CDT-CAD: Context-Aware Deformable Transformers for End-to-End Chest Abnormality Detection on X-Ray Images.

Deep learning methods have achieved great success in medical image analysis domain. However, most of them suffer from slow convergency and high computing cost, which prevents their further widely usage in practical scenarios. Moreover, it has been proved that exploring and embedding context knowledge in deep network can significantly improve accuracy. To emphasize these tips, we present CDT-CAD, i.e., context-aware deformable transformers for end-to-end chest abnormality detection on X-Ray images. CDT-CAD firstly constructs an iterative context-aware feature extractor, which not only enlarges receptive fields to encode multi-scale context information via dilated context encoding blocks, but also captures unique and scalable feature variation patterns in wavelet frequency domain via frequency pooling blocks. Afterwards, a deformable transformer detector on the extracted context features is built to accurately classify disease categories and locate regions, where a small set of key points are sampled, thus leading the detector to focus on informative feature subspace and accelerate convergence speed. Through comparative experiments on Vinbig Chest and Chest Det 10 Datasets, CDT-CAD demonstrates its effectiveness in recognizing chest abnormities and outperforms 1.4% and 6.0% than the existing methods in AP50 and AR on VinBig dateset, and 0.9% and 2.1% on Chest Det-10 dataset, respectively.

The Role of Internet of Things to Control the Outbreak of COVID-19 Pandemic.

Currently, COVID-19 pandemic is the major cause of disease burden globally. So, there is a need for an urgent solution to fight against this pandemic. Internet of Things (IoT) has the ability of data transmission without human interaction. This technology enables devices to connect in the hospitals and other planned locations to combat this situation. This article provides a road map by highlighting the IoT applications that can help to control it. This study also proposes a real-time identification and monitoring of COVID-19 patients. The proposed framework consists of four components using the cloud architecture: 1) data collection of disease symptoms (using IoT-based devices); 2) health center or quarantine center (data collected using IoT devices); 3) data warehouse (analysis using machine learning models); and 4) health professionals (provide treatment). To predict the severity level of COVID-19 patients on the basis of IoT-based real-time data, we experimented with five machine learning models. The results reveal that random forest outperformed among all other models. IoT applications will help management, health professionals, and patients to investigate the symptoms of contagious disease and manage COVID-19 +ve patients worldwide.

COVID-19: Automatic Detection of the Novel Coronavirus Disease From CT Images Using an Optimized Convolutional Neural Network.

It is widely known that a quick disclosure of the COVID-19 can help to reduce its spread dramatically. Transcriptase polymerase chain reaction could be a more useful, rapid, and trustworthy technique for the evaluation and classification of the COVID-19 disease. Currently, a computerized method for classifying computed tomography (CT) images of chests can be crucial for speeding up the detection while the COVID-19 epidemic is rapidly spreading. In this article, the authors have proposed an optimized convolutional neural network model (ADECO-CNN) to divide infected and not infected patients. Furthermore, the ADECO-CNN approach is compared with pretrained convolutional neural network (CNN)-based VGG19, GoogleNet, and ResNet models. Extensive analysis proved that the ADECO-CNN-optimized CNN model can classify CT images with 99.99% accuracy, 99.96% sensitivity, 99.92% precision, and 99.97% specificity.

GRIMD: distributed computing for chemists and biologists.

MOTIVATION: Biologists and chemists are facing problems of high computational complexity that require the use of several computers organized in clusters or in specialized grids. Examples of such problems can be found in molecular dynamics (MD), in silico screening, and genome analysis. Grid Computing and Cloud Computing are becoming prevalent mainly because of their competitive performance/cost ratio. Regrettably, the diffusion of Grid Computing is strongly limited because two main limitations: it is confined to scientists with strong Computer Science background and the analyses of the large amount of data produced can be cumbersome it. We have developed a package named GRIMD to provide an easy and flexible implementation of distributed computing for the Bioinformatics community. GRIMD is very easy to install and maintain, and it does not require any specific Computer Science skill. Moreover, permits preliminary analysis on the distributed machines to reduce the amount of data to transfer. GRIMD is very flexible because it shields the typical computational biologist from the need to write specific code for tasks such as molecular dynamics or docking calculations. Furthermore, it permits an efficient use of GPU cards whenever is possible. GRIMD calculations scale almost linearly and, therefore, permits to exploit efficiently each machine in the network. Here, we provide few examples of grid computing in computational biology (MD and docking) and bioinformatics (proteome analysis). AVAILABILITY: GRIMD is available for free for noncommercial research at www.yadamp.unisa.it/grimd. SUPPLEMENTARY INFORMATION: www.yadamp.unisa.it/grimd/howto.aspx.