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1.
bioRxiv ; 2024 Jun 04.
Article in English | MEDLINE | ID: mdl-38895271

ABSTRACT

Photonic devices are cutting-edge optical materials that produce narrow, intense beams of light, but their synthesis typically requires toxic, complex methodology. Here we employ a synthetic biology approach to produce environmentally-friendly, living microlenses with tunable structural properties. We engineered Escherichia coli bacteria to display the silica biomineralization enzyme silicatein from aquatic sea sponges. Our silicatein-expressing bacteria can self-assemble a shell of polysilicate "bioglass" around themselves. Remarkably, the polysilicate-encapsulated bacteria can focus light into intense nanojets that are nearly an order of magnitude brighter than unmodified bacteria. Polysilicate-encapsulated bacteria are metabolically active for up to four months, potentially allowing them to sense and respond to stimuli over time. Our data demonstrate that engineered bacterial particles have the potential to revolutionize the development of multiple optical and photonic technologies.

2.
Opt Lett ; 48(17): 4424-4427, 2023 Sep 01.
Article in English | MEDLINE | ID: mdl-37656519

ABSTRACT

We demonstrate numerical refocusing in coherent confocal laser scanning microscopy based on synthetic optical holography. In this physics-based approach, computational propagation is implemented on the complex signal recovered in synthetic holography, consistent with wave physics and the parameters of the microscope. An experimental demonstration is shown to restore an in-focus image of a test object from data acquired at several focal plane off-sets. Numerical refocusing can provide focused views on samples with large height variation, with a potential application in confocal optical surface profiling.

3.
J Opt Soc Am A Opt Image Sci Vis ; 39(12): EW1-EW2, 2022 Dec 01.
Article in English | MEDLINE | ID: mdl-36520761

ABSTRACT

The groundbreaking research and ideas introduced by Emil Wolf continue to inspire researchers and motivate ongoing research in the wave properties of light. This special issue commemorates the legacy of Emil Wolf with research in physical optics, with specific focus on those areas where Wolf was active, such as optical coherence theory, inverse problems, singular optics, imaging, and polarization, and the intersection of these fields of study. Here we discuss the life of Emil Wolf and his influence on optical science and the optics community.


Subject(s)
Wolves , Animals , Optics and Photonics
4.
J Opt Soc Am A Opt Image Sci Vis ; 39(12): C203-C213, 2022 Dec 01.
Article in English | MEDLINE | ID: mdl-36520772

ABSTRACT

We present synthetic-phase-modulated interferometric synthetic aperture microscopy (SPM-ISAM), a method to perform 3D object reconstructions from data acquired with confocal broadband interferometric microscopy (BIM) that reconstructs images virtually free of coherent and depth-dependent defocus artifacts. This is achieved by implementing a sinusoidal SPM method in combination with an ISAM reconstruction algorithm that uses relatively low-modulation frequencies compared with acquisition frequencies. A theoretical framework and numerical results are provided here.


Subject(s)
Algorithms , Interferometry , Artifacts , Microscopy
5.
J Phys Chem C Nanomater Interfaces ; 126(23): 9777-9783, 2022 Jun 16.
Article in English | MEDLINE | ID: mdl-38476191

ABSTRACT

Chemical imaging combines the spatial specificity of optical microscopy with the spectral selectivity of vibrational spectroscopy. Mid-infrared (IR) absorption imaging instruments are now able to capture high-quality spectra with microscopic spatial detail, but the limits of their ability to resolve spatial and spectral objects remain less understood. In particular, the sensitivity of measurements to chemical and spatial changes and rules for optical design have been presented, but the influence of spectral information on spatial sensitivity is as yet relatively unexplored. We report an information theory-based approach to quantify the spatial localization capability of spectral data in chemical imaging. We explicitly consider the joint effects of the signal-to-noise ratio and spectral separation that have significance in experimental settings to derive resolution limits in IR spectroscopic imaging.

6.
J Opt Soc Am A Opt Image Sci Vis ; 38(11): ED4-ED5, 2021 Nov 01.
Article in English | MEDLINE | ID: mdl-34807035

ABSTRACT

Editor-in-Chief P. Scott Carney introduces the Journal's newest Topical Editors, John Schotland and Minchen Wei.

7.
J Phys Chem Lett ; 12(27): 6425-6430, 2021 Jul 15.
Article in English | MEDLINE | ID: mdl-34236195

ABSTRACT

We show that in metal-dielectric core-shell nanoparticles, unusually thick dielectric coatings can produce extreme fluorescence enhancement with an enhancement factor F̅ ≳ 3000 for emitters located on the surface or in the interior of the shell of Au@dielectric spherical particles under realistic conditions, even for the emitters with 100% intrinsic quantum yield. Thick dielectric coatings facilitate high-quality transverse electric (TE) multipole (l = 7) resonances which are shown as the major cause for the reported extraordinary values of F̅.

8.
J Opt Soc Am A Opt Image Sci Vis ; 38(5): ED2-ED3, 2021 May 01.
Article in English | MEDLINE | ID: mdl-33983282

ABSTRACT

JOSA A Editor-in-Chief P. Scott Carney, Feature Editor Johannes Courtial, and members of the 2020 Emerging Researcher Best Paper Prize Committee announce the recipient of the 2020 prize for the best paper published by an emerging researcher in the Journal.

9.
J Opt Soc Am A Opt Image Sci Vis ; 38(2): ED1, 2021 Feb 01.
Article in English | MEDLINE | ID: mdl-33690540

ABSTRACT

Editor-in-Chief P. Scott Carney introduces the Journal's newest Topical Editor, Angela Dudley.

10.
J Opt Soc Am A Opt Image Sci Vis ; 37(11): ED5, 2020 Nov 01.
Article in English | MEDLINE | ID: mdl-33175745

ABSTRACT

Editor-in-Chief P. Scott Carney introduces the Journal's newest Topical Editor, Arti Agrawal.

11.
J Opt Soc Am A Opt Image Sci Vis ; 37(9): ED4, 2020 Sep 01.
Article in English | MEDLINE | ID: mdl-32902436

ABSTRACT

JOSA A Editor-in-Chief P. Scott Carney and Feature Editor Johannes Courtial announce the recipient of the 2019 prize for the best paper published by an emerging researcher in the Journal.

12.
Opt Lett ; 45(14): 4056-4059, 2020 Jul 15.
Article in English | MEDLINE | ID: mdl-32667353

ABSTRACT

A potential control over the position of maxima of scattering and absorption cross sections can be exploited to better tailor nanoparticles for specific light-matter interaction applications. Here we explain in detail the mechanism of an appreciable blue shift of the absorption cross-section peak relative to a metal spherical particle localized surface plasmon resonance (LSPR) defined as the maximum of the extinction (and scattering) cross section. Such a branching of cross sections' maxima requires a certain threshold value of size parameter (x≈0.7 for dipole channel) and is a prerequisite for obtaining high fluorescence enhancements, because the spectral region of high radiative rate enhancement becomes separated from the spectral region of high non-radiative rate enhancement. A consequence is that the maximum of the absorption cross section cannot be used as the definition of the LSPR position for x≳0.7.

13.
J Opt Soc Am A Opt Image Sci Vis ; 37(7): ED2-ED3, 2020 Jul 01.
Article in English | MEDLINE | ID: mdl-32609682

ABSTRACT

Editor-in-Chief P. Scott Carney introduces the Journal's new Feature Editor and newest Topical Editor.

14.
Phys Chem Chem Phys ; 22(24): 13467-13473, 2020 Jun 24.
Article in English | MEDLINE | ID: mdl-32520027

ABSTRACT

Using the extended discrete interaction model and Mie theory, we investigate the tunability of the optical polarizability of small metallic nano-shells. We show that the spectral positions of symmetric and antisymmetric dipolar plasmon resonances vary with the ratio of particle radius to hole radius in a manner similar to one predicted for uniform metallic nano-shells using a semiclassical approach of two coupled harmonic oscillators. We show that, according to the extended discrete interaction model, the dipolar plasmon resonances are also present for nano-shells in the 2-13 nm size region and show the same functional dependence seen for larger nano-shells. Using previously fitted data from experiment, we can predict the size-dependence of the plasma frequency for nano-shells in the 1-15 nm size region. We find that Mie theory, which utilizes the electron mean free path correction for the permittivity, is not able to reproduce the same functional form of the dipolar modes for the nano-shells of the same sizes.

15.
J Opt Soc Am A Opt Image Sci Vis ; 37(2): ED1, 2020 Feb 01.
Article in English | MEDLINE | ID: mdl-32118898

ABSTRACT

Editor-in-Chief P. Scott Carney congratulates recent awardees and introduces the Journal's newest Topical Editor.

16.
Proc Natl Acad Sci U S A ; 117(7): 3388-3396, 2020 02 18.
Article in English | MEDLINE | ID: mdl-32015103

ABSTRACT

Optical microscopy for biomedical samples requires expertise in staining to visualize structure and composition. Midinfrared (mid-IR) spectroscopic imaging offers label-free molecular recording and virtual staining by probing fundamental vibrational modes of molecular components. This quantitative signal can be combined with machine learning to enable microscopy in diverse fields from cancer diagnoses to forensics. However, absorption of IR light by common optical imaging components makes mid-IR light incompatible with modern optical microscopy and almost all biomedical research and clinical workflows. Here we conceptualize an IR-optical hybrid (IR-OH) approach that sensitively measures molecular composition based on an optical microscope with wide-field interferometric detection of absorption-induced sample expansion. We demonstrate that IR-OH exceeds state-of-the-art IR microscopy in coverage (10-fold), spatial resolution (fourfold), and spectral consistency (by mitigating the effects of scattering). The combined impact of these advances allows full slide infrared absorption images of unstained breast tissue sections on a visible microscope platform. We further show that automated histopathologic segmentation and generation of computationally stained (stainless) images is possible, resolving morphological features in both color and spatial detail comparable to current pathology protocols but without stains or human interpretation. IR-OH is compatible with clinical and research pathology practice and could make for a cost-effective alternative to conventional stain-based protocols for stainless, all-digital pathology.


Subject(s)
Breast Neoplasms/diagnostic imaging , Optical Imaging/methods , Spectroscopy, Fourier Transform Infrared/methods , Breast/chemistry , Breast/diagnostic imaging , Breast/pathology , Breast Neoplasms/pathology , Computers , Female , Humans , Microscopy
17.
J Opt Soc Am A Opt Image Sci Vis ; 36(12): ED5-ED6, 2019 Dec 01.
Article in English | MEDLINE | ID: mdl-31873370

ABSTRACT

Editor-in-Chief P. Scott Carney introduces the Journal's newest Topical Editors, Irina V. Larina and Jonathan Petruccelli.

18.
J Opt Soc Am A Opt Image Sci Vis ; 36(10): ED4, 2019 Oct 01.
Article in English | MEDLINE | ID: mdl-31674426

ABSTRACT

Editor-in-Chief P. Scott Carney gives his thoughts on good writing for scientific publication.

19.
J Opt Soc Am A Opt Image Sci Vis ; 36(9): ED3, 2019 Sep 01.
Article in English | MEDLINE | ID: mdl-31503843

ABSTRACT

Editor-in-Chief P. Scott Carney introduces the Journal's newest Topical Editor, Svetlana Avramov-Zamurovic.

20.
J Opt Soc Am A Opt Image Sci Vis ; 36(9): 1591-1601, 2019 Sep 01.
Article in English | MEDLINE | ID: mdl-31503856

ABSTRACT

We obtain exact analytic expressions for (i) the electromagnetic energy radial density within and outside a multilayered sphere and (ii) the total electromagnetic energy stored within its core and each of its shells. Explicit expressions for the special cases of lossless core and shell are also provided. The general solution is based on the compact recursive transfer-matrix method, and its validity includes also magnetic media. The theory is illustrated on examples of electric field enhancement within various metallo-dielectric silica-gold multilayered spheres. The user-friendly MATLAB code, which includes the theoretical treatment, is available as a supplement to the paper.

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