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1.
Int J Mol Sci ; 24(3)2023 Jan 20.
Article in English | MEDLINE | ID: mdl-36768387

ABSTRACT

Anastrepha spp. (Diptera: Tephritidae) infestations cause significant economic losses in commercial fruit production worldwide. However, some plants quickly counteract the insertion of eggs by females by generating neoplasia and hindering eclosion, as is the case for Persea americana Mill., cv. Hass (Hass avocados). We followed a combined transcriptomics/metabolomics approach to identify the molecular mechanisms triggered by Hass avocados to detect and react to the oviposition of the pestiferous Anastrepha ludens (Loew). We evaluated two conditions: fruit damaged using a sterile pin (pin) and fruit oviposited by A. ludens females (ovi). We evaluated both of the conditions in a time course experiment covering five sampling points: without treatment (day 0), 20 min after the treatment (day 1), and days 3, 6, and 9 after the treatment. We identified 288 differentially expressed genes related to the treatments. Oviposition (and possibly bacteria on the eggs' surface) induces a plant hypersensitive response (HR), triggering a chitin receptor, producing an oxidative burst, and synthesizing phytoalexins. We also observed a process of cell wall modification and polyphenols biosynthesis, which could lead to polymerization in the neoplastic tissue surrounding the eggs.


Subject(s)
Magnoliopsida , Persea , Tephritidae , Animals , Female , Oviposition , Tephritidae/genetics , Fruit
2.
Ann Bot ; 131(1): 171-184, 2023 02 07.
Article in English | MEDLINE | ID: mdl-35390125

ABSTRACT

BACKGROUND AND AIMS: Hybridization is a common and important force in plant evolution. One of its outcomes is introgression - the transfer of small genomic regions from one taxon to another by hybridization and repeated backcrossing. This process is believed to be common in glacial refugia, where range expansions and contractions can lead to cycles of sympatry and isolation, creating conditions for extensive hybridization and introgression. Polyploidization is another genome-wide process with a major influence on plant evolution. Both hybridization and polyploidization can have complex effects on plant evolution. However, these effects are often difficult to understand in recently evolved species complexes. METHODS: We combined flow cytometry, analyses of transcriptomic sequences and pollen tube growth assays to investigate the consequences of polyploidization, hybridization and introgression on the recent evolution of several Erysimum (Brassicaceae) species from the South of the Iberian Peninsula, a well-known glacial refugium. This species complex differentiated in the last 2 million years, and its evolution has been hypothesized to be determined mainly by polyploidization, interspecific hybridization and introgression. KEY RESULTS: Our results support a scenario of widespread hybridization involving both extant and 'ghost' taxa. Several taxa studied here, most notably those with purple corollas, are polyploids, probably of allopolyploid origin. Moreover, hybridization in this group might be an ongoing phenomenon, as pre-zygotic barriers appeared weak in many cases. CONCLUSIONS: The evolution of Erysimum spp. has been determined by hybridization to a large extent. Species with purple (polyploids) and yellow flowers (mostly diploid) exhibit a strong signature of introgression in their genomes, indicating that hybridization occurred regardless of colour and across ploidy levels. Although the adaptive value of such genomic exchanges remains unclear, our results demonstrate the significance of hybridization for plant diversification, which should be taken into account when studying plant evolution.


Subject(s)
Brassicaceae , Erysimum , Hybridization, Genetic , Polyploidy , Europe , Phylogeny
3.
Sci Rep ; 12(1): 16907, 2022 10 07.
Article in English | MEDLINE | ID: mdl-36207443

ABSTRACT

The internal transcribed spacers (ITS) exhibit concerted evolution by the fast homogenization of these sequences at the intragenomic level. However, the rate and extension of this process are unclear and might be conditioned by the number and divergence of the different ITS copies. In some cases, such as hybrid species and polyploids, ITS sequence homogenization appears incomplete, resulting in multiple haplotypes within the same organism. Here, we studied the dynamics of concerted evolution in 85 individuals of seven plant species of the genus Erysimum (Brassicaceae) with multiple ploidy levels. We estimated the rate of concerted evolution and the degree of sequence homogenization separately for ITS1 and ITS2 and whether these varied with ploidy. Our results showed incomplete sequence homogenization, especially for polyploid samples, indicating a lack of concerted evolution in these taxa. Homogenization was usually higher in ITS2 than in ITS1, suggesting that concerted evolution operates more efficiently on the former. Furthermore, the hybrid origin of several species appears to contribute to the maintenance of high haplotype diversity, regardless of the level of ploidy. These findings indicate that sequence homogenization of ITS is a dynamic and complex process that might result in varying intra- and inter-genomic diversity levels.


Subject(s)
Brassicaceae , Erysimum , DNA, Ribosomal Spacer , Evolution, Molecular , Haplotypes/genetics , Humans , Phylogeny , Polyploidy
4.
Front Physiol ; 13: 991923, 2022.
Article in English | MEDLINE | ID: mdl-36304579

ABSTRACT

Climate change, particularly global warming, is disturbing biological processes in unexpected ways and forcing us to re-study/reanalyze the effects of varying temperatures, among them extreme ones, on insect functional traits such as lifespan and fecundity/fertility. Here we experimentally tested, under both laboratory and field conditions, the effects of an extreme range of temperatures (5, 10, 15, 20, 30, 40, and 45 °C, and the naturally varying conditions experienced in the field), on survivorship/lifespan, fecundity, and fertility of four pestiferous fruit fly species exhibiting contrasting life histories and belonging to two phylogenetic groups within the genus Anastrepha: A. ludens, A. obliqua, A. striata, and A. serpentina. In the field, we also measured the length of the entire life cycle (egg to adult), and in one species (A. ludens), the effect on the latter of the host plant (mango and grapefruit). Under laboratory conditions, none of the adults, independent of species, could survive a single day when exposed to a constant temperature of 45 °C, but A. striata and A. serpentina females/males survived at the highly contrasting temperatures of 5 and 40 °C at least 7 days. Maximum longevity was achieved in all species at 15 °C (375, 225, 175 and 160 days in A. ludens, A. serpentina, A. striata and A. obliqua females, respectively). Anastrepha ludens layed many eggs until late in life (368 days) at 15 °C, but none eclosed. Eclosion was only observed in all species at 20 and 30 °C. Under natural conditions, flies lived ca. 100 days less than in the laboratory at 15 °C, likely due to the physiological cost of dealing with the highly varying environmental patterns over 24 h (minimum and maximum temperatures and relative humidity of ca. 10-40 °C, and 22-100%, respectively). In the case of A. ludens, the immature's developmental time was shorter in mango, but adult survival was longer than in grapefruit. We discuss our results considering the physiological processes regulating the traits measured and tie them to the increasing problem of global warming and its hidden effects on the physiology of insects, as well as the ecological and pest management implications.

5.
Annu Int Conf IEEE Eng Med Biol Soc ; 2021: 6643-6646, 2021 11.
Article in English | MEDLINE | ID: mdl-34892631

ABSTRACT

In previous work, we developed an exoskeleton (HandSOME II) that allows movement at 15 hand degrees of freedom (DOF) and is intended for take-home use. An activity tracking device was developed in order to track index finger movement with a pair of magnetometers and magnet. The goal was to detect grip attempts by the individual. Machine learning was utilized to estimate angles for metacarpophalangeal (MCP) and proximal interphalangeal (PIP) joints at the index finger. Testing was performed with healthy control and individuals with stroke.Clinical Relevance- This device and method of data collection during daily activities might be useful for stroke rehabilitation and compliance with home-based therapy programs.


Subject(s)
Exoskeleton Device , Stroke Rehabilitation , Wearable Electronic Devices , Hand , Humans , Range of Motion, Articular
6.
Article in English | MEDLINE | ID: mdl-34478375

ABSTRACT

In previous work, we developed an exoskeleton, Hand Spring Operated Movement Enhancer (HandSOME II), that allows movement at 15 hand degrees of freedom (DOF). Eleven separate elastic elements can be added to customize the extension assistance for individuals with impaired hand function. In this pilot study of twelve individuals with stroke, we measured the immediate improvements in range of motion (ROM) and upper extremity function when wearing the device. Index finger ROM was significantly improved at the PIP (p=.01) and DIP joints (p=.026), and the max extension was significantly increased at the MCP (p<.001), PIP (p=.013) and DIP joints (p=.016). The thumb CMC abduction max (p=.017) and CMC flexion/extension ROM also increased (p=.04). In a grip and release task involving various objects, six subjects were unable to complete the tasks without assistance. Across these 6 subjects, 13 of 42 tasks were completed without assistance, while 36 of 42 tasks were completed when wearing HandSOME II. Despite the extension assistance provided by the device, flexion grip force was not statistically decreased. HandSOME II can potentially increase the effectiveness of repetitive task practice in patients with moderate-severe hand impairment by allowing completion of grasp and release tasks that are impossible to complete unassisted.


Subject(s)
Exoskeleton Device , Stroke Rehabilitation , Wearable Electronic Devices , Hand , Hand Strength , Humans , Pilot Projects , Range of Motion, Articular
7.
J Insect Sci ; 21(4)2021 Jul 01.
Article in English | MEDLINE | ID: mdl-34436597

ABSTRACT

Worker division of labor is a defining trait in social insects. Many species are characterized by having behavioral flexibility where workers perform non-typical tasks for their age depending on the colony's needs. Worker division of labor and behavioral flexibility were examined in the little fire ant Wasmannia auropunctata (Roger, 1863), for which age-related division of labor has been found. Young workers perform nursing duties which include tending of brood and queens, and colony defense, while older workers forage. When nurses were experimentally removed from the colony, foragers were observed carrying out nursing and colony defense duties, yet when foragers were removed nurses did not forage precociously. We also administered juvenile hormone analog, methoprene, to workers. When methoprene was applied, foragers increased their nursing and defense activities while nurses became mainly idle. The behavioral flexibility of foragers of the little fire ant may be evidence of an expansion of worker's repertoires as they age; older workers can perform tasks they have already done in their life while young individuals are not capable of performing tasks ahead of time. This may be an important adaptation associated with the success of this ant as an invasive species.


Subject(s)
Ants , Juvenile Hormones , Social Behavior , Animals , Ants/drug effects , Ants/physiology , Introduced Species , Juvenile Hormones/pharmacology , Juvenile Hormones/physiology , Methoprene/pharmacology
8.
Front Neurorobot ; 15: 773477, 2021.
Article in English | MEDLINE | ID: mdl-34975447

ABSTRACT

We have developed a passive and lightweight wearable hand exoskeleton (HandSOME II) that improves range of motion and functional task practice in laboratory testing. For this longitudinal study, we recruited 15 individuals with chronic stroke and asked them to use the device at home for 1.5 h per weekday for 8 weeks. Subjects visited the clinic once per week to report progress and troubleshoot problems. Subjects were then given the HandSOME II for the next 3 months, and asked to continue to use it, but without any scheduled contact with the project team. Clinical evaluations and biomechanical testing was performed before and after the 8 week intervention and at the 3 month followup. EEG measures were taken before and after the 8 weeks of training to examine any recovery associated brain reorganization. Ten subjects completed the study. After 8 weeks of training, functional ability (Action Research Arm Test), flexor tone (Modified Ashworth Test), and real world use of the impaired limb (Motor Activity Log) improved significantly (p < 0.05). Gains in real world use were retained at the 3-month followup (p = 0.005). At both post-training and followup time points, biomechanical testing found significant gains in finger ROM and hand displacement in a reaching task (p < 0.05). Baseline functional connectivity correlated with gains in motor function, while changes in EEG functional connectivity paralleled changes in motor recovery. HandSOME II is a low-cost, home-based intervention that elicits brain plasticity and can improve functional motor outcomes in the chronic stroke population.

9.
Article in English | MEDLINE | ID: mdl-35419565

ABSTRACT

Impaired use of the hand in functional tasks remains difficult to overcome in many individuals after a stroke. This often leads to compensation strategies using the less-affected limb, which allows for independence in some aspects of daily activities. However, recovery of hand function remains an important therapeutic goal of many individuals, and is often resistant to conventional therapies. In prior work, we developed HEXORR I, a robotic device that allows practice of finger and thumb movements with robotic assistance. In this study, we describe modifications to the device, now called HEXORR II, and a clinical trial in individuals with chronic stroke. Fifteen individuals with a diagnosis of chronic stroke were randomized to 12 or 24 sessions of robotic therapy. The sessions involved playing several video games using thumb and finger movement. The robot applied assistance to extension movement that was adapted based on task performance. Clinical and motion capture evaluations were performed before and after training and again at a 6-month followup. Fourteen individuals completed the protocol. Fugl-Meyer scores improved significantly at the 6 month time point compared to baseline, indicating reductions in upper extremity impairment. Flexor hypertonia (Modified Ashworth Scale) also decreased significantly due to the intervention. Motion capture found increased finger range of motion and extension ability after the intervention that continued to improve during the followup period. However, there was no change in a functional measure (Action Research Arm Test). At the followup, the high dose group had significant gains in hand displacement during a forward reach task. There were no other significant differences between groups. Future work with HEXORR II should focus on integrating it with functional task practice and incorporating grip and squeezing tasks.

10.
Annu Int Conf IEEE Eng Med Biol Soc ; 2020: 4867-4872, 2020 07.
Article in English | MEDLINE | ID: mdl-33019080

ABSTRACT

We have developed HandMATE (Hand Movement Assisting Therapy Exoskeleton); a wearable motorized hand exoskeleton for home-based movement therapy following stroke. Each finger and the thumb is powered by a linear actuator which provides flexion and extension assistance. Force sensitive resistors integrated into the design measure grasp and extension initiation force. An assistive therapy mode is based on an admittance control strategy. We evaluated our control system via subject and bench testing. Errors during a grip force tracking task while using the HandMATE were minimal (<1%) and comparable to unassisted healthy hand performance. We also outline a dedicated app we have developed for optimal use of HandMATE at home. The exoskeleton communicates wirelessly with an Android tablet which features guided exercises, therapeutic games and performance feedback. We surveyed 5 chronic stroke patients who used the HandMATE device to further evaluate our system, receiving positive feedback on the exoskeleton and integrated app.


Subject(s)
Exoskeleton Device , Robotic Surgical Procedures , Stroke Rehabilitation , Wearable Electronic Devices , Hand , Humans
11.
Technol Disabil ; 32(4): 285-294, 2020.
Article in English | MEDLINE | ID: mdl-34421288

ABSTRACT

BACKGROUND: Dynamic exoskeleton orthoses provide assistance needed to complete movements that would otherwise be impossible after stroke. Beyond the demonstration of their effectiveness, the subjective experience of dynamic orthoses also needs to be considered. OBJECTIVE: To support functional recovery after stroke through the development of Hand-TaPS (Task Practice after Stroke), an instrument to evaluate dynamic hand orthoses in home therapy. METHODS: Dynamic hand orthosis subject matter experts (N = 14), professionals and consumers, considered the items of PYTHEIA, a valid and reliable instrument merging well-tested, assistive technology (AT) assessment items with those tuned to the greater complexity of emerging technologies. Experts reflected on how each item aligned with their personal experience of dynamic orthosis use. Interpretative Phenomenological Analysis guided identification of themes. RESULTS: Four themes (5/20 items) appraised highly relevant for Hand-TaPS. The remaining eight themes (15/20 items) were deemed in need of modification. CONCLUSIONS: Dynamic hand orthoses constitute a special case of AT; the assistance they provide targets therapy, not ADLs. Our work to develop Hand-TaPS provides a clear example of the theoretical difference between rehabilitative and assistive technology and underscores the importance of consideration of how a device is used in its assessment.

12.
IEEE Int Conf Rehabil Robot ; 2019: 317-322, 2019 06.
Article in English | MEDLINE | ID: mdl-31374649

ABSTRACT

Low impedance and torque control are critical for movement rehabilitation using robotic exoskeletons. A grounded 3 degree of freedom shoulder exoskeleton was designed for movement assistance in shoulder abduction/adduction, flexion/extension, and shoulder internal/external rotation. Two series elastic actuators designs were developed using a linear spring arrangement with a global nonlinear stiffness behavior. RMS errors during application of constant torque were less than.06 Nm in shoulder add/abd and less than.04 Nm in arm rotation as the limb was moved in sinusoidal trajectories up to 3.5 Hz. For abd/adduction, the step response rise time was.05 s, and free mode impedance peaked at.007 Nm/deg during 3.5 Hz oscillations. For arm rotation, the step response rise time was.03 s, and impedance peaked at.023 Nm/deg during 3.5 Hz oscillations. Both SEA designs had performance measurements that were similar to other SEA designs in terms of torque tracking, but with much lower impedance than previously reported.


Subject(s)
Equipment Design , Exoskeleton Device , Movement , Range of Motion, Articular , Rotation , Shoulder , Biomechanical Phenomena , Humans
13.
Geriatr., Gerontol. Aging (Online) ; 13(1): 11-16, jan-mar.2019. tab
Article in Portuguese | LILACS | ID: biblio-1005543

ABSTRACT

OBJETIVO: Avaliar a adesão ao tratamento medicamentoso e possíveis fatores associados em idosos entrevistados durante consultas realizadas em Unidades Básicas de Saúde. MÉTODO: Trata-se de um estudo transversal, de base populacional, com amostra de 57 pacientes com idade entre 60 e 99 anos, residentes do município de Ponto dos Volantes, Minas Gerais, incluindo as zonas rural e urbana. A coleta de dados se deu durante o ato da consulta médica, através de um roteiro eletrônico estruturado. A associação entre os parâmetros e o nível de adesão ao tratamento foi avaliada através do teste do χ2, com intervalo de confiança de 95%. RESULTADOS: Dos idosos entrevistados, 45 (78,9%) responderam sobre adesão ao tratamento. Desses, 11 (24,4%) foram enquadrados no grupo de baixa aderência. Dentre os parâmetros avaliados, nenhum apresentou associação estatística relevante com a classificação da adesão medicamentosa. CONCLUSÃO: O presente estudo identificou que um em cada quatro pacientes apresentava baixa adesão aos tratamentos medicamentosos. Dentre as variáveis estudadas, notadamente sexo, idade, escolaridade, número de comorbidades, número de medicações em uso e renda, não se observou relação estatisticamente significante.


OBJECTIVE: To evaluate adherence to medication treatment and possible associated factors in elderly patients interviewed during medical appointments in primary care units. METHOD: This was a cross-sectional, population-based study of 57 older patients aged 60 to 99 years living in the municipality of Ponto dos Volantes, state of Minas Gerais, including rural and urban areas. Data were collected during medical appointments, using a structured electronic script. The association between the parameters and the level of adherence to treatment was assessed using the χ2 test, with a 95% confidence interval. RESULTS: Among the elderly patients interviewed, 45 (78.9%) responded about adherence to treatment. Of these, 11 (24.4%) were included in the low adherence group. None " of the parameters evaluated showed a statistically significant association with the classification of drug adherence. CONCLUSION: The present study identified that 1 in every 4 patients had low adherence to drug treatment. Among the variables studied, notably sex, age, schooling, number of comorbidities, number of medications, and income, no statistically significant relationship was observed.


Subject(s)
Humans , Male , Female , Middle Aged , Aged , Aged, 80 and over , Medication Adherence/statistics & numerical data , Treatment Adherence and Compliance/psychology , Treatment Adherence and Compliance/statistics & numerical data , Health Services for the Aged , Health of the Elderly , Surveys and Questionnaires , Age Factors
14.
IEEE Trans Robot ; 35(6): 1464-1474, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31929766

ABSTRACT

Movement impairments resulting from neurologic injuries, such as stroke, can be treated with robotic exoskeletons that assist with movement retraining. Exoskeleton designs benefit from low impedance and accurate torque control. We designed a 2 degree-of-freedom tethered exoskeleton that can provide independent torque control on elbow flexion/extension and forearm supination/pronation. Two identical series elastic actuators (SEAs) are used to actuate the exoskeleton. The two SEAs are coupled through a novel cable-driven differential. The exoskeleton is compact and lightweight, with a mass of 0.9 kg. Applied RMS torque errors were less than 0.19 Nm. Benchtop tests demonstrated a torque rise time of approximately 0.1 s, a torque control bandwidth of 3.7 Hz and an impedance of less than 0.03 Nm/deg at 1 Hz. The controller can simulate a stable maximum wall stiffness of 0.45 Nm/deg. The overall performance is adequate for robotic therapy applications and the novelty of the design is discussed.

15.
Sci Rep ; 8(1): 17404, 2018 11 27.
Article in English | MEDLINE | ID: mdl-30479362

ABSTRACT

Chloroplast genomes (cp genomes) are widely used in comparative genomics, population genetics, and phylogenetic studies. Obtaining chloroplast genomes from RNA-Seq data seems feasible due to the almost full transcription of cpDNA. However, the reliability of chloroplast genomes assembled from RNA-Seq instead of genomic DNA libraries remains to be thoroughly verified. In this study, we assembled chloroplast genomes for three Erysimum (Brassicaceae) species from three RNA-Seq replicas and from one genomic library of each species, using a streamlined bioinformatics protocol. We compared these assembled genomes, confirming that assembled cp genomes from RNA-Seq data were highly similar to each other and to those from genomic libraries in terms of overall structure, size, and composition. Although post-transcriptional modifications, such as RNA-editing, may introduce variations in the RNA-seq data, the assembly of cp genomes from RNA-seq appeared to be reliable. Moreover, RNA-Seq assembly was less sensitive to sources of error such as the recovery of nuclear plastid DNAs (NUPTs). Although some precautions should be taken when producing reference genomes in non-model plants, we conclude that assembling cp genomes from RNA-Seq data is a fast, accurate, and reliable strategy.


Subject(s)
Genome, Chloroplast , Sequence Analysis, RNA/methods , Erysimum/genetics , Reproducibility of Results , Sequence Analysis, RNA/standards
16.
Glob Chang Biol ; 24(9): 4069-4083, 2018 09.
Article in English | MEDLINE | ID: mdl-29768696

ABSTRACT

Climatic dryness imposes limitations on vascular plant growth by reducing stomatal conductance, thereby decreasing CO2 uptake and transpiration. Given that transpiration-driven water flow is required for nutrient uptake, climatic stress-induced nutrient deficit could be a key mechanism for decreased plant performance under prolonged drought. We propose the existence of an "isohydric trap," a dryness-induced detrimental feedback leading to nutrient deficit and stoichiometry imbalance in strict isohydric species. We tested this framework in a common garden experiment with 840 individuals of four ecologically contrasting European pines (Pinus halepensis, P. nigra, P. sylvestris, and P. uncinata) at a site with high temperature and low soil water availability. We measured growth, survival, photochemical efficiency, stem water potentials, leaf isotopic composition (δ13 C, δ18 O), and nutrient concentrations (C, N, P, K, Zn, Cu). After 2 years, the Mediterranean species Pinus halepensis showed lower δ18 O and higher δ13 C values than the other species, indicating higher time-integrated transpiration and water-use efficiency (WUE), along with lower predawn and midday water potentials, higher photochemical efficiency, higher leaf P, and K concentrations, more balanced N:P and N:K ratios, and much greater dry-biomass (up to 63-fold) and survival (100%). Conversely, the more mesic mountain pine species showed higher leaf δ18 O and lower δ13 C, indicating lower transpiration and WUE, higher water potentials, severe P and K deficiencies and N:P and N:K imbalances, and poorer photochemical efficiency, growth, and survival. These results support our hypothesis that vascular plant species with tight stomatal regulation of transpiration can become trapped in a feedback cycle of nutrient deficit and imbalance that exacerbates the detrimental impacts of climatic dryness on performance. This overlooked feedback mechanism may hamper the ability of isohydric species to respond to ongoing global change, by aggravating the interactive impacts of stoichiometric imbalance and water stress caused by anthropogenic N deposition and hotter droughts, respectively.


Subject(s)
Climate Change , Pinus/physiology , Plant Stomata/physiology , Water/metabolism , Longevity , Nutrients/metabolism , Pinus/growth & development , Spain
17.
Neuroimage Clin ; 17: 659-666, 2018.
Article in English | MEDLINE | ID: mdl-29204344

ABSTRACT

INTRODUCTION: HIV infection is known to be associated with brain volume loss, even in optimally treated patients. In this study, we assessed whether dynamic brain volume changes over time are predictive of neurobehavorial performance in the HIV-1 transgenic (Tg) rat, a model of treated HIV-positive patients. MATERIALS AND METHODS: Cross-sectional brain MRI imaging was first performed comparing Tg and wild type (WT) rats at 3 and 19 months of age. Longitudinal MRI and neurobehavioral testing of another group of Tg and WT rats was then performed from 5 to 23 weeks of age. Whole brain and subregional image segmentation was used to assess the rate of brain growth over time. We used repeated-measures mixed models to assess differences in brain volumes and to establish how predictive the volume differences are of specific neurobehavioral deficits. RESULTS: Cross-sectional imaging showed smaller whole brain volumes in Tg compared to WT rats at 3 and at 19 months of age. Longitudinally, Tg brain volumes were smaller than age-matched WT rats at all time points, starting as early as 5 weeks of age. The Tg striatal growth rate delay between 5 and 9 weeks of age was greater than that of the whole brain. Striatal volume in combination with genotype was the most predictive of rota-rod scores and in combination with genotype and age was the most predictive of total exploratory activity scores in the Tg rats. CONCLUSION: The disproportionately delayed striatal growth compared to whole brain between 5 and 9 weeks of age and the role of striatal volume in predicting neurobehavioral deficits suggest an important role of the dopaminergic system in HIV associated neuropathology. This might explain problems with motor coordination and executive decisions in this animal model. Smaller brain and subregional volumes and neurobehavioral deficits were seen as early as 5 weeks of age, suggesting an early brain insult in the Tg rat. Neuroprotective therapy testing in this model should thus target this early stage of development, before brain damage becomes irreversible.


Subject(s)
Brain/pathology , HIV Infections/complications , HIV Infections/pathology , Mental Disorders/etiology , Mental Disorders/pathology , Animals , Behavior, Animal , HIV-1 , Magnetic Resonance Imaging , Male , Rats , Rats, Transgenic
18.
New Phytol ; 215(1): 469-478, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28382619

ABSTRACT

Because establishing a new population often depends critically on finding mates, individuals capable of uniparental reproduction may have a colonization advantage. Accordingly, there should be an over-representation of colonizing species in which individuals can reproduce without a mate, particularly in isolated locales such as oceanic islands. Despite the intuitive appeal of this colonization filter hypothesis (known as Baker's law), more than six decades of analyses have yielded mixed findings. We assembled a dataset of island and mainland plant breeding systems, focusing on the presence or absence of self-incompatibility. Because this trait enforces outcrossing and is unlikely to re-evolve on short timescales if it is lost, breeding system is especially likely to reflect the colonization filter. We found significantly more self-compatible species on islands than mainlands across a sample of > 1500 species from three widely distributed flowering plant families (Asteraceae, Brassicaceae and Solanaceae). Overall, 66% of island species were self-compatible, compared with 41% of mainland species. Our results demonstrate that the presence or absence of self-incompatibility has strong explanatory power for plant geographical patterns. Island floras around the world thus reflect the role of a key reproductive trait in filtering potential colonizing species in these three plant families.


Subject(s)
Asteraceae/physiology , Brassicaceae/physiology , Reproduction, Asexual , Solanaceae/physiology , Islands
19.
New Phytol ; 214(4): 1527-1536, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28262955

ABSTRACT

Seed dormancy is expected to provide ecological advantages by adjusting germination to the favorable growth period. However, many species produce nondormant seeds, particularly in wet tropical forests, a biogeographic pattern that is not well accounted for in current models. We hypothesized that the global distribution of dormant seeds derives from their adaptive value in predictably fluctuating (i.e. seasonal) environments. However, the advantage conferred by dormancy might ultimately depend on other seed attributes, particularly size. This general model was tested within a phylogenetically informed framework using a data set comprising > 216 000 world-wide observations of Fabaceae, spanning three orders of magnitude in seed size and including both dormant and nondormant seeds. Our results confirmed our hypothesis: nondormant seeds can only evolve in climates with long growing seasons and/or in lineages that produce larger seeds. Conversely, dormancy should be evolutionarily stable in temperate lineages with small seeds. When the favorable season is fleeting, seed dormancy is the only adaptive strategy. Based on these results, we predict that, within a given lineage, taxa producing larger, nondormant seeds will necessarily predominate in aseasonal environments, while plants bearing small, dormant seeds will be dominant under short growing seasons.


Subject(s)
Fabaceae/physiology , Plant Dormancy/physiology , Seeds/physiology , Biological Evolution , Germination , Phylogeography , Seasons , Seeds/anatomy & histology
20.
PLoS Comput Biol ; 12(10): e1005139, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27736874

ABSTRACT

Evolutionary and ecosystem dynamics are often treated as different processes -operating at separate timescales- even if evidence reveals that rapid evolutionary changes can feed back into ecological interactions. A recent long-term field experiment has explicitly shown that communities of competing plant species can experience very fast phenotypic diversification, and that this gives rise to enhanced complementarity in resource exploitation and to enlarged ecosystem-level productivity. Here, we build on progress made in recent years in the integration of eco-evolutionary dynamics, and present a computational approach aimed at describing these empirical findings in detail. In particular we model a community of organisms of different but similar species evolving in time through mechanisms of birth, competition, sexual reproduction, descent with modification, and death. Based on simple rules, this model provides a rationalization for the emergence of rapid phenotypic diversification in species-rich communities. Furthermore, it also leads to non-trivial predictions about long-term phenotypic change and ecological interactions. Our results illustrate that the presence of highly specialized, non-competing species leads to very stable communities and reveals that phenotypically equivalent species occupying the same niche may emerge and coexist for very long times. Thus, the framework presented here provides a simple approach -complementing existing theories, but specifically devised to account for the specificities of the recent empirical findings for plant communities- to explain the collective emergence of diversification at a community level, and paves the way to further scrutinize the intimate entanglement of ecological and evolutionary processes, especially in species-rich communities.


Subject(s)
Biological Evolution , Ecosystem , Genetic Speciation , Genetic Variation/genetics , Models, Genetic , Plants/genetics , Computer Simulation , Genetics, Population , Phenotype , Species Specificity
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