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1.
J Phys Condens Matter ; 33(28)2021 Jun 04.
Article in English | MEDLINE | ID: mdl-33957610

ABSTRACT

A scanning multi-crystal x-ray emission spectrometer to perform photon-in/photon-out spectroscopy at the I20-Scanning beamline at Diamond Light Source is described. The instrument, equipped with three analyzer crystals, is based on a 1 m Rowland circle spectrometer operating in the vertical plane. The energy resolution of the spectrometer is of the order of 1 eV, having sufficient resolving power to overcome the core-hole lifetime broadening of most of the transition metalsK-edges. Examples showing the capability of the beamline for performing high energy resolution fluorescence detection x-ray absorption spectroscopy (HERFD-XAS), non-resonant x-ray emission spectroscopy (XES) and resonant x-ray emission spectroscopy are presented. The comparison of the Zn and MnK-edge HERFD-XANES of ZnO and MnO withab initiocalculations shows that the technique provides enhanced validation of the models by making subtle spectral features more visible.

2.
IUCrJ ; 1(Pt 6): 571-89, 2014 Nov 01.
Article in English | MEDLINE | ID: mdl-25485137

ABSTRACT

Worldwide research activity at the nanoscale is triggering the appearance of new, and frequently surprising, materials properties in which the increasing importance of surface and interface effects plays a fundamental role. This opens further possibilities in the development of new multifunctional materials with tuned physical properties that do not arise together at the bulk scale. Unfortunately, the standard methods currently available for solving the atomic structure of bulk crystals fail for nanomaterials due to nanoscale effects (very small crystallite sizes, large surface-to-volume ratio, near-surface relaxation, local lattice distortions etc.). As a consequence, a critical reexamination of the available local-structure characterization methods is needed. This work discusses the real possibilities and limits of X-ray absorption spectroscopy (XAS) analysis at the nanoscale. To this end, the present state of the art for the interpretation of extended X-ray absorption fine structure (EXAFS) is described, including an advanced approach based on the use of classical molecular dynamics and its application to nickel oxide nanoparticles. The limits and possibilities of X-ray absorption near-edge spectroscopy (XANES) to determine several effects associated with the nanocrystalline nature of materials are discussed in connection with the development of ZnO-based dilute magnetic semiconductors (DMSs) and iron oxide nanoparticles.

3.
J Synchrotron Radiat ; 20(Pt 4): 635-40, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23765307

ABSTRACT

This work reports an X-ray absorption near-edge structure (XANES) spectroscopy study at the Ni K-edge in the early stages of growth of NiO on non-ordered SiO2, Al2O3 and MgO thin films substrates. Two different coverages of NiO on the substrates have been studied. The analysis of the XANES region shows that for high coverages (80 Eq-ML) the spectra are similar to that of bulk NiO, being identical for all substrates. In contrast, for low coverages (1 Eq-ML) the spectra differ from that of large coverages indicating that the local order around Ni is limited to the first two coordination shells. In addition, the results also suggest the formation of cross-linking bonds Ni-O-M (M = Si, Al, Mg) at the interface.

4.
ACS Appl Mater Interfaces ; 5(6): 1967-76, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23432474

ABSTRACT

This work describes the reactive magnetron sputtering processing at room temperature of several mixed oxide MxSiyOz thin films (M: Fe, Ni, Co, Mo, W, Cu) intended for optical, coloring, and aesthetic applications. Specific colors can be selected by adjusting the plasma gas composition and the Si-M ratio in the magnetron target. The microstructure and chemistry of the films are characterized by a large variety of techniques including X-ray photoemission spectroscopy, X-ray absorption spectroscopy (XAS), and infrared spectroscopy, while their optical properties are characterized by UV-vis transmission and reflection analysis. Particularly, XAS analysis of the M cations in the amorphous thin films has provided valuable information about their chemical state and local structure. It is concluded that the M cations are randomly distributed within the SiO2 matrix and that both the M concentration and its chemical state are the key parameters to control the final color of the films.

5.
J Phys Chem A ; 115(11): 2345-9, 2011 Mar 24.
Article in English | MEDLINE | ID: mdl-21361389

ABSTRACT

The coordination structures of U(IV), Np(IV), and Th(IV) in aqueous solution have been determined by studying the X-ray absorption near edge structure (XANES) of the actinide (An) L(3)-edge absorption spectra. The high sensitivity of XANES to the bonding geometry provides an unambiguous determination of the coordination polyhedron. On the basis of the comparison of ab initio computations with the experimental data we conclude that the hydration sphere of the three An(IV) aqua-ions studied is best modeled by 9 water molecules forming a tricapped trigonal prism.

6.
Chem Biol ; 18(1): 25-31, 2011 Jan 28.
Article in English | MEDLINE | ID: mdl-21276936

ABSTRACT

Identifying the factors that govern the thermal resistance of cupredoxins is essential for understanding their folding and stability, and for improving our ability to design highly stable enzymes with potential biotechnological applications. Here, we show that the thermal unfolding of plastocyanins from two cyanobacteria--the mesophilic Synechocystis and the thermophilic Phormidium--is closely related to the short-range structure around the copper center. Cu K-edge X-ray absorption spectroscopy shows that the bond length between Cu and the S atom from the cysteine ligand is a key structural factor that correlates with the thermal stability of the cupredoxins in both oxidized and reduced states. These findings were confirmed by an additional study of a site-directed mutant of Phormidium plastocyanin showing a reverse effect of the redox state on the thermal stability of the protein.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Copper/metabolism , Cyanobacteria , Plastocyanin/chemistry , Plastocyanin/metabolism , Temperature , Bacterial Proteins/genetics , Binding Sites , Copper/chemistry , Cysteine/chemistry , Cysteine/metabolism , Electron Transport , Ligands , Models, Molecular , Mutation , Plastocyanin/genetics , Protein Conformation , Protein Stability , Protein Unfolding , Sulfur/chemistry , X-Ray Absorption Spectroscopy
7.
Phys Chem Chem Phys ; 13(3): 927-32, 2011 Jan 21.
Article in English | MEDLINE | ID: mdl-21116550

ABSTRACT

We report unusual cooling field dependence of the exchange bias in oxide-coated cobalt nanoparticles embedded within the nanopores of a carbon matrix. The size-distribution of the nanoparticles and the exchange bias coupling observed up to about 200 K between the Co-oxide shell (∼3-4 nm) and the ferromagnetic Co-cores (∼4-6 nm) are the key to understand the magnetic properties of this system. The estimated values of the effective anisotropy constant and saturation magnetization obtained from the fit of the zero-field cooling and field cooling magnetization vs. temperature curves agree quite well with those of the bulk fcc-Co.


Subject(s)
Carbon/chemistry , Cobalt/chemistry , Metal Nanoparticles/chemistry , Oxides/chemistry , Magnetics , Metal Nanoparticles/ultrastructure , Porosity , Temperature
8.
J Synchrotron Radiat ; 17(3): 308-13, 2010 May.
Article in English | MEDLINE | ID: mdl-20400827

ABSTRACT

Circularly polarized X-rays produced by a diamond X-ray phase retarder of thickness 0.5 mm in the Laue transmission configuration have been used for recording X-ray magnetic circular dichroism (XMCD) on the bending-magnet beamline BM25A (SpLine) at the ESRF. Field reversal and helicity reversal techniques have been used to carry out the measurements. The performance of the experimental set-up has been demonstrated by recording XMCD in the energy range from 7 to 11 keV.

9.
J Synchrotron Radiat ; 16(Pt 4): 533-44, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19535869

ABSTRACT

A theoretical study of the X-ray absorption near-edge structure (XANES) spectra at the Mn K-edge in the La(1-x)Ca(x)MnO(3) series is reported. The relationship between the edge shift, the Ca-La substitution and the distortion of the MnO(6) octahedra in these systems has been studied. It is shown that, by correctly considering these effects simultaneously, the experimental XANES data are consistent with the presence of two different Mn local environments in the intermediate La(1-x)Ca(x)MnO(3) compounds. By taking into account the energy shift associated with the modification of the MnO(6) distortion as Ca substitutes for La, it is possible to reproduce the XANES spectra of the intermediate-doped compounds starting from the experimental spectra of the end-members LaMnO(3) and CaMnO(3). These results point out the need to re-examine the conclusions derived in the past from the simple analysis of the Mn K-edge XANES edge-shift in these materials. In particular, it is shown that the modification of the Mn K-edge absorption through the La(1-x)Ca(x)MnO(3) series is well reproduced by considering the simultaneous presence of both distorted and undistorted octahedra and, consequently, that the existence of charge-ordering phenomena cannot be ruled out from the XANES data.

10.
J Synchrotron Radiat ; 16(Pt 3): 405-12, 2009 May.
Article in English | MEDLINE | ID: mdl-19395807

ABSTRACT

An X-ray magnetic circular dichroism (XMCD) study performed at the rare-earth L(2,3)-edges in the R(x)R(1-x)'Al(2) compounds is presented. It is shown that both R and R' atoms contribute to the XMCD recorded at the L-edges of the selected rare-earth, either R or R'. The amplitude of the XMCD signal is not directly correlated to the magnetization or to the value of the individual (R, R') magnetic moments, but it is related to the molecular field acting on the rare-earth tuned in the photoabsorption process. This result closes a longstanding study of the origin of the XMCD at the L-edge of the rare-earths in multi-component systems, allowing a full understanding of the exact nature of these signals.


Subject(s)
Circular Dichroism , Magnetics , Metals, Rare Earth/chemistry , Models, Chemical , Computer Simulation , X-Rays
11.
J Phys Chem B ; 113(11): 3527-35, 2009 Mar 19.
Article in English | MEDLINE | ID: mdl-19278267

ABSTRACT

The solvation structure of yttrium (III) in dimethyl sulfoxide has been determined by studying both the extended X-ray absorption fine structure (EXAFS) and the X-ray absorption near edge structure (XANES) regions of the Y K-edge absorption spectra. Although the EXAFS technique provides accurate information about the next neighbors coordination distances, no unambiguous determination of the coordination polyhedron is obtained. This failure is counteracted by the study of the near-edge part of the absorption spectrum (XANES) because of its high sensitivity to the bonding geometry. We have performed an extensive and systematic ab initio computation of the Y K-edge XANES spectrum of yttrium (III) in dimethyl sulfoxide within the multiple-scattering framework. The comparison between the experimental data and the theoretical calculations has demonstrated that the solvation sphere of the yttrium cation is best modeled by eight dimethyl sulfoxide molecules each oriented to give an Y-O-S angle close to 130 degrees .

12.
J Synchrotron Radiat ; 16(Pt 1): 38-42, 2009 Jan.
Article in English | MEDLINE | ID: mdl-19096172

ABSTRACT

An X-ray magnetic circular dichroism (XMCD) study performed at the Ho L2,3-edges in Ho6Fe23 as a function of temperature is presented. It is demonstrated that the anomalous temperature dependence of the Ho L2-edge XMCD signal is due to the magnetic contribution of Fe atoms. By contrast, the Ho L3-edge XMCD directly reflects the temperature dependence of the Ho magnetic moment. By combining the XMCD at both Ho L2- and L3-edges, the possibility of determining the temperature dependence of the Fe magnetic moment is demonstrated. Then, both microHo(T) and microFe(T) have been determined by tuning only the absorption L-edges of Ho. This result opens new possibilities of applying XMCD at these absorption edges to obtain quantitative element-specific magnetic information that is not directly obtained by other experimental tools.

13.
J Synchrotron Radiat ; 15(Pt 5): 440-8, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18728314

ABSTRACT

X-ray magnetic circular dichroism (XMCD) has become in recent years an outstanding tool for studying magnetism. Its element specificity, inherent to core-level spectroscopy, combined with the application of magneto-optical sum rules allows quantitative magnetic measurements at the atomic level. These capabilities are now incorporated as a standard tool for studying the localized magnetism in many systems. However, the application of XMCD to the study of the conduction-band magnetism is not so straightforward. Here, it is shown that the atomic selectivity is not lost when XMCD probes the delocalized states. On the contrary, it provides a direct way of disentangling the magnetic contributions to the conduction band coming from the different elements in the material. This is demonstrated by monitoring the temperature dependence of the XMCD spectra recorded at the rare-earth L(2)-edge in the case of RT(2) (R = rare-earth, T = 3d transition metal) materials. These results open the possibility of performing element-specific magnetometry by using a single X-ray absorption edge.


Subject(s)
Magnetics , X-Rays
14.
J Synchrotron Radiat ; 13(Pt 6): 471-6, 2006 Nov.
Article in English | MEDLINE | ID: mdl-17057325

ABSTRACT

A theoretical analysis of the X-ray absorption near-edge structure spectra at the Cu K-edge in several divalent copper [Cu(II)] compounds showing a distorted nearest-neighborhood around copper is presented. The experimental spectra of CuO and KCuF(3) have been compared with computations performed in the framework of the multiple-scattering theory. The results show that ab initio single-channel multiple-scattering calculations are not able to reproduce the experimental spectra. On the contrary, the experimental spectra can be accounted for by using two excitation channels and the sudden limit of the multichannel multiple-scattering theory. The comparison between experimental data and computations indicates that both 3d(9) and 3d(10)L electronic configurations are needed to account for the absorption process in these systems, suggesting that this is the general case for the K-edge XANES of divalent copper compounds.


Subject(s)
Copper/chemistry , Crystallography, X-Ray/methods , Models, Chemical , Models, Molecular , Computer Simulation , Electronics
15.
J Chem Phys ; 124(6): 64509, 2006 Feb 14.
Article in English | MEDLINE | ID: mdl-16483222

ABSTRACT

The long elusive structure of Cu(II) hydrate in aqueous solutions, classically described as a Jahn-Teller distorted octahedron and recently proposed to be a fivefold coordination structure [Pasquarello et al., Science 291, 856 (2001)], has been probed with x-ray-absorption spectroscopy by performing a combined theoretical and experimental analysis. Two absorption channels were needed to obtain a proper reproduction of the x-ray-absorption near-edge structure (XANES) region spectrum, as already observed in other Cu(II) complexes [Chaboy et al., Phys. Rev. B 71, 134208 (2005)]. The extended x-ray-absorption fine-structure (EXAFS) spectrum was analyzed as well within this approach. Quite good reproductions of both XANES and EXAFS spectra were attained for several distorted and undistorted structures previously proposed. Nevertheless, there is not a clearly preferred structure among those including four-, five-, and sixfold coordinated Cu(II) ions. Taking into account our results, as well as many more from several other authors using different techniques, the picture of a distorted octahedron for the Cu(II) hexahydrate in aqueous solution, paradigm of the Jahn-Teller effect, is no longer supported. In solution a dynamical view where the different structures exchange among themselves is the picture that better suits the results presented here.


Subject(s)
Biopolymers/chemistry , Copper/chemistry , Water/chemistry , Cations, Divalent , Ligands , Solutions/chemistry , Spectrometry, X-Ray Emission
16.
Inorg Chem ; 43(21): 6674-83, 2004 Oct 18.
Article in English | MEDLINE | ID: mdl-15476367

ABSTRACT

Knowledge of the complexes formed by N-coordinating ligands and Cu(II) ions is of relevance in understanding the interactions of this ion with biomolecules. Within this framework, we investigated Cu(II) complexation with mono- and polydentate ligands, such as ammonia, ethylenediamine (en), and phthalocyanine (Pc). The obtained Cu-N coordination distances were 2.02 A for [Cu(NH(3))(4)](2+), 2.01 A for [Cu(en)(2)](2+), and 1.95 A for CuPc. The shorter bond distance found for CuPc is attributed to the macrocyclic effect. In addition to the structure of the first shell, information on higher coordination shells of the chelate ligands could be extracted by EXAFS, thus allowing discrimination among the different coordination modes. This was possible due to the geometry of the complexes, where the absorbing Cu atoms are coplanar with the four N atoms forming the first coordination shell of the complex. For this reason multiple scattering contributions become relevant, thus allowing determination of higher shells. This knowledge has been used to gain information about the structure of the 1:2 complexes formed by Cu(II) ions with the amino acids histidine and glycine, both showing a high affinity for Cu(II) ions. The in-solution structure of these complexes, particularly that with histidine, is not clear yet, probably due to the various possible coordination modes. In this case the square-planar arrangements glycine-histamine and histamine-histamine as well as tetrahedral coordination modes have been considered. The obtained first-shell Cu-N coordination distance for this complex is 1.99 A. The results of the higher shells EXAFS analysis point to the fact that the predominant coordination mode is the so-called histamine-histamine one in which both histidine molecules coordinate Cu(II) cations through N atoms from the amino group and from the imidazole ring.


Subject(s)
Copper/chemistry , Histidine/chemistry , Metalloproteins/chemistry , Models, Chemical , Organometallic Compounds/chemistry , Absorptiometry, Photon , Binding Sites , Dipeptides/chemistry , Glycine/chemistry , Ligands
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