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1.
Dalton Trans ; 45(22): 9036-40, 2016 May 31.
Article in English | MEDLINE | ID: mdl-27125359

ABSTRACT

The solid state structures of two metal complexes of a hexaamine macrobicyclic ligand, in which the metal ion has an exact trigonal prismatic geometry, have been determined. Theoretical calculations showed this is the most stable geometry for d(0), d(10) and high spin d(5) metal complexes of the ligand with M-N bond distances >∼2.35 Å.

2.
Inorg Chem ; 54(22): 10632-41, 2015 Nov 16.
Article in English | MEDLINE | ID: mdl-26523831

ABSTRACT

Metal-metal bonding in structurally characterized In4Ti3Br12, comprising linear, mixed-valence d(1)d(2)d(1) face-shared [Ti3Br12](4-) units with a Ti-Ti separation of 3.087 Å and strong antiferromagnetic coupling (Θ = -1216 K), has been investigated using density functional theory. The antiferromagnetic configuration, in which the single d electron on each terminal Ti(III) (d(1)) metal center is aligned antiparallel to the two electrons occupying the central Ti(II) (d(2)) metal site, is shown to best agree with the reported structural and magnetic data and is consistent with an S = 0 ground state in which two of the four metal-based electrons are involved in a two-electron, three-center σ bond between the Ti atoms (formal Ti-Ti bond order of ∼0.5). However, the unpaired spin densities on the Ti sites indicate that while the metal-metal σ interaction is strong, the electrons are not fully paired off and consequently dominate the ground state antiferromagnetic coupling. The same overall partially delocalized bonding regime is predicted for the other three halide [Ti3X12](4-) (X = F, Cl, I) systems with the metal-metal bonding becoming weaker as the halide group is descended. The possibility of bond-stretch isomerism was also examined where one isomer has a symmetric structure with identical Ti-Ti bonds while the other is unsymmetric with one short and one long Ti-Ti bond. Although calculations indicate that the latter form is more stable, the barrier to interconversion between equivalent unsymmetric forms, where the short Ti-Ti bond is on one side of the trinuclear unit or the other, is relatively small such that at room temperature only the averaged (symmetric) structure is likely to be observed.

3.
Inorg Chem ; 53(7): 3595-605, 2014 Apr 07.
Article in English | MEDLINE | ID: mdl-24654797

ABSTRACT

The reaction of [Pt(N-N)2](2+) [N-N = 2,2'-bipyridine (bpy) or 4,4'-dimethyl-2,2'-bipyridine (4,4'-Me2bpy)] with phosphine ligands [PPh3 or PPh(PhSO3)2(2-)] in aqueous or methanolic solutions was studied by multinuclear ((1)H, (13)C, (31)P, and (195)Pt) NMR spectroscopy, X-ray crystallography, UV-visible spectroscopy, and high-resolution mass spectrometry. NMR spectra of solutions containing equimolar amounts of [Pt(N-N)2](2+) and phosphine ligand give evidence for rapid formation of long-lived, 5-coordinate [Pt(II)(N-N)2(phosphine)](n+) complexes. In the presence of excess phosphine ligand, these intermediates undergo much slower entry of a second phosphine ligand and loss of a bpy ligand to give [Pt(II)(N-N)(phosphine)2](n+) as the final product. The coordination of a phosphine ligand to the Pt(II) ion in the intermediate [Pt(N-N)2(phosphine)](n+) complexes is supported by the observation of (31)P-(195)Pt coupling in the (31)P NMR spectra. The 5-coordinate nature of [Pt(bpy)2{PPh(PhSO3)2}] is confirmed by X-ray crystallography. X-ray crystal structural analysis shows that the Pt(II) ion in [Pt(bpy)2{PPh(PhSO3)2}]·5.5H2O displays a distorted square pyramidal geometry, with one bpy ligand bound asymmetrically. These results provide strong support for the widely accepted associative ligand substitution mechanism for square planar Pt(II) complexes. X-ray structural characterization of the distorted square planar complex [Pt(bpy)(PPh3)2](ClO4)2 confirms this as the final product of the reaction of [Pt(bpy)2](2+) with PPh3 in CD3OD. The results of density functional calculations on [Pt(bpy)2](2+), [Pt(bpy)2(phosphine)](n+), and [Pt(bpy)(phosphine)2](n+) indicate that the bonding energy follows the trend of [Pt(bpy)(phosphine)2](n+) > [Pt(bpy)2(phosphine)](n+) > [Pt(bpy)2](2+) for stability and that the formation reactions of [Pt(bpy)2(phosphine)](n+) from [Pt(bpy)2](2+) and [Pt(bpy)(phosphine)2](n+) from [Pt(bpy)2(phosphine)](n+) are energetically favorable. These calculations suggest that the driving force for the formation of [Pt(bpy)(phosphine)2](n+) from [Pt(bpy)2](2+) is the formation of a more energetically favorable product.

4.
Inorg Chem ; 52(4): 2029-43, 2013 Feb 18.
Article in English | MEDLINE | ID: mdl-23374019

ABSTRACT

A series of dinuclear cobalt(II) complexes has been prepared and characterized to generate functional and spectroscopic models for cobalt(II) substituted phosphoesterase enzymes such as the potential bioremediator GpdQ. Reaction of ligands based on 2,2'-(((2-hydroxy-5-methyl-1,3-phenylene)bis(methylene))bis((pyridin-2-ylmethyl)azanediyl)))diethanol (L1) and 2,6-bis(((2-methoxyethyl)(pyridin-2-ylmethyl)amino)methyl)-4-methylphenol (L2) with cobalt(II) salts afforded [Co(2)(CO(2)EtH(2)L1)(CH(3)COO)(2)](PF(6)), [Co(2)(CO(2)EtL2)(CH(3)COO)(2)](PF(6)), [Co(2)(CH(3)L2)(CH(3)COO)(2)](PF(6)), [Co(2)(BrL2)(CH(3)COO)(2)](PF(6)), and [Co(2)(NO(2)L2)(CH(3)COO)(2)](PF(6)). Complexes of the L2 ligands contain a coordinated methyl-ether, whereas the L1 ligand contains a coordinated alcohol. The complexes were characterized using mass spectrometry, microanalysis, X-ray crystallography, UV-vis-NIR diffuse reflectance spectroscopy, IR absorption spectroscopy, solid state magnetic susceptibility measurements, and variable-temperature variable-field magnetic circular dichroism (VTVH MCD) spectroscopy. Susceptibility studies show that [Co(2)(CO(2)EtH(2)L1)(CH(3)COO)(2)](PF(6)), [Co(2)(CO(2)EtL2)(CH(3)COO)(2)](PF(6)), and [Co(2)(CH(3)L2)(CH(3)COO)(2)](PF(6)) are weakly antiferromagnetically coupled, whereas [Co(2)(BrL2)(CH(3)COO)(2)](PF(6)) and [Co(2)(NO(2)L2)(CH(3)COO)(2)](PF(6)) are weakly ferromagnetically coupled. The susceptibility results are confirmed by the VTVH MCD studies. Density functional theory calculations revealed that magnetic exchange coupling occurs mainly through the phenolic oxygen bridge. Implications of geometry and ligand design on the magnetic exchange coupling will be discussed. Functional studies of the complexes with the substrate bis(2,4-dinitrophenyl) phosphate showed them to be active towards hydrolysis of phosphoester substrates.


Subject(s)
Cobalt/metabolism , Organometallic Compounds/metabolism , Phosphoric Diester Hydrolases/metabolism , Cobalt/chemistry , Crystallography, X-Ray , Enterobacter aerogenes/enzymology , Enzyme Activation , Magnetic Fields , Models, Molecular , Molecular Structure , Organometallic Compounds/chemistry , Phosphoric Diester Hydrolases/chemistry
6.
Plant Cell Environ ; 36(3): 521-7, 2013 Mar.
Article in English | MEDLINE | ID: mdl-22913508

ABSTRACT

We discuss recent advances in chlorophyll research in the context of chlorophyll evolution and conclude that some derivations of the formyl side chain arrangement of the porphyrin ring from that of the Chl a macrocycle can extend the photosynthetic active radiation (PAR) of these molecules, for example, Chl d and Chl f absorb light in the near-infrared region, up to ∼750 nm. Derivations such as this confer a selective advantage in particular niches and may, therefore, be beneficial for photosynthetic organisms thriving in light environments with particular light signatures, such as red- and near-far-red light-enriched niches. Modelling of formyl side chain substitutions of Chl a revealed yet unidentified but theoretically possible Chls with a distinct shift of light absorption properties when compared to Chl a.


Subject(s)
Chlorophyll/genetics , Evolution, Molecular , Photosynthesis , Plants/metabolism , Adaptation, Biological , Chlorophyll/metabolism , Chlorophyll A
7.
Dalton Trans ; 41(45): 13948-59, 2012 Dec 07.
Article in English | MEDLINE | ID: mdl-23026839

ABSTRACT

The structural and bonding properties of the dinitrogen-bridged diniobium [(Cy(2)N)(3)Nb(µ-NN)Nb(NCy(2))(3)] complex experimentally characterized by Berno and Gambarotta, which exhibits a strongly activated N-N bond of 134 pm, have been explored using density functional methods and compared with those of a series of related [(R(2)N)(3)Nb(µ-NN)Nb(NR(2))(3)] (R = H, Me, (i)Pr, (t)Bu, Cy) model species and other experimentally relevant [Nb(µ-NN)Nb] systems, in order to rationalize the unusually long N-N distance. Geometry optimizations of [(Cy(2)N)(3)Nb(µ-NN)Nb(NCy(2))(3)] and three other known systems indicate that the most favourable N-N distance lies within the range of commonly reported results for end-on bound dinitrogen-diniobium complexes, between 123 and 128 pm. However, structures exhibiting appreciably longer N-N distances, close to 134 pm, are found to be only weakly disfavoured, and may represent the preferred geometry in cases where lengthening of the N-N bond counteracts the effects of highly repulsive steric interactions between terminal fragments. Calculations on model complexes, in which small-sized [R = H, Me] terminal groups are involved, support the finding that N-N bond lengths within the 123-128 pm range are most favoured, whereas calculations on larger [R = (i)Pr, (t)Bu] model species indicate that the presence of excessively repulsive intramolecular interactions can lead to substantial changes in the geometric properties of the [Nb-NN-Nb] core, including significant increase in N-N bond length and activation. The preference for N-N distances ranging between 123 and 128 pm, irrespective of ligand size and identity, can be understood on the basis that the principal bonding mechanisms across the central [Nb-NN-Nb] core are largely unaffected by changes in the chemical composition and properties of terminal fragments. However, the balance between repulsive (steric) and attractive (electrostatic plus orbital) bonding contributions can be altered by the presence of geometrically rigid and oversized peripheral groups and, in these cases, the interplay between repulsive and attractive bonding effects is dominated by the former and can result in abnormally elongated N-N distances. The present calculations thus provide a rationale for the observed structural properties of the [(Cy(2)N)(3)Nb(µ-NN)Nb(NCy(2))(3)] system on the basis of the interplay between electronic and steric factors.


Subject(s)
Niobium/chemistry , Nitrogen/chemistry , Organometallic Compounds/chemistry , Quantum Theory
8.
Inorg Chem ; 51(4): 2065-78, 2012 Feb 20.
Article in English | MEDLINE | ID: mdl-22289382

ABSTRACT

A mixed-valence complex, [Fe(III)Fe(II)L1(µ-OAc)(2)]BF(4)·H(2)O, where the ligand H(2)L1 = 2-{[[3-[((bis(pyridin-2-ylmethyl)amino)methyl)-2-hydroxy-5-methylbenzyl](pyridin-2-ylmethyl)amino]methyl]phenol}, has been studied with a range of techniques, and, where possible, its properties have been compared to those of the corresponding enzyme system purple acid phosphatase. The Fe(III)Fe(II) and Fe(III)(2) oxidized species were studied spectroelectrochemically. The temperature-dependent population of the S = 3/2 spin states of the heterovalent system, observed using magnetic circular dichroism, confirmed that the dinuclear center is weakly antiferromagnetically coupled (H = -2JS(1)·S(2), where J = -5.6 cm(-1)) in a frozen solution. The ligand-to-metal charge-transfer transitions are correlated with density functional theory calculations. The Fe(III)Fe(II) complex is electron paramagnetic resonance (EPR)-silent, except at very low temperatures (<2 K), because of the broadening caused by the exchange coupling and zero-field-splitting parameters being of comparable magnitude and rapid spin-lattice relaxation. However, a phosphate-bound Fe(III)(2) complex showed an EPR spectrum due to population of the S(tot) = 3 state (J= -3.5 cm(-1)). The phosphatase activity of the Fe(III)Fe(II) complex in hydrolysis of bis(2,4-dinitrophenyl)phosphate (k(cat.) = 1.88 × 10(-3) s(-1); K(m) = 4.63 × 10(-3) mol L(-1)) is similar to that of other bimetallic heterovalent complexes with the same ligand. Analysis of the kinetic data supports a mechanism where the initiating nucleophile in the phosphatase reaction is a hydroxide, terminally bound to Fe(III). It is interesting to note that aqueous solutions of [Fe(III)Fe(II)L1(µ-OAc)(2)](+) are also capable of protein cleavage, at mild temperature and pH conditions, thus further expanding the scope of this complex's catalytic promiscuity.


Subject(s)
Acid Phosphatase/chemistry , Ferric Compounds/chemistry , Ferrous Compounds/chemistry , Glycoproteins/chemistry , Acid Phosphatase/metabolism , Animals , Biomimetic Materials/chemistry , Biomimetic Materials/metabolism , Catalytic Domain , Cattle , Crystallography, X-Ray , Electron Spin Resonance Spectroscopy , Ferric Compounds/metabolism , Ferrous Compounds/metabolism , Glycoproteins/metabolism , Hydrolysis , Models, Molecular , Pyridines/chemistry , Pyridines/metabolism , Serum Albumin, Bovine/metabolism
9.
Dalton Trans ; 40(28): 7327-39, 2011 Jul 28.
Article in English | MEDLINE | ID: mdl-21666921

ABSTRACT

Cleavage of cyanide is more difficult to achieve compared to dinitrogen and carbon monoxide, even though these species contain triple bonds of greater strength. In this work, we have used computational methods to investigate thermodynamic and mechanistic aspects of the C-N bond cleavage process in [L(3)M-CN-M'L(3)] systems consisting of a central cyanide unit bound in an end-on fashion to two terminal metal tris-amide complexes. In these systems, [M] is a d(3) transition metal from the 3d, 4d, 5d, or 6d series and groups 4 through 7, and [L] is either [NH(2)], [NMe(2)], [N(i)PrPh], or [N(t)BuAr]. A comparison of various models for the experimentally relevant [L(3)Mo-CN-MoL(3)] system has shown that while the C-N cleavage step appears to be an energetically favourable process, a large barrier exists for the dissociation of [L(3)Mo-CN-MoL(3)]((-)) into [L(3)Mo-C]((-)) and [N-MoL(3)], which possibly explains why C-N bond scission is not observed experimentally. The general structural, bonding, and thermochemical trends across the transition metal series investigated, indicate that the systems exhibiting the greatest degree of C-N activation, and most favourable energetics for C-N cleavage, also possess the most favourable electronic properties, namely, a close match between the relevant π-like orbitals on the metal-based and cyanide fragments. The negative charge on the cyanide fragment leads to significant destabilization of the π* level which needs to be populated through back-donation from the metal centres in order for C-N bond scission to be achieved. Therefore, metal-based systems with high-lying d(π) orbitals are best suited to C-N cleavage. In terms of chemical periodicity, these systems can be identified as the heavier members within a group and the earlier members within a period. As a consequence, Mo complexes are not well suited to cleaving the C-N bond, whereas the Ta analogues are the most favourable systems and should, in principle, be capable of cleaving cyanide under relatively mild conditions. An important conclusion from this work is that a successful strategy for achieving cleavage of multiply-bonded, and relatively unreactive, molecular fragments, may simply lie in tuning the electronic structures and orbital interactions by judicious choice of metal sites and ligand groups.


Subject(s)
Carbon/chemistry , Coordination Complexes/chemistry , Cyanides/chemistry , Nitrogen/chemistry , Computer Simulation , Ligands , Metals/chemistry , Molecular Structure , Molybdenum/chemistry , Thermodynamics , Transition Elements/chemistry
10.
Dalton Trans ; 39(19): 4529-40, 2010 May 21.
Article in English | MEDLINE | ID: mdl-20372747

ABSTRACT

The activation and cleavage of the N-N bond in side-on bound [L2M-NN-ML2] (L = NH2, NMe2, N(i)Pr2, C5H5, C5Me4H) dinitrogen complexes of transition metals in groups 4 through 9 have been investigated using density functional theory. Emphasis has been placed on Ti, Zr, and Hf (group 4) complexes due to their experimental relevance. Calculations on these species have shown that for cases when the structural configuration corresponds to the terminal [ML2] fragments adopting a perpendicular orientation with respect to the central [N-N] unit, a considerably higher degree of N-N activation is predicted relative to that observed in the experimentally characterized cyclopentadienyl analogues and in related systems involving end-on dinitrogen coordination. An examination of the orbital interactions between the metal-based fragments and the dinitrogen unit shows that both σ and π bonding are important in the side-on binding mode, in contrast to the end-on mode where metal-nitrogen π interactions are dominant. This analysis also reveals that the model amide systems possess the orbital properties identified as necessary for successful N-N hydrogenation. A significant result obtained for the amide complexes containing metals from groups 5 (V, Nb, Ta), 6 (Cr, Mo, W), and 7 (Mn, Tc, Re), is the presence of metal-metal bonding in configurations that are considerably distorted from planarity. As a consequence, these complexes exhibit strongly enhanced stability relative to species where metal-metal bonding is absent. In contrast, the d² metal-based configurations in the group 4 complexes of Ti, Zr, and Hf are unable to provide the six electrons required for complete reductive cleavage of the dinitrogen unit which is necessary to allow the metal centres to approach one another sufficiently for metal-metal bond formation.


Subject(s)
Metals/chemistry , Nitrogen/chemistry , Transition Elements/chemistry , Amides/chemistry , Cyclopentanes/chemistry , Electrons , Ligands , Models, Molecular , Molecular Conformation , Molecular Structure , Protein Binding , Static Electricity
11.
Inorg Chem ; 48(21): 10036-48, 2009 Nov 02.
Article in English | MEDLINE | ID: mdl-19852517

ABSTRACT

The binuclear heterovalent manganese model complex [Mn(II)Mn(III)(L1)(OAc)(2)] ClO(4) x H(2)O (H(2)L1 = 2-(((3-((bis(pyridin-2-ylmethyl)amino)methyl)-2-hydroxy-5-methylbenzyl)(pyridin-2-ylmethyl)amino)-methyl)phenol) has been prepared and studied structurally, spectroscopically, and computationally. The magnetic and electronic properties of the complex have been related to its structure. The complex is weakly antiferromagnetically coupled (J approximately -5 cm(-1), H = -2J S(1) x S(2)) and the electron paramagnetic resonance (EPR) and magnetic circular dichroism (MCD) spectra identify the Jahn-Teller distortion of the Mn(III) center as predominantly a tetragonal compression, with a significant rhombic component. Electronic structure calculations using density functional theory have confirmed the conclusions derived from the experimental investigations. In contrast to isostructural M(II)Fe(III) complexes (M = Fe, Mn, Zn, Ni), the Mn(II)Mn(III) system is bifunctional possessing both catalase and hydrolase activities, and only one catalytically relevant pK(a) (= 8.2) is detected. Mechanistic implications are discussed.


Subject(s)
Acid Phosphatase/chemistry , Glycoproteins/chemistry , Manganese/chemistry , Models, Biological , Catalysis , Crystallography, X-Ray , Magnetics , Molecular Structure
12.
Chemistry ; 15(42): 11373-83, 2009 Oct 26.
Article in English | MEDLINE | ID: mdl-19746461

ABSTRACT

The reaction profile of N(2) with Fryzuk's [Nb(P(2)N(2))] (P(2)N(2)=PhP(CH(2)SiMe(2)NSiMe(2)CH(2))(2)PPh) complex is explored by density functional calculations on the model [Nb(PH(3))(2)(NH(2))(2)] system. The effects of ligand constraints, coordination number, metal and ligand donor atom on the reaction energetics are examined and compared to the analogous reactions of N(2) with the three-coordinate Laplaza-Cummins [Mo{N(R)Ar}(3)] and four-coordinate Schrock [Mo(N(3)N)] (N(3)N=[(RNCH(2)CH(2))(3)N](3-)) systems. When the model system is constrained to reflect the geometry of the P(2)N(2) macrocycle, the N--N bond cleavage step, via a N(2)-bridged dimer intermediate, is calculated to be endothermic by 345 kJ mol(-1). In comparison, formation of the single-N-bridged species is calculated to be exothermic by 119 kJ mol(-1), and consequently is the thermodynamically favoured product, in agreement with experiment. The orientation of the amide and phosphine ligands has a significant effect on the overall reaction enthalpy and also the N--N bond cleavage step. When the ligand constraints are relaxed, the overall reaction enthalpy increases by 240 kJ mol(-1), but the N(2) cleavage step remains endothermic by 35 kJ mol(-1). Changing the phosphine ligands to amine donors has a dramatic effect, increasing the overall reaction exothermicity by 190 kJ mol(-1) and that of the N--N bond cleavage step by 85 kJ mol(-1), making it a favourable process. Replacing Nb(II) with Mo(III) has the opposite effect, resulting in a reduction in the overall reaction exothermicity by over 160 kJ mol(-1). The reaction profile for the model [Nb(P(2)N(2))] system is compared to those calculated for the model Laplaza and Cummins [Mo{N(R)Ar}(3)] and Schrock [Mo(N(3)N)] systems. For both [Mo(N(3)N)] and [Nb(P(2)N(2))], the intermediate dimer is calculated to lie lower in energy than the products, although the final N-N cleavage step is much less endothermic for [Mo(N(3)N)]. In contrast, every step of the reaction is favourable and the overall exothermicity is greatest for [Mo{N(R)Ar}(3)], and therefore this system is predicted to be most suitable for dinitrogen cleavage.

13.
Dalton Trans ; (6): 956-64, 2009 Feb 14.
Article in English | MEDLINE | ID: mdl-19173078

ABSTRACT

The activation and scission of the N-O bond in nitric oxide using dinuclear mixed-metal species, comprising transition elements with d(3) and d(2) configurations and trisamide ligand systems, have been investigated by means of density functional calculations. The [Cr(iii)-V(iii)] system is analyzed in detail and, for comparative purposes, the [Mo(iii)-Nb(iii)], [W(iii)-Ta(iii)], and (mixed-row) [Mo(iii)-V(iii)] systems are also considered. The overall reaction and individual intermediate steps are favourable for all systems, including the case where first row (Cr and V) metals are exclusively involved, a result that has not been observed for the related dinitrogen and carbon monoxide systems. In contrast to the cleavage of dinitrogen by three-coordinate Mo amide complexes where the dinuclear intermediate possesses a linear [Mo-NN-Mo] core, the [M-NO-M'] core must undergo significant bending in order to stabilize the dinuclear species sufficiently for the reaction to proceed beyond the formation of the nitrosyl encounter complex. A comparative bonding analysis of nitric oxide, dinitrogen and carbon monoxide activation is also presented. The overall results indicate that the pi interactions are the dominant factor in the bonding across the [M-L(1)L(2)-M'] (L(1)L(2) = N-O, N-N, C-O) moiety and, consequently, the activation of the L(1)-L(2) bond. These trends arise from the fact that the energy gaps between the pi orbitals on the metal and small molecule fragments are much more favourable than for the corresponding sigma orbitals. The pi energy gaps decrease in the order [NO < N(2) < CO] and consequently, for each individual pi orbital interaction, the back donation between the metal and small molecule increases in the order [CO < N(2) < NO]. These results are in accord with previous findings suggesting that optimization of the pi interactions plays a central role in increasing the ability of these transition metal systems to activate and cleave small molecule bonds.


Subject(s)
Carbon Monoxide/chemistry , Metals/chemistry , Nitric Oxide/chemistry , Nitrogen/chemistry , Thermodynamics
14.
Dalton Trans ; (37): 4984-92, 2008 Oct 07.
Article in English | MEDLINE | ID: mdl-18802610

ABSTRACT

The syntheses and X-ray structures of [Co(Me-tpa)O2COZnCl3], [Co(pmea)O2COZnCl3].H2O [Co(trpyn)O2COZn(OH2)4OCO2Co(trpyn)](ZnCl4)2.H2O, [Co(trpyn)(O2COH)]ZnCl(4).3H2O and [Co(trpyn)(O2CO)]ClO4 are reported (Me-tpa=[(6-methyl-2-pyridyl)methyl]bis(2-pyridylmethyl)amine, pmea=bis(2-pyridylmethyl)-2-(2-pyridylethyl)amine, trpyn=tris(2-(1-pyrazolyl)ethyl)amine). The chelated bicarbonate complex [Co(trpyn)(O2COH)]ZnCl(4).3H2O is isolated as a crystalline solid from an acidic solution of the parent carbonate [Co(trpyn)(O2CO)]ClO4, and X-ray structural analysis shows that lengthening of the C=Oexo bond and shortening of the C-Oendo bond accompanies protonation. The bimetallic complex [Co(Me-tpa)O2COZnCl3] results from the unexpected coordination of ZnCl3- to the exo O atom of a chelated carbonate ligand. This complex is obtained from both acidic and neutral solutions in which [Zn2+]=1.0 M, while the structurally similar complex [Co(pmea)O2COZnCl3].H2O is isolated from an analogous neutral solution. The trimetallic complex [Co(trpyn)O2COZn(OH2)4OCO2Co(trpyn)](ZnCl4)2.H2O crystallises on prolonged standing of [Co(trpyn)(O2CO)]ClO4 in a neutral solution having [Zn2+]=1.0 M. The Zn-O bond lengths in all three complexes are indicative of bonds of significant strength. DFT calculations show that the nature of the bonding interaction between the Co(III) ion and the endo O atoms of the carbonate ligand remain essentially unaffected by coordination of Zn2+ to the exo O atom. They also show that such coordination of Zn2+ decreases the C-Oexo bond order.


Subject(s)
Carbonates/chemistry , Chelating Agents/chemistry , Cobalt/chemistry , Organometallic Compounds/chemistry , Organometallic Compounds/chemical synthesis , Chelating Agents/chemical synthesis , Crystallography, X-Ray , Ligands , Models, Chemical , Models, Molecular , Molecular Structure , Protons , Solutions/chemistry , Stereoisomerism , Water/chemistry
15.
Dalton Trans ; (18): 2433-41, 2008 May 14.
Article in English | MEDLINE | ID: mdl-18461199

ABSTRACT

Density functional calculations have been carried out on the experimentally characterized Co(III) [Co(N4)(O2CO)]+ carbonate complexes containing a tripodal tetraamine ligand (N4 = tpa, Metpa, Me2tpa, Me3tpa, pmea, pmap, tepa) and also the model [Co(NH3)4(O2CO)]+ system. Calculations on the model species, performed using both gas-phase and solvent-corrected procedures, have revealed that the inclusion of a condensed-phase environment is necessary to obtain generally satisfactory results for the structural and bonding properties in these systems. Using the solvent-corrected approach, the observed trends in structural parameters for the metal-ligand bonds, 59Co chemical shifts, and changes in visible absorption wavelengths have been satisfactorily reproduced for the [Co(N4)(O2CO)]+ complexes. A time-dependent density functional analysis of the electronic excitations indicates that the overall composition and character of the relevant (d-d) transitions remain similar throughout the series, indicating that the changes in the Co-N interactions, associated with the structural variations occurring as the N-donor ligand identity and size change, appear most likely responsible for the particular spectroscopic features displayed by these species. These observations are further supported by molecular orbital and energy decomposition analyses. The results from the present calculations confirm recent findings that the inclusion of a treatment for solvent effects plays a critical role in the computational modelling of coordination complexes involving mixed (anionic and neutral) ligands.

16.
Inorg Chem ; 47(8): 3072-83, 2008 Apr 21.
Article in English | MEDLINE | ID: mdl-18366161

ABSTRACT

The molecular and electronic structures of trinuclear face-shared [M3X12]3-species of Mo (X = F, Cl, Br, I) and W (X = Cl), containing linear chains of metal atoms, have been investigated using density functional theory. The possibility of variations in structure and bonding has been explored by considering both symmetric (D3d) and unsymmetric (C3v) forms, the latter having one long and one short metal-metal distance. Analysis of the bonding in the structurally characterized [Mo3I12]3- trimer reveals that the metal-metal interaction qualitatively corresponds to a two-electron three-center sigma bond between the Mo atoms and, consequently, a formal Mo-Mo bond order of 0.5. However, the calculated spin densities suggest that the electrons in the metal-metal sigma bond are not fully decoupled and therefore participate in the antiferromagnetic interactions of the metal cluster. Although the same observation applies to [Mo3X12]3- (X = Br, Cl, F) and [W3Cl12]3-, both the spin densities and shorter distances between the metal atoms indicate that the metal-metal interaction is stronger in these systems. The broken-symmetry approach combined with spin projection has been used to determine the energy of the low-lying spin multiplets arising from the magnetic coupling between the metal centers. Either the symmetric and unsymmetric S = 3/2 state is predicted to be the ground state for all five systems. For [Mo3X12]3- (X = Cl, Br, I), the symmetric form is more stable but the unsymmetric structure, where two metal centers are involved in a metal-metal triple bond while the third center is decoupled, lies close in energy and is thermally accessible. Consequently, at room temperature, interconversion between the two energetically equivalent configurations of the unsymmetric form should result in an averaged structure that is symmetric. This prediction is consistent with the reported structure of [Mo3I12]3-, which, although symmetric, indicates significant movement of the central Mo atom toward the terminal Mo atoms on either side. In contrast, unsymmetric structures with a triple bond between two metal centers are predicted for [Mo3F2]3- and [W3C12]3-, as the symmetric structure lies too high in energy to be thermally accessible.

17.
Inorg Chem ; 46(9): 3557-65, 2007 Apr 30.
Article in English | MEDLINE | ID: mdl-17381084

ABSTRACT

The electronic structures of a series of [M2X8]2- (X=Cl, Br) complexes involving 5f (U, Np, Pu), 5d (W, Re, Os), and 4d (Mo, Tc, Ru) elements have been calculated using density functional theory, and an energy decomposition approach has been used to carry out a detailed analysis of the metal-metal interactions. The energy decomposition analysis involves contributions from orbital interactions (mixing of occupied and unoccupied orbitals), electrostatic effects (Coulombic attraction and repulsion), and Pauli repulsion (associated with four-electron two-orbital interactions). As previously observed for Mo, W, and U M2X6 species, the general results suggest that the overall metal-metal interaction is considerably weaker or unfavorable in the actinide systems relative to the d-block analogues, as a consequence of a significantly more destabilizing contribution from the combined Pauli and electrostatic (prerelaxation) effects. Although the orbital-mixing (postrelaxation) contribution to the total bonding energy is predicted to be larger in the actinide complexes, this is not sufficiently strong to compensate for the comparatively greater destabilization originating from the Pauli-plus-electrostatic effects. A generally weak electrostatic contribution accounts for the large prerelaxation destabilization in the f-block systems, and ultimately for the weak or unfavorable nature of metal-metal bonding between the actinide elements. There is a greater variation in the energy decomposition results across the [M2Cl8]2- series for the actinide than for the d-block elements, both in the general behavior and in some particular properties.

18.
Dalton Trans ; (46): 5476-83, 2006 Dec 14.
Article in English | MEDLINE | ID: mdl-17117217

ABSTRACT

Density functional and multiconfigurational (ab initio) calculations have been performed on [M(2)X(8)](2-) (X = Cl, Br, I) complexes of 4d (Mo, Tc, Ru), 5d (W, Re, Os), and 5f (U, Np, Pu) metals in order to investigate general trends, similarities and differences in the electronic structure and metal-metal bonding between f-block and d-block elements. Multiple metal-metal bonds consisting of a combination of sigma and pi interactions have been found in all species investigated, with delta-like interactions also occurring in the complexes of Tc, Re, Np, Ru, Os, and Pu. The molecular orbital analysis indicates that these metal-metal interactions possess predominantly d(z2) (sigma), d(xz) and d(yz) (pi), or d(xy) and d(x2-y2) (delta) character in the d-block species, and f(z3) (sigma), f(z2x) and f(z2y) (pi), or f(xyz) and f(z) (delta) character in the actinide systems. In the latter, all three (sigma, pi, delta) types of interaction exhibit bonding character, irrespective of whether the molecular symmetry is D(4h) or D(4d). By contrast, although the nature and properties of the sigma and pi bonds are largely similar for the D(4h) and D(4d) forms of the d-block complexes, the two most relevant metal-metal delta-like orbitals occur as a bonding and antibonding combination in D(4h) symmetry but as a nonbonding level in D(4d) symmetry. Multiconfigurational calculations have been performed on a subset of the actinide complexes, and show that a single electronic configuration plays a dominant role and corresponds to the lowest-energy configuration obtained using density functional theory.

19.
Inorg Chem ; 45(17): 6828-39, 2006 Aug 21.
Article in English | MEDLINE | ID: mdl-16903739

ABSTRACT

Density functional calculations have been performed on M2X6 complexes (where M = U, W, and Mo and X = Cl, F, OH, NH2, and CH3) to investigate general aspects of their electronic structures and explore the similarities and differences in metal-metal bonding between f-block and d-block elements. A detailed analysis of the metal-metal interactions has been conducted using molecular orbital theory and energy decomposition methods. Multiple (sigma and pi) bonding is predicted for all species investigated, with predominant f-f and d-d metal orbital character, respectively, for U and W or Mo complexes. The energy decomposition analysis involves contributions from orbital interactions (mixing of occupied and unoccupied orbitals), electrostatic effects (Coulombic attraction and repulsion), and Pauli repulsion (associated with four-electron two-orbital interactions). The general results suggest that the overall metal-metal interaction is stronger in the Mo and W species, relative to the U analogues, as a consequence of a significantly less destabilizing contribution from the combined Pauli and electrostatic ("pre-relaxation") effects. Although the orbital-mixing ("post-relaxation") contribution to the total bonding energy is predicted to have a larger magnitude in the U complexes, this is not sufficiently strong to compensate for the comparatively greater destabilization that originates from the Pauli-plus-electrostatic effects. Of the pre-relaxation terms, the Pauli repulsion is comparable in analogous U and d-block compounds, contrary to the electrostatic term, which is (much) less favorable in the U systems than in the W and Mo systems. This generally weak electrostatic stabilization accounts for the large pre-relaxation destabilization in the U complexes and, ultimately, for the relative weakness of the U-U bonds. The origin of the small electrostatic term in the U compounds is traced primarily to MX(3) fragment overlap effects.

20.
Dalton Trans ; (16): 2017-25, 2006 Apr 28.
Article in English | MEDLINE | ID: mdl-16609773

ABSTRACT

The periodic trends in metal-metal interactions in even-electron and mixed-valence [M2Cl9]z- face-shared systems, involving transition metals in Groups 4 to 8 and electronic configurations ranging from d1d1 through to d5d5 and from d1d2 through to d4d5, have been investigated by calculating metal-metal bonding and spin polarization (exchange) effects using density functional theory. These two terms are in opposition to one another and their relative difference determines the extent to which the metal-based electrons are delocalized and thus the degree of metal-metal bonding. Remarkably strong linear correlations between the two terms, and between each term and the square of the spin density on the metal centres, have been obtained for all group and period series considered, and are discussed in terms of their dependence on the metal orbital properties and electron density.

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