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1.
J Mech Med Biol ; 23(3)2023 Jan 28.
Article in English | MEDLINE | ID: mdl-37361026

ABSTRACT

The anterior and posterior iliac spine markers frequently used to define the pelvis, are commonly occluded during three-dimensional (3D) motion capture. The occlusion of these markers leads to the use of various tracking marker configurations on the pelvis, which affect kinematic results. The purpose of this investigation was to examine the agreement of CODA pelvis kinematic results when two different tracking marker configurations were used during roofing tasks. 3D motion data were collected on seven male subjects while mimicking two roofing tasks. Hip joint angles (HJAs) were computed using the CODA pelvis with two different tracking marker configurations, the trochanter tracking method (TTM), and virtual pelvis tracking method (VPTM). Agreement between tracking marker configurations was assessed using cross-correlations, bivariate correlations, mean absolute differences (MADs), and Bland-Altman (BA) plots. The correlations displayed no time lag and strong agreement (all r > 0.83) between the HJA from the VPTM and TTM, suggesting the timing occurrence of variables are comparable between the two tracking marker configurations. The MAD between the VPTM and TTM displayed magnitude differences, but most of the differences were within a clinically acceptable range. Caution should still be used when comparing kinematic results between various tracking marker configurations, as differences exist.

2.
Int J Ind Ergon ; 872022 Jan.
Article in English | MEDLINE | ID: mdl-35923901

ABSTRACT

Falls from residential roofs account for 80% of roofing industry fatalities. Furthermore, roofing work represents 44.7% of work in residual construction specialty trades and residential roofers count for 2.1% of overall workers in construction, with an anticipated growth in roofers of 14.9% by 2024. The purpose of the study was to evaluate the alterations in spatiotemporal gait parameters while traversing along a 6/12 pitched residential roof segment. Eighteen of the nineteen calculated spatiotemporal variables were statistically, significantly changed by walking across a 6/12 pitched simulated residential roof. The study clearly demonstrates that spatiotemporal gait variables increase and decrease while traversing across a residential roof. The changes in spatiotemporal parameters might suggest alterations to a person's balance system resulting in an increased risk of falling. The knowledge generated in the current study will be relevant to the residential roofing industry when it can be used in educational materials to increase awareness of how a roofer's altered gait while working on a pitched roof may increase their falling risk.

3.
Ergonomics ; 63(9): 1182-1193, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32436438

ABSTRACT

Awkward and extreme kneeling during roofing generates high muscular tension which can lead to knee musculoskeletal disorders (MSDs) among roofers. However, the combined impact of roof slope and kneeling posture on the activation of the knee postural muscles and their association to potential knee MSD risks among roofers have not been studied. The current study evaluated the effects of kneeling posture and roof slope on the activation of major knee postural muscles during shingle installation via a laboratory assessment. Maximum normalized electromyography (EMG) data were collected from knee flexor and extensor muscles of seven subjects, who mimicked the shingle installation process on a slope-configurable wooden platform. The results revealed a significant increase in knee muscle activation during simulated shingle installation on sloped rooftops. Given the fact that increased muscle activation of knee postural muscles has been associated with knee MSDs, roof slope and awkward kneeling posture can be considered as potential knee MSD risk factors. Practitioner Summary: This study demonstrated significant effects of roof slope and kneeling posture on the peak activation of knee postural muscles. The findings of this study suggested that residential roofers could be exposed to a greater risk of developing knee MSDs with the increase of roof slope during shingle installation due to increased muscle loading. Abbreviations: MSDs: musculoskeletal disorders; EMG: electromyography; ANOVA: analysis of variance; MNMA: maximum normalized muscle activation; RF: rectus femoris; VL: vastus lateralis; VM: vastus medialis; BF: biceps femoris; S: semitendinosus.


Subject(s)
Construction Industry , Knee/physiology , Muscle, Skeletal/physiology , Occupational Health , Posture/physiology , Work/physiology , Adult , Biomechanical Phenomena , Electromyography , Humans , Male , Task Performance and Analysis , Young Adult
4.
Saf Sci ; 1322020 Dec.
Article in English | MEDLINE | ID: mdl-34552309

ABSTRACT

Residential roofers have the highest rate of falls in the construction sector with injuries and fatalities costing billions of dollars annually. The sloped roof surface is the most predominant component within the residential roof work environment. Postural stability on a sloped work environment is not well studied. Calculating inclination angles (IAs) using the lateral ankle marker could be a quality measure to determine how cross-slope roof walking will influence stability. Will cross-slope roof-walking effect anterior-posterior (AP) and medial-lateral (ML) IAs in adult males? Eleven adult males participated in two testing sessions-level and cross-slope roof gait session on a 6/12 pitched roof segment. Changes in AP and ML IAs between conditions were compared at: heel strike (HS) and toe off (TO). Legs were analyzed separately due to the cross-slope walking. The left foot was 'higher' on the sloped roof and the right was 'lower.' Significant increases (p ≤ 0.006) in IAs were observed due to the sloped roof in all conditions except the AP 'lower' leg (p = 0.136). Increases in IA suggest a decrease in postural stability as the body will result in greater sway compared to a natural posture. Increases in AP IAs may cause slipping in the anterior or posterior direction as the normal force will decrease during HS and TO. In the ML direction, fall risk is increased and more stress is placed on the hip abductors in order to reduce falling. Thus traversing a sloped roof surface reduces stability of healthy workers and escalates injury/fall risk factors.

5.
Int J Ind Ergon ; 772020 May.
Article in English | MEDLINE | ID: mdl-33897076

ABSTRACT

Trunk musculoskeletal disorders are common among residential roofers. Addressing this problem requires a better understanding of the movements required to complete working tasks, such as affixing shingles on a sloped residential roof. We analyzed the extent to which the trunk kinematics during a shingling process are altered due to different angles of roof slope. Eight male subjects completed a kneeling shingle installation process on three differently sloped roof surfaces. The magnitude of the trunk kinematics was significantly influenced by both slope and task phase of the shingling process, depending on the metric. The results unequivocally point to roof slope and task phase as significant factors altering trunk kinematics. However, extension of the results to roofing workers should be done carefully, depending on the degree to which the study protocol represents the natural setting. Future studies on shingle installation in residential roofing should absolutely consider capturing a wider array of shingling procedures in order to encapsulate all the possible methods that are used due to the lack of a standardized procedure.

6.
Autom Constr ; 1192020 Nov.
Article in English | MEDLINE | ID: mdl-33897107

ABSTRACT

Field or laboratory data collected for work-related musculoskeletal disorder (WMSD) risk assessment in construction often becomes unreliable as a large amount of data go missing due to technology-induced errors, instrument failures or sometimes at random. Missing data can adversely affect the assessment conclusions. This study proposes a method that applies Canonical Polyadic Decomposition (CPD) tensor decomposition to fuse multiple sparse risk-related datasets and fill in missing data by leveraging the correlation among multiple risk indicators within those datasets. Two knee WMSD risk-related datasets-3D knee rotation (kinematics) and electromyography (EMG) of five knee postural muscles-collected from previous studies were used for the validation and demonstration of the proposed method. The analysis results revealed that for a large portion of missing values (40%), the proposed method can generate a fused dataset that provides reliable risk assessment results highly consistent (70%-87%) with those obtained from the original experimental datasets. This signified the usefulness of the proposed method for use in WMSD risk assessment studies when data collection is affected by a significant amount of missing data, which will facilitate reliable assessment of WMSD risks among construction workers. In the future, findings of this study will be implemented to explore whether, and to what extent, the fused dataset outperforms the datasets with missing values by comparing consistencies of the risk assessment results obtained from these datasets for further investigation of the fusion performance.

7.
Plant J ; 101(3): 666-680, 2020 02.
Article in English | MEDLINE | ID: mdl-31627246

ABSTRACT

Expansins comprise a superfamily of plant cell wall loosening proteins that can be divided into four individual families (EXPA, EXPB, EXLA and EXLB). Aside from inferred roles in a variety of plant growth and developmental traits, little is known regarding the function of specific expansin clades, for which there are at least 16 in flowering plants (angiosperms); however, there is evidence to suggest that some expansins have cell-specific functions, in root hair and pollen tube development, for example. Recently, two duckweed genomes have been sequenced (Spirodela polyrhiza strains 7498 and 9509), revealing significantly reduced superfamily sizes. We hypothesized that there would be a correlation between expansin loss and morphological reductions seen among highly adapted aquatic species. In order to provide an answer to this question, we characterized the expansin superfamilies of the greater duckweed Spirodela, the marine eelgrass Zostera marina and the bladderwort Utricularia gibba. We discovered rampant expansin gene and clade loss among the three, including a complete absence of the EXLB family and EXPA-VII. The most convincing correlation between morphological reduction and expansin loss was seen for Utricularia and Spirodela, which both lack root hairs and the root hair expansin clade EXPA-X. Contrary to the pattern observed in other species, four Utricularia expansins failed to branch within any clade, suggesting that they may be the result of neofunctionalization. Last, an expansin clade previously discovered only in eudicots was identified in Spirodela, allowing us to conclude that the last common ancestor of monocots and eudicots contained a minimum of 17 expansins.


Subject(s)
Magnoliopsida/genetics , Plant Proteins/genetics , Acclimatization , Environment , Evolution, Molecular , Magnoliopsida/physiology , Multigene Family
8.
J Biomech ; 96: 109333, 2019 Nov 11.
Article in English | MEDLINE | ID: mdl-31558308

ABSTRACT

Epidemiological studies indicate that occupational activities that require extended deep knee flexion or kneeling are associated with a higher prevalence of knee osteoarthritis. In many sport activities, such as a catcher in a baseball or a softball game, athletes have to make repetitive deep squatting motions, which have been associated with the development of osteochondritis dissecans. Excessive deep knee flexion postures may cause excessive loading in the knee joint. In deep knee flexion postures, the posterior aspect of the shank will contact the posterior thigh, resulting in a compressive force within the soft tissues. The current study was aimed at analyzing the effects of the posterior thigh/shank contact on the joint loading during deep knee flexion in a natural knee. An existing, whole body model with detailed anatomical components of the knee (AnyBody) has been adopted and modified for this study. The effects of the posterior thigh/shank contact were evaluated by comparing the results of the inverse dynamic analysis for two scenarios: with and without the posterior thigh/shank contact force. Our results showed that, in a deep squatting posture (knee flexion 120+ degrees), the posterior thigh/shank contact helps reduce the patellofemoral (PF) and tibiofemoral (TF) normal contact forces by 42% and 57%, respectively.


Subject(s)
Mechanical Phenomena , Models, Biological , Movement/physiology , Posture/physiology , Thigh/physiology , Biomechanical Phenomena , Humans , Knee/physiology , Male , Pressure , Weight-Bearing
9.
Int J Ind Ergon ; 742019 Nov.
Article in English | MEDLINE | ID: mdl-32327865

ABSTRACT

One factor commonly associated with musculoskeletal disorder risk is extreme postures. To lessen this risk, individuals must be in an as neutral posture as possible while working. We analyzed how the inclusion of different combinations of two interventions-knee pads and knee savers-can alter lower extremity kinematics during deep or near full flexion kneeling occurs while on different sloped surfaces. Nine male subjects were requested to keep a typical resting posture while kneeling on sloped roofing simulator. We observed that the introduction of a wearable third party device considerably altered lower extremity full flexion kneeling kinematics compared to level deep kneeling. This study provided a sound base for the use of third party devices to reduce musculoskeletal disorder risk on a sloped surface, however further testing with other musculoskeletal disorder risk factors is needed prior to conclusive recommendation.

10.
J Plant Res ; 129(2): 199-207, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26646380

ABSTRACT

Expansins form a superfamily of plant proteins that assist in cell wall loosening during growth and development. The superfamily is divided into four families: EXPA, EXPB, EXLA, and EXLB (Sampedro and Cosgrove in Genome Biol 6:242, 2005. doi: 10.1186/gb-2005-6-12-242 ). Previous studies on Arabidopsis, rice, and Populus trichocarpa have clarified the evolutionary history of expansins in angiosperms (Sampedro et al. in Plant J 44:409-419, 2005. doi: 10.1111/j.1365-313X.2005.02540.x ). Amborella trichopoda is a flowering plant that diverged very early. Thus, it is a sister lineage to all other extant angiosperms (Amborella Genome Project in 342:1241089, 2013. doi: 10.1126/science.1241089 ). Because of this relationship, comparing the A. trichopoda expansin superfamily with those of other flowering plants may indicate which expansin genes were present in the last common ancestor of all angiosperms. The A. trichopoda expansin superfamily was assembled using BLAST searches with angiosperm expansin queries. The search results were analyzed and annotated to isolate the complete A. trichopoda expansin superfamily. This superfamily is similar to other angiosperm expansin superfamilies, but is somewhat smaller. This is likely because of a lack of genome duplication events (Amborella Genome Project 2013). Phylogenetic and syntenic analyses of A. trichopoda expansins have improved our understanding of the evolutionary history of expansins in angiosperms. Nearly all of the A. trichopoda expansins were placed into an existing Arabidopsis-rice expansin clade. Based on the results of phylogenetic and syntenic analyses, we estimate there were 12-13 EXPA genes, 2 EXPB genes, 1 EXLA gene, and 2 EXLB genes in the last common ancestor of all angiosperms.


Subject(s)
Evolution, Molecular , Genome, Plant/genetics , Magnoliopsida/genetics , Multigene Family , Plant Proteins/genetics , Phylogeny , Sequence Analysis, DNA , Synteny
11.
Am J Sports Med ; 43(5): 1142-6, 2015 May.
Article in English | MEDLINE | ID: mdl-25670837

ABSTRACT

BACKGROUND: Currently, placement of the tibial tunnel for arthroscopic transtibial posterior cruciate ligament (PCL) reconstruction relies on a limited arthroscopic view of the native insertion or the use of intraoperative imaging. No widely accepted method exists for intraoperative determination of PCL tibial tunnel placement, and current descriptions are cumbersome. PURPOSE: To identify the center of the PCL's anatomic tibial insertion site as a percentage of the PCL facet length on a lateral radiograph of the knee so that it may be reliably located in the sagittal plane during surgical reconstruction. STUDY DESIGN: Descriptive laboratory study. METHODS: Twenty fresh-frozen cadaveric knees were dissected and the tibial insertions of the PCL were digitized with an optical tracing system. The digitized PCL footprints were mapped onto 3-dimensional computed tomography-acquired tibial models, and their center points were determined. A K-wire was then inserted into the center of the PCL's tibial insertion under direct visualization, a direct lateral radiograph was obtained, and the center point was measured. The center locations for both methods were defined as a percentage of PCL facet length from anterior and proximal to posterior and distal, and intraobserver and interobserver reliability was tested with 4 different observers. RESULTS: The average location of the PCL center on the 3-dimensional bone model method was 71.7%±5.6% along the PCL facet from anterior/proximal to posterior/distal. In the lateral radiographic method, the center of the PCL was at an average of 69.7%±4.9% of the facet length. There was no significant difference between the percentage measurements of the 2 methods (P=.13). Interobserver reliability (κ=0.57) and intraobserver reliability (κ=0.71) were moderate to strong. CONCLUSION: Locating the center of the tibial PCL insertion with fluoroscopy at a point that is 70% of the PCL tibial facet length on a true lateral radiograph is a reliable method for locating the PCL tibial insertion. CLINICAL RELEVANCE: The method described in this study enables clinicians to identify the tibial location of the PCL insertion, which must be accurately determined during PCL reconstruction.


Subject(s)
Fluoroscopy/methods , Knee Joint/surgery , Posterior Cruciate Ligament/surgery , Tibia/surgery , Aged , Cadaver , Humans , Middle Aged , Plastic Surgery Procedures/methods , Reproducibility of Results , Tomography, X-Ray Computed
12.
J Biomech Eng ; 136(4)2014 Apr.
Article in English | MEDLINE | ID: mdl-24337180

ABSTRACT

In this paper, we present a new methodology for subject-specific finite element modeling of the tibiofemoral joint based on in vivo computed tomography (CT), magnetic resonance imaging (MRI), and dynamic stereo-radiography (DSX) data. We implemented and compared two techniques to incorporate in vivo skeletal kinematics as boundary conditions: one used MRI-measured tibiofemoral kinematics in a nonweight-bearing supine position and allowed five degrees of freedom (excluding flexion-extension) at the joint in response to an axially applied force; the other used DSX-measured tibiofemoral kinematics in a weight-bearing standing position and permitted only axial translation in response to the same force. Verification and comparison of the model predictions employed data from a meniscus transplantation study subject with a meniscectomized and an intact knee. The model-predicted cartilage-cartilage contact areas were examined against "benchmarks" from a novel in situ contact area analysis (ISCAA) in which the intersection volume between nondeformed femoral and tibial cartilage was characterized to determine the contact. The results showed that the DSX-based model predicted contact areas in close alignment with the benchmarks, and outperformed the MRI-based model: the contact centroid predicted by the former was on average 85% closer to the benchmark location. The DSX-based FE model predictions also indicated that the (lateral) meniscectomy increased the contact area in the lateral compartment and increased the maximum contact pressure and maximum compressive stress in both compartments. We discuss the importance of accurate, task-specific skeletal kinematics in subject-specific FE modeling, along with the effects of simplifying assumptions and limitations.


Subject(s)
Femur/physiology , Finite Element Analysis , Knee Joint/diagnostic imaging , Knee Joint/physiology , Magnetic Resonance Imaging , Tibia/physiology , Tomography, X-Ray Computed , Biomechanical Phenomena , Female , Femur/diagnostic imaging , Humans , Precision Medicine , Tibia/diagnostic imaging , Weight-Bearing , Young Adult
13.
BMC Plant Biol ; 13: 4, 2013 Jan 03.
Article in English | MEDLINE | ID: mdl-23286898

ABSTRACT

BACKGROUND: Expansins are plant cell wall loosening proteins encoded by a large superfamily of genes, consisting of four families named EXPA, EXPB, EXLA, and EXLB. The evolution of the expansin superfamily is well understood in angiosperms, thanks to synteny-based evolutionary studies of the gene superfamily in Arabidopsis, rice, and Populus. Analysis of the expansin superfamily in the moss Physcomitrella patens revealed a superfamily without EXLA or EXLB genes that has evolved considerably and independently of angiosperm expansins. The sequencing of the Selaginella moellendorffii genome has allowed us to extend these analyses into an early diverging vascular plant. RESULTS: The expansin superfamily in Selaginella moellendorffii has now been assembled from genomic scaffolds. A smaller (and less diverse) superfamily is revealed, consistent with studies of other gene families in Selaginella. Selaginella has an expansin superfamily, which, like Physcomitrella, lacks EXLA or EXLB genes, but does contain two EXPA genes that are related to a particular Arabidopsis-rice clade involved in root hair development. CONCLUSIONS: From sequence-based phylogenetic analysis, most Selaginella expansins lie outside the Arabidopsis-rice clades, leading us to estimate the minimum number of expansins present in the last common ancestor of Selaginella and angiosperms at 2 EXPA genes and 1 EXPB gene. These results confirm Selaginella as an important intermediary between bryophytes and angiosperms.


Subject(s)
Bryophyta/genetics , Evolution, Molecular , Magnoliopsida/genetics , Plant Proteins/genetics , Selaginellaceae/genetics , Bryophyta/metabolism , Magnoliopsida/classification , Magnoliopsida/metabolism , Molecular Sequence Data , Multigene Family , Phylogeny , Plant Proteins/metabolism , Selaginellaceae/classification , Selaginellaceae/metabolism
14.
Ann Bot ; 99(6): 1131-41, 2007 Jun.
Article in English | MEDLINE | ID: mdl-17416912

ABSTRACT

BACKGROUND AND AIMS: Expansins are plant cell wall loosening proteins important in a variety of physiological processes. They comprise a large superfamily of genes consisting of four families (EXPA, EXPB, EXLA and EXLB) whose evolutionary relationships have been well characterized in angiosperms, but not in basal land plants. This work attempts to connect the expansin superfamily in bryophytes with the evolutionary history of this superfamily in angiosperms. METHODS: The expansin superfamily in Physcomitrella patens has been assembled from the Physcomitrella sequencing project data generated by the Joint Genome Institute and compared with angiosperm expansin superfamilies. Phylogenetic, motif, intron and distance analyses have been used for this purpose. KEY RESULTS: A gene superfamily is revealed that contains similar numbers of genes as found in arabidopsis, but lacking EXLA or EXLB genes. This similarity in gene numbers exists even though expansin evolution in Physcomitrella diverged from the angiosperm line approx. 400 million years ago. Phylogenetic analyses suggest that there were a minimum of two EXPA genes and one EXPB gene in the last common ancestor of angiosperms and Physcomitrella. Motif analysis seems to suggest that EXPA protein function is similar in bryophytes and angiosperms, but that EXPB function may be altered. CONCLUSIONS: The EXPA genes of Physcomitrella are likely to have maintained the same biochemical function as angiosperm expansins despite their independent evolutionary history. Changes seen at normally conserved residues in the Physcomitrella EXPB family suggest a possible change in function as one mode of evolution in this family.


Subject(s)
Bryopsida/genetics , Magnoliopsida/genetics , Plant Proteins/genetics , Bayes Theorem , Bryopsida/metabolism , Evolution, Molecular , Genes, Plant , Introns/genetics , Magnoliopsida/metabolism , Models, Genetic , Multigene Family , Phylogeny , Plant Proteins/classification , Plant Proteins/metabolism , Sequence Analysis, DNA
15.
J Plant Res ; 119(1): 11-21, 2006 Jan.
Article in English | MEDLINE | ID: mdl-16411016

ABSTRACT

Expansins comprise a superfamily of plant cell wall-loosening proteins that has been divided into four distinct families, EXPA, EXPB, EXLA and EXLB. In a recent analysis of Arabidopsis thaliana and Oryza sativa expansins, we proposed a further subdivision of the families into 17 clades, representing independent lineages in the last common ancestor of monocots and eudicots. This division was based on both traditional sequence-based phylogenetic trees and on position-based trees, in which genomic locations and dated segmental duplications were used to reconstruct gene phylogeny. In this article we review recent work concerning the patterns of expansin evolution in angiosperms and include additional insights gained from the genome of a second eudicot species, Populus trichocarpa, which includes at least 36 expansin genes. All of the previously proposed monocot-eudicot orthologous groups, but no additional ones, are represented in this species. The results also confirm that all of these clades are truly independent lineages. Furthermore, we have used position-based phylogeny to clarify the history of clades EXPA-II and EXPA-IV. Most of the growth of the expansin superfamily in the poplar lineage is likely due to a recent polyploidy event. Finally, some monocot-eudicot clades are shown to have diverged before the separation of the angiosperm and gymnosperm lineages.


Subject(s)
Evolution, Molecular , Genome, Plant , Pinus taeda/genetics , Plant Proteins/genetics , Populus/genetics , Arabidopsis/genetics , Expressed Sequence Tags , Gene Duplication , Introns , Multigene Family , Oryza/genetics , Phylogeny
16.
Plant J ; 44(3): 409-19, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16236151

ABSTRACT

Polyploidy events have played an important role in the evolution of angiosperm genomes. Here, we demonstrate how genomic histories can increase phylogenetic resolution in a gene family, specifically the expansin superfamily of cell wall proteins. There are 36 expansins in Arabidopsis and 58 in rice. Traditional sequence-based phylogenetic trees yield poor resolution below the family level. To improve upon these analyses, we searched for gene colinearity (microsynteny) between Arabidopsis and rice genomic segments containing expansin genes. Multiple rounds of genome duplication and extensive gene loss have obscured synteny. However, by simultaneously aligning groups of up to 10 potentially orthologous segments from the two species, we traced the history of 49 out of 63 expansin-containing segments back to the ancestor of monocots and eudicots. Our results indicate that this ancestor had 15-17 expansin genes, each ancestral to an extant clade. Some clades have strikingly different growth patterns in the rice and Arabidopsis lineages, with more than half of all rice expansins arising from two ancestral genes. Segmental duplications, most of them part of polyploidy events, account for 12 out of 21 new expansin genes in Arabidopsis and 16 out of 44 in rice. Tandem duplications explain most of the rest. We were also able to estimate a minimum of 28 gene deaths in the Arabidopsis lineage and nine in rice. This analysis greatly clarifies expansin evolution since the last common ancestor of monocots and eudicots and the method should be broadly applicable to many other gene families.


Subject(s)
Arabidopsis/genetics , Evolution, Molecular , Genome, Plant , Genomics/methods , Multigene Family/genetics , Oryza/genetics , Phylogeny , Amino Acid Sequence , Base Sequence , Chromosomes, Plant , Genes, Plant/genetics , Synteny
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