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1.
Sci Rep ; 14(1): 5954, 2024 Mar 12.
Article in English | MEDLINE | ID: mdl-38467773

ABSTRACT

Managing private forests for wildfire resilience is challenging due to conflicting social, economic, and ecological decisions that may result in an increase of surface fuel loads leading to greater fire risk. Due to fire suppression and a changing climate, land managers in fire-prone regions face an increasing threat of high severity fires. Thus, land managers need fuel treatment options that match their forest types and management objectives. One potential option for producers that graze livestock is silvopasture management, where livestock, forages, and overstory vegetation are carefully managed for co-benefits on the same unit of land. This study compared forest composition and structure, fuel types, and vegetative biomass between silvopasture and non-grazed managed forests in Washington, U.S. We show that silvopasture management results in reductions in grass biomass, litter, and duff depth when compared to non-grazed managed forest. These findings point to the integrated nature of silvopasture, where management of overstory composition and structure, understory vegetation, and grazing can reduce fuel loads and potential wildfire risk.

2.
Microb Ecol ; 82(1): 135-144, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33580815

ABSTRACT

Quinoa (Chenopodium quinoa Willd.) is becoming an increasingly important food crop. Understanding the microbiome of quinoa and its relationships with soil microorganisms may improve crop yield potential or nutrient use efficiency. Whether quinoa is a host or non-host of a key soil symbiont, arbuscular mycorrhizal fungi (AMF), is suddenly up for debate with recent field studies reporting root colonization and presence of arbuscules. This research seeks to add evidence to the mycorrhizal classification of quinoa as we investigated additional conditions not previously explored in quinoa that may affect root colonization. A greenhouse study used six AMF species, two AMF commercial inoculant products, and a diverse set of 10 quinoa genotypes. Results showed 0 to 3% quinoa root colonization by AMF when grown under greenhouse conditions. Across quinoa genotypes, AMF inoculant affected shoot dry weight (p = 0.066) and height (p = 0.031). Mykos Gold produced greater dry biomass than Claroideoglomus eutunicatum (27% increase), Rhizophagus clarus (26% increase), and within genotype CQ119, the control (21% increase). No treatment increased plant height compared to control, but Funneliformis mosseae increased height compared to C. eutunicatum (25% increase) and Rhizophagus intraradices (25% increase). Although quinoa plants were minimally colonized by AMF, plant growth responses fell along the mutualism-parasitism continuum. Individual AMF treatments increased leaf greenness in quinoa genotypes 49ALC and QQ87, while R. clarus decreased greenness in CQ119 compared to the control. Our research findings support the recommendation to classify quinoa as non-mycorrhizal when no companion plant is present and inconsistently mycorrhizal when conditional colonization occurs.


Subject(s)
Chenopodium quinoa , Mycorrhizae , Biological Assay , Fungi , Mycorrhizae/genetics , Plant Roots
3.
Heliyon ; 6(11): e05475, 2020 Nov.
Article in English | MEDLINE | ID: mdl-33241149

ABSTRACT

The mechanism of arsenic (As) immobilization in soils is crucial for improving photosynthetic pigments and antioxidants in food crops. The effects of soil amendments with arbuscular mycorrhizal fungi (AMF), biochar (BC), selenium (Se), sulfur (S) and Si-gel on the concentrations of chlorophyll, carotenoid, proline, malondialdehyde (MDA), and the activity of ascorbate peroxidase (APX), guaiacol peroxidase (POD), and catalase (CAT) were studied in BARI pea (Pisum sativum ) under As stress. Soil amendments with AMF, Se, Si-gel and S enhanced chlorophyll a and total chlorophyll contents by 31-35% and 60-75%, respectively. Likewise, CAT activity was increased by 24-46% in BC, AMF, Se, Si-gel and S-treated pea, respectively. APX and POD activity was also found to be enriched with the treatment of BC, AMF and Se. In contrast, the content of MDA and proline was found lower than that of control in peas. These findings indicate that oxidative damage, osmotic stress and cell injury were possibly reduced in As-stressed peas. Particularly, AMF and Se both were comparatively more potential in comparison to BC. Thus, soil amendments with AMF, BC and Se are significantly important for improving antioxidant enzyme activity of food crops grown in soil with elevated As levels.

4.
Sci Rep ; 9(1): 18004, 2019 Nov 26.
Article in English | MEDLINE | ID: mdl-31768025

ABSTRACT

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

5.
Sci Rep ; 9(1): 9431, 2019 07 01.
Article in English | MEDLINE | ID: mdl-31263187

ABSTRACT

Arsenic (As) is a toxic metalloid. As phyto-toxicity is manifested by its accumulation in different tissue types and subsequent growth inhibition in plants. Despite the vital role of leguminous crops in providing proteins to human diets, a little is known about the As accumulation in lentil. In this study, the rate of As uptake and transport from soil to root, shoot and grain of lentil as well as associated risks with the consumption of As contaminated food were examined. Biomass accumulation of lentil genotypes pardina, red chief and precoz drastically decreased when treated with As at 6 mg kg-1 concentration in comparison to 0 and 3 mg kg-1 As. Quantification of As concentrations following different treatment periods showed that As accumulation in roots and shoots of 0, 3 and 6 mg kg-1 As-treated lentil genotypes was statistically different. Arsenic content in grains of red chief genotype was found significantly lower than pardina and precoz. Moreover, As transport significantly increased in roots and shoots compared to the grains. Due to the high concentrations of As in biomass of lentil genotypes, animal as well as human health risk might be associated with the consumption of the As contaminated legume crops.


Subject(s)
Arsenic/metabolism , Edible Grain/metabolism , Lens Plant/metabolism , Soil Pollutants/metabolism , Arsenic/toxicity , Biomass , Edible Grain/chemistry , Genotype , Lens Plant/chemistry , Lens Plant/drug effects , Lens Plant/genetics , Plant Roots/chemistry , Plant Roots/drug effects , Plant Roots/metabolism , Plant Shoots/chemistry , Plant Shoots/drug effects , Plant Shoots/metabolism , Soil Pollutants/chemistry , Soil Pollutants/toxicity
6.
PLoS One ; 14(5): e0211441, 2019.
Article in English | MEDLINE | ID: mdl-31095573

ABSTRACT

Arsenic (As) is a carcinogenic and hazardous substance that poses a serious risk to human health due to its transport into the food chain. The present research is focused on the As transport in different lentil genotypes and the role of Arbuscular Mycorrhizal Fungi (AMF) in mitigation of As phyto-toxicity. Arsenic transport from soil to root, shoot and grains in different lentil genotypes was analyzed by flow injection hydride generation atomic absorption spectrophotometry. AMF were applied for the reduction of As uptake as well as the improvement of plant growth in lentil genotypes. Arsenic phyto-toxicity was dose-dependent as evidenced by relatively higher shoot length, fresh and dry weight of root and shoot in 5 and 15 mgkg-1 As-treated lentil plants than that in 100 mgkg-1 As-treated lentil. Arsenic accumulation occurred in roots and shoots of all BARI-released lentil genotypes. Arsenic accumulation in grains was found higher in BARI Mashur 1 than other lentil genotypes. AMF treatment significantly increased growth and biomass accumulation in lentil compared to that in non-AMF plants. Furthermore, AMF effectively reduced the As concentrations in roots and shoots of lentil plants grown at 8 and 45 mgkg-1 As-contaminated soils. This study revealed remarkable divergence in As accumulation among different BARI-released lentil genotypes; however, AMF could reduce As uptake and mitigate As-induced phyto-toxicity in lentil. Taken together, our results suggest a great potential of AMF in mitigating As transfer in root and shoot mass and reallocation to grains, which would expand lentil cultivation in As-affected areas throughout the world.


Subject(s)
Arsenic/metabolism , Lens Plant/growth & development , Lens Plant/metabolism , Mycorrhizae/physiology , Biodegradation, Environmental , Genotype , Lens Plant/microbiology , Phosphorus/metabolism , Plant Roots/growth & development , Plant Roots/metabolism , Plant Roots/microbiology , Plant Shoots/growth & development , Plant Shoots/metabolism , Plant Shoots/microbiology , Soil Pollutants/metabolism
7.
Front Physiol ; 10: 193, 2019.
Article in English | MEDLINE | ID: mdl-30930785

ABSTRACT

Environmental perturbations alter biochemical compounds in food crops. Arsenic (As), a toxic metalloid, is known to affect the cultivation of food crops in many regions of the world; however, the changes in chlorophyll, catalase (CAT), and proline in response to As stress and the role of stress relief substances remain largely unknown in mung bean (Vigna radiate L.). In this study, biochar (BC), arbuscular mycorrhizal fungi (AMF), and selenium (Se) were applied to soils as stress relief substances (under 30 mg kg-1 As stress), and the effects of BC, AMF, and Se on chlorophyll a, chlorophyll b, total chlorophyll, CAT activity, and proline content were studied in different mung bean genotypes. Under As stress, the chlorophyll a, chlorophyll b, and total chlorophyll contents in BARI mung 3, BARI mung 5, and BARI mung 8 were found statistically similar. Meanwhile, CAT activity increased in comparison to the control due to the application of BC, AMF, and Se in mung bean crops. However, proline was found significantly lower in AMF, BC, and Se-treated mung bean. This indicates that oxidative stress was potentially minimized in As-stressed mung bean crops due to the application of these stress relief substances. Notably, AMF was relatively effective against As stress in comparison to BC and Se. It is concluded that BC, AMF, and Se are all highly effective in enhancing antioxidant defenses as well as the nutritional quality of mung bean crops under As stress.

8.
Front Plant Sci ; 9: 1239, 2018.
Article in English | MEDLINE | ID: mdl-30233608

ABSTRACT

Herbivore suppression is mediated by both plant defenses and predators. In turn, plant defenses are impacted by soil fertility and interactions with soil bacteria. Measuring the relative importance of nutritional and microbial drivers of herbivore resistance has proven problematic, in part because it is difficult to manipulate soil-bacterial community composition. Here, we exploit variation in soil fertility and microbial biodiversity across 20 farms to untangle suppression of aphids (Brevicoryne brassicae) through bottom-up and top-down channels. We planted Brassica oleracea plants in soil from each farm, manipulated single and dual infestations of aphids alone or with caterpillars (Pieris rapae), and exposed aphids to parasitoid wasps (Diaeretiella rapae) in the open field. We then used multi-model inference to identify the strongest soil-based predictors of herbivore growth and parasitism. We found that densities of Bacillus spp., a genus known to include plant-growth-promoting rhizobacteria, negatively correlated with aphid suppression by specialist parasitoids. Aphid parasitism also was disrupted on plants that had caterpillar damage, compared to plants attacked only by aphids. Relative abundance of Pseudomonas spp. bacteria correlated with higher aphid growth, although this appeared to be a direct effect, as aphid parasitism was not associated with this group of bacteria. Non-pathogenic soil bacteria are often shown to deliver benefits to plants, improving plant nutrition and the deployment of anti-herbivore defenses. However, our results suggest that these plant growth-promoting bacteria may also indirectly weaken top-down aphid suppression by parasitoids and directly improve aphid performance. Against a background of varying soil fertility, microbial biodiversity, competing herbivores, and natural enemies, we found that effects of non-pathogenic soil microbes on aphid growth outweighed those of nutritional factors. Therefore, predictions about the strength of plant defenses along resource gradients must be expanded to include microbial associates.

9.
PLoS One ; 5(9)2010 Sep 01.
Article in English | MEDLINE | ID: mdl-20824185

ABSTRACT

BACKGROUND: Sale of organic foods is one of the fastest growing market segments within the global food industry. People often buy organic food because they believe organic farms produce more nutritious and better tasting food from healthier soils. Here we tested if there are significant differences in fruit and soil quality from 13 pairs of commercial organic and conventional strawberry agroecosystems in California. METHODOLOGY/PRINCIPAL FINDINGS: At multiple sampling times for two years, we evaluated three varieties of strawberries for mineral elements, shelf life, phytochemical composition, and organoleptic properties. We also analyzed traditional soil properties and soil DNA using microarray technology. We found that the organic farms had strawberries with longer shelf life, greater dry matter, and higher antioxidant activity and concentrations of ascorbic acid and phenolic compounds, but lower concentrations of phosphorus and potassium. In one variety, sensory panels judged organic strawberries to be sweeter and have better flavor, overall acceptance, and appearance than their conventional counterparts. We also found the organically farmed soils to have more total carbon and nitrogen, greater microbial biomass and activity, and higher concentrations of micronutrients. Organically farmed soils also exhibited greater numbers of endemic genes and greater functional gene abundance and diversity for several biogeochemical processes, such as nitrogen fixation and pesticide degradation. CONCLUSIONS/SIGNIFICANCE: Our findings show that the organic strawberry farms produced higher quality fruit and that their higher quality soils may have greater microbial functional capability and resilience to stress. These findings justify additional investigations aimed at detecting and quantifying such effects and their interactions.


Subject(s)
Agriculture/methods , Fragaria/chemistry , Organic Agriculture , Soil/analysis , Carbon/analysis , Fragaria/genetics , Fragaria/growth & development , Fruit/chemistry , Fruit/growth & development , Nitrogen/analysis , Plant Extracts/analysis
10.
ISME J ; 4(9): 1099-107, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20376100

ABSTRACT

Relationships between soil microbial diversity and soil function are the subject of much debate. Process-level analyses have shown that microbial function varies with soil type and responds to soil management. However, such measurements cannot determine the role of community structure and diversity in soil function. The goal of this study was to investigate the role of gene frequency and diversity, measured by microarray analysis, on soil processes. The study was conducted in an agro-ecosystem characterized by contrasting management practices and soil types. Eight pairs of adjacent commercial organic and conventional strawberry fields were matched for soil type, strawberry variety, and all other environmental conditions. Soil physical, chemical and biological analyses were conducted including functional gene microarrays (FGA). Soil physical and chemical characteristics were primarily determined by soil textural type (coarse vs fine-textured), but biological and FGA measures were more influenced by management (organic vs conventional). Organically managed soils consistently showed greater functional activity as well as FGA signal intensity (SI) and diversity. Overall FGA SI and diversity were correlated to total soil microbial biomass. Functional gene group SI and/or diversity were correlated to related soil chemical and biological measures such as microbial biomass, cellulose, dehydrogenase, ammonium and sulfur. Management was the dominant determinant of soil biology as measured by microbial gene frequency and diversity, which paralleled measured microbial processes.


Subject(s)
Agriculture/methods , Biota , Genetic Variation , Metagenome , Soil Microbiology , Soil/analysis , Cellulose/metabolism , DNA/genetics , DNA/isolation & purification , Fragaria , Metabolic Networks and Pathways/genetics , Microarray Analysis , Quaternary Ammonium Compounds/metabolism , Sulfur/metabolism
11.
Bioresour Technol ; 101(14): 5658-66, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20202833

ABSTRACT

Biodynamic (BD) agriculture, a form of organic agriculture, includes the use of specially fermented preparations, but peer-reviewed studies on their efficacy are rare. Composting of a grape pomace and manure mixture was studied in two years (2002 and 2005) with and without the BD compost preparations. Water extracts of finished composts were then used to fertigate wheat seedlings, with and without added inorganic fertilizer. BD-treated mixtures had significantly greater dehydrogenase activity than did untreated (control) mixtures during composting, suggesting greater microbial activity in BD-treated compost. In both years there was a distinct compost effect on wheat shoot and root biomass irrespective of supplemental fertilizer. Shoot biomass was highest in all treatments receiving 1% compost extract. Wheat seedlings that received 1% compost extract in 2005 grew similar root and shoot biomass as fertilized seedlings, despite only containing 30% as much nitrogen as the fertilizer treatment. In both years seedlings that received fertilizer plus 1% compost extract produced 22-61% more shoot biomass and 40-66% more root biomass than seedlings that received fertilizer alone, even at higher rates. In 2002 a 1% extract of BD compost grew 7% taller wheat seedlings than did 1% extract of untreated compost. At 0.1% only BD extract grew taller plants than water, but in 2002 only. No effect on shoot or root biomass was seen at 0.1%. Our results support the use of compost extracts as fertilizer substitutes or supplements, testimonial reports on the growth promoting effects of compost extracts, and the occasional superiority of BD compost to untreated compost.


Subject(s)
Seedlings/growth & development , Soil , Triticum/genetics , Biological Assay , Biomass , Biotechnology/methods , Fertilization , Fertilizers , Manure , Nitrogen/chemistry , Oxygen/chemistry , Plant Roots/metabolism , Quaternary Ammonium Compounds/chemistry , Time Factors , Vitis
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