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1.
BMC Genomics ; 22(Suppl 5): 917, 2022 Apr 13.
Article in English | MEDLINE | ID: mdl-35418014

ABSTRACT

BACKGROUND: Many long non-coding RNAs (lncRNAs) have been extensively identified in higher eukaryotic species. The function of lncRNAs has been reported to play important roles in diverse biological processes, including developmental regulation and behavioral plasticity. However, there are no reports of systematic characterization of long non-coding RNAs in the fire ant Solenopsis invicta. RESULTS: In this study, we performed a genome-wide analysis of lncRNAs in the brains of S. invicta from RNA-seq. In total, 1,393 novel lncRNA transcripts were identified in the fire ant. In contrast to the annotated lncRNA transcripts having at least two exons, novel lncRNAs are monoexonic transcripts with a shorter length. Besides, the transcriptome from virgin alate and dealate mated queens were analyzed and compared. The results showed 295 differentially expressed mRNA genes (DEGs) and 65 differentially expressed lncRNA genes (DELs) between virgin and mated queens, of which 17 lncRNAs were highly expressed in the virgin alates and 47 lncRNAs were highly expressed in the mated dealates. By identifying the DEL:DEG pairs with a high association in their expression (Spearman's |rho|> 0.8 and p-value < 0.01), many DELs were co-regulated with DEGs after mating. Furthermore, several remarkable lncRNAs (MSTRG.6523, MSTRG.588, and nc909) that were found to associate with particular coding genes may play important roles in the regulation of brain gene expression in reproductive transition in fire ants. CONCLUSION: This study provides the first genome-wide identification of S. invicta lncRNAs in the brains in different reproductive states. It will contribute to a fuller understanding of the transcriptional regulation underpinning reproductive changes.


Subject(s)
Ants , RNA, Long Noncoding , Animals , Ants/genetics , Brain/metabolism , Female , Gene Expression Profiling , RNA, Long Noncoding/genetics , RNA, Long Noncoding/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Transcriptome
2.
Antioxidants (Basel) ; 10(4)2021 Apr 06.
Article in English | MEDLINE | ID: mdl-33917369

ABSTRACT

Hyperuricemia is the main cause of gout and involved in the occurrence of many other diseases such as hyperlipidemia and hypertension correlated with metabolic disorders. Chrysin is a flavonoid compound found naturally in honey, propolis, and mushrooms and has anti-inflammatory and antioxidant effects. However, its mechanism of action is not clear yet. This study investigated the mechanism of chrysin's anti-hyperuricemic effect in hyperuricemia-induced rats fed with high-fructose corn syrup. Orally administrated chrysin for 28 consecutive days effectively decreased uric acid by inhibiting the activity of xanthine oxidase (XO) in the liver. Moreover, chrysin markedly downregulated the protein expression of uric acid transporter 1 (URAT1) and glucose transporter type 9 (GLUT9) and upregulated the protein expression of organic anion transporter 1 (OAT1) and human ATP-binding cassette subfamily G-2 (ABCG2). In addition, chrysin showed prominent anti-oxidative and inflammatory effects as the malondialdehyde (MDA) and interleukin 1 beta (IL-1ß) concentration was reduced in both rat kidney and serum, which aligned with the inhibition of NOD-like receptor family pyrin domain containing 3 (NLRP3) inflammasome signaling pathway activation. Collectively, our results strongly suggest that chrysin exhibits potent anti-hyperuricemic and anti-inflammatory effects that may yield new adjuvant treatments for gout.

3.
Biochem Biophys Res Commun ; 495(1): 197-203, 2018 01 01.
Article in English | MEDLINE | ID: mdl-29113798

ABSTRACT

The fucoxanthin, isolated from brown algae, was reported to have multiple biological functions to anti-inflammation, anti-tumor, and ameliorated obesity in mice. In this study we investigated whether fucoxanthin could inhibit lipids accumulation in FL83B hepatocytes. FL83B cells were induced as fatty liver cell model by 0.5 mM oleic acid for 48 h, and treated with various concentration of fucoxanthin for 24 h. The results demonstrated that fucoxanthin significantly suppressed lipid accumulation and decreased lipid peroxidation in hepatocytes. Fucoxanthin could decrease lipogenesis-related transcription factor expression, including sterol regulatory element-binding proteins 1c and peroxisome proliferator-activated receptor γ. It also reduced fatty acid synthase expression and increased adipose triglyceride lipase and the phosphorylation of hormone-sensitive lipase production for lipolysis. Furthermore, fucoxanthin significantly increased phosphorylation of AMP-activated protein kinase (AMPK), and decreased activity of acetyl-CoA carboxylase for regulating fatty acid synthesis. The results suggest that fucoxanthin is an effective marine nature compound for increasing lipolysis and inhibiting lipogenesis in oleic acid induced fatty liver cells through promoted Sirt1/AMPK pathway.


Subject(s)
AMP-Activated Protein Kinases/metabolism , Anti-Obesity Agents/pharmacology , Fatty Acids/metabolism , Hepatocytes/drug effects , Lipogenesis/drug effects , Sirtuin 1/metabolism , Xanthophylls/pharmacology , Animals , Cell Line , Hepatocytes/metabolism , Lipolysis/drug effects , Mice , Signal Transduction/drug effects
4.
Mediators Inflamm ; 2016: 3630485, 2016.
Article in English | MEDLINE | ID: mdl-26880863

ABSTRACT

Matrine is isolated from Sophora flavescens and shows anti-inflammatory effects in macrophages. Here we evaluated matrine's suppressive effects on cyclooxygenase 2 (COX-2) and intercellular adhesion molecule-1 (ICAM-1) expressions in lipopolysaccharide- (LPS-) stimulated human lung epithelial A549 cells. Additionally, BALB/c mice were given various matrine doses by intraperitoneal injection, and then lung injury was induced via intratracheal instillation of LPS. In LPS-stimulated A549 cells, matrine inhibited the productions of interleukin-8 (IL-8), monocyte chemotactic protein-1, and IL-6 and decreased COX-2 expression. Matrine treatment also decreased ICAM-1 protein expression and suppressed the adhesion of neutrophil-like cells to inflammatory A549 cells. In vitro results demonstrated that matrine significantly inhibited mitogen-activated protein kinase phosphorylation and decreased nuclear transcription factor kappa-B subunit p65 protein translocation into the nucleus. In vivo data indicated that matrine significantly inhibited neutrophil infiltration and suppressed productions of tumor necrosis factor-α and IL-6 in mouse bronchoalveolar lavage fluid and serum. Analysis of lung tissue showed that matrine decreased the gene expression of proinflammatory cytokines, chemokines, COX-2, and ICAM-1. Our findings suggest that matrine improved lung injury in mice and decreased the inflammatory response in human lung epithelial cells.


Subject(s)
Acute Lung Injury/chemically induced , Acute Lung Injury/drug therapy , Alkaloids/therapeutic use , Cyclooxygenase 2/metabolism , Intercellular Adhesion Molecule-1/metabolism , Lipopolysaccharides/toxicity , Lung/metabolism , Quinolizines/therapeutic use , Animals , Cell Line , Cell Survival/drug effects , Female , Humans , Immunoblotting , Lung/drug effects , Mice , Mice, Inbred BALB C , Matrines
5.
Biomed Microdevices ; 8(3): 215-25, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16718406

ABSTRACT

This study reports an integrated microfluidic chip for polymerase chain reaction (PCR) applications utilizing digital microfluidic chip (DMC) technology. Several crucial procedures including sample transportation, mixing, and DNA amplification were performed on the integrated chip using electro-wetting-on-dielectric (EWOD) effect. An innovative concept of hydrophobic/hydrophilic structure has been successfully demonstrated to integrate the DMC chip with the on-chip PCR device. Sample droplets were generated, transported and mixed by the EWOD-actuation. Then the mixture droplets were transported to a PCR chamber by utilizing the hydrophilic/hydrophobic interface to generate required surface tension gradient. A micro temperature sensor and two micro heaters inside the PCR chamber along with a controller were used to form a micro temperature control module, which could perform precise PCR thermal cycling for DNA amplification. In order to demonstrate the performance of the integrated DMC/PCR chips, a detection gene for Dengue II virus was successfully amplified and detected. The new integrated DMC/PCR chips only required an operation voltage of 12V(RMS) at a frequency of 3 KHz for digital microfluidic actuation and 9V(DC) for thermal cycling. When compared to its large-scale counterparts for DNA amplification, the developed system consumed less sample and reagent and could reduce the detection time. The developed chips successfully demonstrated the feasibility of Lab-On-a-Chip (LOC) by utilizing EWOD-based digital microfluidics.


Subject(s)
Dengue Virus , Microchemistry/instrumentation , Microfluidic Analytical Techniques/instrumentation , Microfluidics/instrumentation , RNA, Viral/analysis , Reverse Transcriptase Polymerase Chain Reaction/instrumentation , Dengue Virus/genetics , Microchemistry/methods , Microfluidic Analytical Techniques/methods , Microfluidics/methods , RNA, Viral/genetics , Reverse Transcriptase Polymerase Chain Reaction/methods
6.
Langmuir ; 22(1): 484-9, 2006 Jan 03.
Article in English | MEDLINE | ID: mdl-16378463

ABSTRACT

The electrowetting on dielectric (EWOD) technique has considerable potential for microfluidic and biomedical applications. The Lippmann-Young model based on the force balance concept has long been used to predict the contact angles of droplets under electrowetting. However, recent experimental evidence has indicated that this model fails to provide accurate predictions of the lower contact angles associated with saturation conditions at higher electric potentials. Hence, the study simulates the internal flow in an actuated droplet and treats it as stagnation-point flow. This kinetic energy is then taken into consideration while calculating the contact angles using an energy balance model. The energy of an actuated droplet is contributed by the combination of the side surface tension energy, the base tension energy, the dielectric energy, and the kinetic energy when deriving the energy balance model. Consequently, the new energy balance model modifies the Lippmann-Young equation, thereby providing enhanced reasonable predictions of the droplet contact angle across the higher electric potential where the contact angles are close to the saturated condition.

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