The CCTG repeat in the PSTPIP1 promoter may play a role in the pathogenesis of AA and of CD. Further investigations are required to demonstrate the possible modulation of gene expression by the (CCTG)n motif.


Subject(s)
Abscess/genetics , Adaptor Proteins, Signal Transducing/genetics , Crohn Disease/genetics , Cytoskeletal Proteins/genetics , Microsatellite Repeats , Promoter Regions, Genetic , Abscess/epidemiology , Adolescent , Adult , Animals , Base Sequence , Case-Control Studies , Child , Crohn Disease/epidemiology , Exons , Female , France/epidemiology , Gene Frequency , Genetic Association Studies , Genetic Testing , Humans , India/epidemiology , Introns , Male , Mice , Middle Aged , Molecular Sequence Data , Phenotype , Polymorphism, Single Nucleotide , Registries , Risk Assessment , Risk Factors , Syndrome , Young Adult
2.
PLoS One ; 4(12): e8318, 2009 Dec 15.
Article in English | MEDLINE | ID: mdl-20016818

ABSTRACT

BACKGROUND: In recent years, the phenotypes of leukodystrophies linked to mutations in the eukaryotic initiation factor 2B genes have been extended, classically called CACH/VWM (Childhood ataxia with cntral hypomyélination/vanishing white matter disorder). The large clinical spectrum observed from the more severe antenatal forms responsible for fetal death to milder adult forms with an onset after 16 years old and restricted to slow cognitive impairment have lead to the concept of eIF2B-related disorders. The typical MRI pattern with a diffuse CSF-like aspect of the cerebral white matter can lack particularly in the adult forms whereas an increasing number of patients with clinical and MRI criteria for CACH/VWM disease but without eIF2B mutations are found. Then we propose the use of biochemical markers to help in this difficult diagnosis. The biochemical diagnosis of eIF2B-related disorder is difficult as no marker, except the recently described asialotransferrin/transferrin ratio measured in cerebrospinal fluid, has been proposed and validated until now. Decreased eIF2B GEF activity has been previously reported in lymphoblastoid cell lines from 30 eIF2B-mutated patients. Our objective was to evaluate further the utility of this marker and to validate eIF2B GEF activity in a larger cohort as a specific diagnostic test for eIF2B-related disorders. METHODOLOGY/PRINCIPAL FINDINGS: We performed eIF2B GEF activity assays in cells from 63 patients presenting with different clinical forms and eIF2B mutations in comparison to controls but also to patients with defined leukodystrophies or CACH/VWM-like diseases without eIF2B mutations. We found a significant decrease of GEF activity in cells from eIF2B-mutated patients with 100% specificity and 89% sensitivity when the activity threshold was set at < or =77.5%. CONCLUSION: These results validate the measurement of eIF2B GEF activity in patients' transformed-lymphocytes as an important tool for the diagnosis of eIF2B-related disorders.


Subject(s)
Eukaryotic Initiation Factor-2B/metabolism , Guanine Nucleotide Exchange Factors/metabolism , Hereditary Central Nervous System Demyelinating Diseases/diagnosis , Adolescent , Adult , Age of Onset , Aging/pathology , Case-Control Studies , Child , Child, Preschool , Eukaryotic Initiation Factor-2B/genetics , Guanine Nucleotide Exchange Factors/genetics , Hereditary Central Nervous System Demyelinating Diseases/genetics , Humans , Infant , Lymphocytes/metabolism , Middle Aged , Mutation/genetics , ROC Curve , Young Adult
3.
Dig Dis Sci ; 53(2): 490-9, 2008 Feb.
Article in English | MEDLINE | ID: mdl-17570063

ABSTRACT

OBJECTIVES: NOD2/CARD15 is a susceptibility gene for Crohn's disease (CD). It is also involved, via different mutations, in the Blau syndrome. The syndrome of aseptic abscesses (AA) is characterized by visceral sterile collections of mature neutrophils that do not respond to antibiotics but regress quickly with corticosteroids. It is associated in two cases out of three with inflammatory bowel disease (IBD), and in particular with CD. We wanted to assess if changes on gene NOD2/CARD15 could contribute to the development of AA in patients with and without IBD. METHODS: Seventeen unrelated patients with AA from the French national register were genotyped for c.802C>T (p.Pro268Ser) and the three main CD associated variants, c.2104C>T (p.Arg702Trp), c.2722G>C (p.Gly908Arg) and c.3019_3020insC (p.Leu1007fsX1008), and 16 were screened for the 11 coding exons of NOD2/CARD15. RESULTS: The main variants associated with CD were found at a similar frequency in patients free of IBD and in those with CD. There was no significant difference in the main variants between patients with CD and those without IBD in our study and patients with CD and controls, respectively, from a large study of an ethnically similar population. No rare variant was found. A significant association between carriers of the silent variant c.1377 C>T and markers of severity of AA was observed. CONCLUSIONS: These results suggest that the emergence of AA is not closely related to gene NOD2/CARD15. NOD2/CARD15 and other susceptibility genes might enhance the expression of AA as the result of a combination of polymorphisms.


Subject(s)
Abdomen , Abscess/genetics , Crohn Disease/genetics , Nod2 Signaling Adaptor Protein/genetics , Adult , Female , Gene Frequency , Genetic Predisposition to Disease , Humans , Male , Middle Aged , Polymorphism, Genetic , Syndrome
4.
Virus Res ; 99(2): 147-55, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14749180

ABSTRACT

The complete nucleotide sequence of an enterovirus 77 isolate is reported. The virus designated FR/CF496-99 (France/Clermont-Ferrand 496-1999) was recovered from the feces of a 4-year-old child hospitalized for Salmonella gastroenteritis. The virus was identified by a molecular typing assay based on the genomic sequence encoding the VP1 capsid protein. The phylogenetic analysis based on the VP1 sequence demonstrated that the enterovirus isolated in the child clustered with viruses included in the human enterovirus B species (HEV-B) and was most closely related to enterovirus 77. A sliding window analysis of the complete genome showed an overall nucleotide similarity >80% between the P3 genomic region of the FR/CF496-99 isolate and that of the echovirus 30 prototype strain. A comparative analysis based on partial 3D(pol) sequences showed that the FR/CF496-99 virus was more closely related to recent enteroviruses from different serotypes and different geographical areas than to the prototype strains collected in the 1950s. This suggests that, in this enterovirus, the 3D(pol) encoding sequence is of recent origin.


Subject(s)
Enterovirus B, Human/genetics , Enterovirus B, Human/isolation & purification , Feces/virology , Genome, Viral , Capsid Proteins/chemistry , Capsid Proteins/genetics , Child, Preschool , DNA, Complementary , Enterovirus B, Human/classification , Evolution, Molecular , Humans , Male , Molecular Sequence Data , Phylogeny , RNA, Viral/chemistry , RNA, Viral/genetics , RNA, Viral/isolation & purification , Refugees , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid , Viral Nonstructural Proteins/chemistry , Viral Nonstructural Proteins/genetics , Yugoslavia
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