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2.
Sci Rep ; 12(1): 1871, 2022 02 03.
Article in English | MEDLINE | ID: mdl-35115580

ABSTRACT

Two sources of emotions influence directed actions, namely, those associated with the environment and those that are consequences of the action. The present study examines the impact of these emotions on movement preparation. It invokes theories from psychology, i.e., ideomotor theory and motor control's cognitive approach through movement analysis. In addition to their action readiness, emotions related to the environment can interfere with actions directed towards a goal. However, intentional action involves a goal that will cause satisfaction when achieved. While most studies consider each emotion's influence separately, few studies confront them to study their respective impact. In the current study, thirty-two right-handed young adults reach for a left target with a stylus that will reduce or enlarge an emotional picture that is initially present (nontarget stimulus). Kinematic analyses show that anticipating the pointing's emotional consequences impacts the final pointing position. All other results emphasize the impact of reducing or enlarging on the preparation and control of movement depending on the direction of movement. The emotional consequences of the action is a weighting factor that is relevant to the action goal and subject's intention, but it is less important than the action's visual consequences.


Subject(s)
Arm/innervation , Emotions , Movement , Psychomotor Performance , Visual Perception , Adolescent , Adult , Anticipation, Psychological , Biomechanical Phenomena , Female , Humans , Male , Photic Stimulation , Reaction Time , Time Factors , Young Adult
3.
Genome Biol Evol ; 3: 102-13, 2011.
Article in English | MEDLINE | ID: mdl-21183607

ABSTRACT

Many noncoding regions of genomes appear to be essential to genome function. Conservation of large numbers of noncoding sequences has been reported repeatedly among mammals but not thus far among birds and reptiles. By searching genomes of chicken (Gallus gallus), zebra finch (Taeniopygia guttata), and green anole (Anolis carolinensis), we quantified the conservation among birds and reptiles and across amniotes of long, conserved noncoding sequences (LCNS), which we define as sequences ≥500 bp in length and exhibiting ≥95% similarity between species. We found 4,294 LCNS shared between chicken and zebra finch and 574 LCNS shared by the two birds and Anolis. The percent of genomes comprised by LCNS in the two birds (0.0024%) is notably higher than the percent in mammals (<0.0003% to <0.001%), differences that we show may be explained in part by differences in genome-wide substitution rates. We reconstruct a large number of LCNS for the amniote ancestor (ca. 8,630) and hypothesize differential loss and substantial turnover of these sites in descendent lineages. By contrast, we estimated a small role for recruitment of LCNS via acquisition of novel functions over time. Across amniotes, LCNS are significantly enriched with transcription factor binding sites for many developmental genes, and 2.9% of LCNS shared between the two birds show evidence of expression in brain expressed sequence tag databases. These results show that the rate of retention of LCNS from the amniote ancestor differs between mammals and Reptilia (including birds) and that this may reflect differing roles and constraints in gene regulation.


Subject(s)
Birds/genetics , Conserved Sequence , Evolution, Molecular , Genome/genetics , Reptiles/genetics , Animals , Base Sequence , Birds/classification , Chickens/classification , Chickens/genetics , Computational Biology , Dogs , Expressed Sequence Tags , Finches/classification , Finches/genetics , Genomics , Humans , Lizards/genetics , Mice , Phylogeny , Reptiles/classification , Transcription Factors/metabolism
4.
Int J Obes Relat Metab Disord ; 27(3): 319-25, 2003 Mar.
Article in English | MEDLINE | ID: mdl-12629558

ABSTRACT

OBJECTIVE: Previous in vitro experiments, as well as acute assays in rat showed that the C-terminal domain (CT-domain) of porcine pancreatic lipase behaves as a potent specific noncovalent inhibitor of pancreatic lipase. Nevertheless, the potential use of the CT-domain as a therapeutic tool against obesity in humans requires further investigation and would be best achieved using the human CT-domain. In the present study, we investigated the inhibitory effects of the recombinant human CT-domain, in vivo, upon chronic administration to rats fed a high-fat diet. DESIGN AND MEASUREMENT: The long-term in vivo study requiring relatively high amounts of the human CT-domain, the domain was overexpressed in Escherichia coli as inclusion bodies and an efficient refolding protocol was designed. The inhibitory effect of the recombinant human CT-domain on the activity of pancreatic lipase from different species was first investigated in vitro. Then chronic assays were performed for 4 weeks in rats fed a high-fat diet with or without a daily dose of 1.2 mg of CT-domain per kilogram rat. The time course of food intake, body weight, plasma parameters, liver lipids, faecal output of fat and total cholesterol were measured. RESULTS: A high yield of correctly folded recombinant human CT-domain was obtained using our refolding process, as evidenced by the capability of the recombinant domain to inhibit human horse and porcine pancreatic lipases in vitro. The recombinant human CT-domain had no influence on the food intake, but significantly reduced the body weight gain. As compared to control rats, higher amounts of total fat (mainly triglycerides and monoglycerides) and total cholesterol were found in the faeces of the rats treated with the CT-domain. Finally, a decrease in liver triglycerides and nonesterified cholesterol was observed while no significant effect could be detected on the plasma parameters. CONCLUSIONS: These results demonstrated that the CT-domain efficiently reduces in vivo, lipolysis and subsequently body weight gain in rat fed a high-fat diet. The CT-domain could, therefore, be effective in preventing obesity.


Subject(s)
Dietary Fats/administration & dosage , Enzyme Inhibitors/pharmacology , Lipase/antagonists & inhibitors , Lipolysis/drug effects , Animals , Humans , Lipase/chemistry , Lipid Metabolism , Liver/metabolism , Male , Pancreas/enzymology , Rats , Rats, Wistar , Recombinant Proteins/pharmacology , Weight Gain/drug effects
5.
J Biol Chem ; 276(17): 14014-8, 2001 Apr 27.
Article in English | MEDLINE | ID: mdl-11154696

ABSTRACT

In vertebrates, dietary fat digestion mainly results from the combined effect of pancreatic lipase, colipase, and bile. It has been proposed that in vivo lipase adsorption on oil-water emulsion is mediated by a preformed lipase-colipase-mixed micelle complex. The main lipase-colipase binding site is located on the C-terminal domain of the enzyme. We report here that in vitro the isolated C-terminal domain behaves as a potent noncovalent inhibitor of lipase and that the inhibitory effect is triggered by the presence of micelles. Lipase inhibition results from the formation of a nonproductive C-terminal domain-colipase-micelle ternary complex, which competes for colipase with the active lipase-colipase-micelle ternary complex, thus diverting colipase from its lipase-anchoring function. The formation of such a complex has been evidenced by molecular sieving experiments. This nonproductive complex lowers the amount of active lipase thus reducing lipolysis. Preliminary experiments performed in rats show that the C-terminal domain also behaves as an inhibitor in vivo and thus could be considered a potential new tool for specifically reducing intestinal lipolysis.


Subject(s)
Enzyme Inhibitors/pharmacology , Lipase/chemistry , Pancreas/enzymology , Animals , Binding Sites , Chromatography, Gel , Colipases/chemistry , Colipases/isolation & purification , Kinetics , Lipase/isolation & purification , Male , Micelles , Models, Molecular , Protein Binding , Protein Conformation , Protein Structure, Tertiary , Rats , Rats, Wistar , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
6.
FEBS Lett ; 482(1-2): 109-12, 2000 Sep 29.
Article in English | MEDLINE | ID: mdl-11018532

ABSTRACT

Colipase is a small protein (10 kDa), which acts as a protein cofactor for the pancreatic lipase. Various models of the activated ternary complex (lipase-colipase-bile salt micelles) have been proposed using detergent micelles, but no structural information has been established with bile salt micelles. We have investigated the organization of sodium taurodeoxycholate (NaTDC) micelles and their interactions with pig and horse colipases by homonuclear nuclear magnetic resonance (NMR) spectroscopy. The NMR data supply evidence that the folding of horse colipase is similar to that already described for pig colipase. Intermolecular nuclear Overhauser effects have shown that two conserved aromatic residues interact with NaTDC micelles.


Subject(s)
Bile Acids and Salts/chemistry , Colipases/chemistry , Taurodeoxycholic Acid/chemistry , Amino Acid Sequence , Animals , Horses , Micelles , Molecular Conformation , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Pancreas/chemistry , Protein Conformation , Sequence Alignment , Sequence Homology, Amino Acid , Swine
7.
J Biol Chem ; 275(6): 4220-4, 2000 Feb 11.
Article in English | MEDLINE | ID: mdl-10660587

ABSTRACT

In the duodenum, pancreatic lipase (PL) develops its activity on triglycerides by binding to the bile-emulsified oil droplets in the presence of its protein cofactor pancreatic colipase (PC). The neutron crystal structure of a PC-PL-micelle complex (Hermoso, J., Pignol, D., Penel, S., Roth, M., Chapus, C., and Fontecilla-Camps, J. C. (1997) EMBO J. 16, 5531-5536) has suggested that the stabilization of the enzyme in its active conformation and its adsorption to the emulsified oil droplets are mediated by a preformed lipase-colipase-micelle complex. Here, we correlate the ability of different amphypathic compounds to activate PL, with their association with PC-PL in solution. The method of small angle neutron scattering with D(2)O/H(2)O contrast variation was used to characterize a solution containing PC-PL complex and taurodeoxycholate micelles. The resulting radius of gyration (56 A) and the match point of the solution indicate the formation of a ternary complex that is similar to the one observed in the neutron crystal structure. In addition, we show that either bile salts, lysophospholipids, or nonionic detergents that form micelles with radii of gyration ranging from 13 to 26 A are able to bind to the PC-PL complex, whereas smaller micelles or nonmicellar compounds are not. This further supports the notion of a micelle size-dependent affinity process for lipase activation in vivo.


Subject(s)
Lipase/chemistry , Micelles , Pancreas/enzymology , Animals , Bile Acids and Salts/pharmacology , Colipases/chemistry , Detergents/pharmacology , Deuterium Oxide , Enzyme Activation , Models, Molecular , Pancrelipase/chemistry , Paraoxon/pharmacology , Particle Size , Phospholipids/pharmacology , Scattering, Radiation , Taurodeoxycholic Acid/chemistry
8.
J Biol Chem ; 273(50): 33604-9, 1998 Dec 11.
Article in English | MEDLINE | ID: mdl-9837944

ABSTRACT

Among the polar interactions occurring in pancreatic lipase/colipase binding, only one ion pair involving lysine 400 on lipase and glutamic acid 45 on colipase has been described. These residues are strictly conserved among species, suggesting that the ion pair is likely to play an important role. Therefore, in order to prevent this interaction, mutations intended to neutralize or inverse the charge of these residues have been introduced in the cDNAs encoding horse lipase and colipase. The recombinant proteins have been expressed in insect cells, and their catalytic properties have been investigated. In all cases, preventing the formation of the correct ion pair Lys400/Glu45 leads to lipase-colipase complexes of reduced affinity unable to perform an efficient catalysis, notably in the presence of bile salt micelles. Diethyl p-nitrophenyl phosphate inhibition experiments with either mutant lipase or mutant colipase indicate a poor stabilization of the lipase flap. These results suggest that the ion pair plays a critical role in the active conformation of the lipase-colipase-micelle ternary complex by contributing to a correct orientation of colipase relative to lipase resulting in a proper opening of the flap.


Subject(s)
Colipases/metabolism , Lipase/metabolism , Animals , Bile Acids and Salts , Catalysis , Cell Line , Colipases/chemistry , Colipases/genetics , DNA, Complementary , Glutamic Acid/metabolism , Horses , Lipase/chemistry , Lipase/genetics , Micelles , Models, Molecular , Mutagenesis, Site-Directed
9.
Chem Phys Lipids ; 93(1-2): 123-9, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9720254

ABSTRACT

The catalytic activity of most lipases depends on the aggregation state of their substrates. It is supposed that lipase activation requires the unmasking and structuring of the enzyme's active site through conformational changes involving the presence of oil-in-water droplets. This phenomenon has been called interfacial activation. Here, we report the crystal structure of the pancreatic activated lipase/colipase/micelle complex as determined using the D2O/H2O contrast variation low resolution neutron diffraction method. We find that a disk-shaped micelle interacts extensively with the concave face of colipase (CL) and the distal tip of the C-terminal domain of lipase away from the active site of the enzyme. Such interaction appears to help stabilizing the lipase-CL interaction. Consequently, we conclude that lipase activation is not interfacial but occurs in the aqueous phase and it is mediated by CL and a micelle.


Subject(s)
Colipases/metabolism , Lipase/metabolism , Micelles , Animals , Binding Sites , Colipases/chemistry , Crystallography/methods , Enzyme Activation , Lipase/chemistry , Neutrons , Protein Conformation , Protein Structure, Secondary , Swine
10.
Biochem Biophys Res Commun ; 246(2): 513-7, 1998 May 19.
Article in English | MEDLINE | ID: mdl-9610393

ABSTRACT

Besides the active pancreatic lipase (PL) which plays a major role in dietary fat digestion, the presence of a pancreatic lipase related protein 1 (PLRP1) displaying a very low lipolytic activity has been reported in vertebrates. It has been suggested that the reduced lipolytic activity of PLRP1 results from specific features of the N-terminal domain of the protein. Therefore, based on sequence comparison between PL and PLRP1 and modelling experiments, several residues located in the vicinity of the active site pocket of both enzymes have been mutated. In this paper, we report that, as regards to PL, two substitutions in positions 179 and 181 in PLRP1 account for the very low lipolytic activity of the protein. Indeed, substituting these residues (V179 and A181) in PLRP1 for those found in PL (A179 and P181), restores a significant lipolytic activity for PLRP1.


Subject(s)
Lipase/genetics , Lipase/metabolism , Pancreas/enzymology , Point Mutation , Animals , Base Sequence , Binding Sites/genetics , DNA Primers/genetics , Dogs , Horses , In Vitro Techniques , Kinetics , Lipase/chemistry , Lipolysis/genetics , Models, Molecular , Mutagenesis, Site-Directed , Protein Conformation , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Swine
11.
Protein Eng ; 11(2): 135-42, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9605548

ABSTRACT

The existence of pancreatic lipase-related protein 1 (PLRP1) in vertebrates has been postulated based on the screening of pancreatic cDNA libraries from different species. In this paper, we report the presence of variable amounts of PLRP1 relative to colipase-dependent lipase (PL) in adults from several species. Only a very low lipase activity could be detected for native or recombinant PLRP1 using a large variety of substrates and conditions. Interestingly, this activity is dependent on the presence of bile salts and colipase and PLRP1 is shown to possess the same affinity as PL for colipase. Modelling investigations revealed some interesting differences between PLRP1 and PL, notably concerning substitutions in the C-terminal domain which might affect the bending motion of this domain relative to the N-terminal domain in PLRP1. The potential impact of these differences on the lack of lipase activity of PLRP1 was investigated using chimeric proteins designed by C-terminal domain exchange between dog PLRP1 and horse PL. Analysis of the catalytic properties of the chimera clearly indicated that the C-terminal domain exchange neither inactivates the horse enzyme nor results in an active dog PLRP1. From these findings, it can be concluded that the PLRP1 C-terminal domain is fully functional with respect to colipase binding. The lack of lipase activity or the still undetermined function of PLRP1 is likely to result mainly from particular features of the N-terminal domain.


Subject(s)
Lipase/analysis , Pancreas/enzymology , Amino Acid Sequence , Animals , Catalysis , Cats , Colipases/metabolism , Dogs , Horses , Lipase/chemistry , Lipase/metabolism , Models, Molecular , Molecular Sequence Data , Rats , Recombinant Fusion Proteins , Sequence Homology , Species Specificity
12.
EMBO J ; 16(18): 5531-6, 1997 Sep 15.
Article in English | MEDLINE | ID: mdl-9312012

ABSTRACT

The concept of lipase interfacial activation stems from the finding that the catalytic activity of most lipases depends on the aggregation state of their substrates. It is thought that activation involves the unmasking and structuring of the enzyme's active site through conformational changes requiring the presence of oil-in-water droplets. Here, we present the neutron structure of the activated lipase-colipase-micelle complex as determined using the D2O/H2O contrast variation low resolution diffraction method. In the ternary complex, the disk-shaped micelle interacts extensively with the concave face of colipase and the distal tip of the C-terminal domain of lipase. Since the micelle- and substrate-binding sites concern different regions of the protein complex, we conclude that lipase activation is not interfacial but occurs in the aqueous phase and is mediated by colipase and a micelle.


Subject(s)
Colipases/chemistry , Colipases/metabolism , Lipase/chemistry , Lipase/metabolism , Models, Molecular , Protein Conformation , Animals , Binding Sites , Crystallography/methods , Enzyme Activation , Horses , Micelles , Models, Chemical , Neutrons , Protein Structure, Secondary , Swine
13.
Protein Eng ; 9(8): 707-11, 1996 Aug.
Article in English | MEDLINE | ID: mdl-8875648

ABSTRACT

The organization of the pancreatic lipase in two well defined domains has been correlated to a specific function for each domain, catalytic activity for the N-terminal domain and colipase binding for the C-terminal domain. In order to see if such an organization implies that the two domains can behave as separate entities, we expressed the N- and C-terminal domains in insect cells. The recombinant proteins secreted in the cell supernatants present the expected molecular properties. However, whereas the C-terminal domain retains its function of colipase binding, the N-terminal domain appears to be unable to ensure catalysis. The lack of activity of the recombinant N-terminal domain could result either from a (partially) incorrect folding or from an incapacity to function by itself. These results suggest that, although both are structurally well defined, the two domains of the pancreatic lipase behave differently when they are expressed as separate entities.


Subject(s)
Colipases/metabolism , Lipase/metabolism , Pancreas/enzymology , Animals , Base Sequence , Blotting, Western , DNA, Complementary/chemistry , Electrophoresis, Polyacrylamide Gel , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Swine
14.
J Biol Chem ; 271(30): 18007-16, 1996 Jul 26.
Article in English | MEDLINE | ID: mdl-8663362

ABSTRACT

The crystal structure of the ternary porcine lipase-colipase-tetra ethylene glycol monooctyl ether (TGME) complex has been determined at 2.8 A resolution. The crystals belong to the cubic space group F23 with a = 289.1 A and display a strong pseudo-symmetry corresponding to a P23 lattice. Unexpectedly, the crystalline two-domain lipase is found in its open configuration. This indicates that in the presence of colipase, pure micelles of the nonionic detergent TGME are able to activate the enzyme; a process that includes the movement of an N-terminal domain loop (the flap). The effects of TGME and colipase have been confirmed by chemical modification of the active site serine residue using diisopropyl p-nitrophenylphosphate (E600). In addition, the presence of a TGME molecule tightly bound to the active site pocket shows that TGME acts as a substrate analog, thus possibly explaining the inhibitory effect of this nonionic detergent on emulsified substrate hydrolysis at submicellar concentrations. A comparison of the lipase-colipase interactions between our porcine complex and the human-porcine complex (van Tilbeurgh, H., Egloff, M.-P., Martinez, C., Rugani, N., Verger, R., and Cambillau, C.(1993) Nature 362, 814-820) indicates that except for one salt bridge interaction, they are conserved. Analysis of the superimposed complexes shows a 5.4 degrees rotation on the relative position of the N-terminal domains excepting the flap that moves in a concerted fashion with the C-terminal domain. This flexibility may be important for the binding of the complex to the water-lipid interface.


Subject(s)
Colipases/chemistry , Detergents/chemistry , Ethylene Glycols/chemistry , Lipase/chemistry , Animals , Binding Sites , Crystallography, X-Ray , Enzyme Activation , Enzyme Inhibitors , Glycoproteins/chemistry , Lipase/antagonists & inhibitors , Models, Molecular , Pancreas/enzymology , Protein Conformation , Swine
15.
J Mol Biol ; 252(1): 20-4, 1995 Sep 08.
Article in English | MEDLINE | ID: mdl-7666429

ABSTRACT

The crystal structure of a cleaved form of porcine zymogen E has been solved by molecular replacement using the bovine procarboxypeptidase A-S6 subunit III structure as search model. Crystallographic refinement using simulated annealing and energy minimization techniques resulted in a final R-factor of 0.189 for all data between 8 and 2.3 A resolution. The zymogen E three-dimensional model is very close to that of bovine subunit III and represents the second member of the zymogen E family for which the crystal structure is known. The two structures indicate that, in contrast to trypsinogen and chymotrypsinogen, zymogens of this family are highly organized molecules. The amino acid sequence of zymogen E has only been determined for the first 40 residues. Based on the electron density map, we have introduced six sequence changes relative to subunit III. Out of the 11 residues in the activation peptide, only the first six present well matching electron density; they are connected to the rest of the zymogen by an unexpected Cys1-Cys122 disulphide bridge (according to the bovine chymotrypsinogen A numbering system). Amino acid sequencing of protein solutions both from dissolved crystals and from the initial stock clearly indicated that the Val17-Asn18 bond had been cleaved during the crystallization process. This result adds weight to the assumption that the autolysis of the bovine zymogen E gives rise to subunit III and that this maybe a regulatory mechanism for protease E activity.


Subject(s)
Enzyme Precursors/ultrastructure , Serine Endopeptidases/ultrastructure , Amino Acid Sequence , Animals , Crystallography, X-Ray , Models, Molecular , Molecular Sequence Data , Sequence Alignment , Sequence Homology, Amino Acid , Swine
16.
Biochim Biophys Acta ; 1213(3): 357-60, 1994 Aug 04.
Article in English | MEDLINE | ID: mdl-8049250

ABSTRACT

Pancreatic colipase plays an essential role in the intestinal fat digestion by anchoring lipase on lipid/water interfaces in the presence of bile salts. In contrast to other species, two molecular forms of colipase, A and B, have been found in horse. The two corresponding cDNAs were isolated from a horse pancreatic library and their nucleotide sequences were determined. Moreover, for the first time, active colipase has been obtained after transfection of COS cells by either colipase A or B cDNA.


Subject(s)
Colipases/genetics , Pancreas/enzymology , Amino Acid Sequence , Animals , Base Sequence , Cell Line , Cloning, Molecular , DNA, Complementary/genetics , Gene Expression , Horses , Molecular Sequence Data , Transfection
17.
J Mol Biol ; 238(5): 709-32, 1994 May 20.
Article in English | MEDLINE | ID: mdl-8182745

ABSTRACT

Pancreatic lipase (EC 3.1.1.3) plays a key role in dietary fat digestion by converting triacylglycerols into 2-monoacylglycerols and free fatty acids in the intestine. Although the crystallographic structures of the human pancreatic lipase and of a human lipase-porcine colipase complex have been solved, no refined structure of pancreatic lipase has yet been published. The crystal structure of the horse enzyme was solved by the molecular replacement method from the model of the human pancreatic lipase and subsequently refined to 2.3 A resolution. The final model contains two molecules of 449 amino acid residues each in the asymmetric unit, 705 well-defined water molecules and two calcium ions. The two molecules in the asymmetric unit of the orthorhombic crystals are related by a 2-fold non-crystallographic symmetry axis as in the case of the human lipase. However, the association between the two molecules in their respective crystal forms is different. The overall molecular structure of the horse lipase is very similar to that of the human enzyme. The horse lipase is made up of two well-defined domains. The N-terminal domain which bears the active centre has a typical alpha/beta hydrolase fold topology. The C-terminal domain which is devoted to colipase binding has a beta-sheet sandwich topology. Comparison of equivalent C alpha atom positions between the final model of the horse lipase and the human lipase structure shows only slight differences which are mainly located in the C-terminal domain. The horse enzyme possesses the common features of the known mammalian and microbial lipases, in particular the "flap" covering the catalytic triad. In addition to more precise information concerning these features, the elucidation of the horse lipase crystal structure allowed us to better understand the structural basis of the kinetic behaviour of pancreatic lipases towards a soluble substrate, p-nitrophenyl acetate, and the different sensitivity of these enzymes towards limited proteolysis.


Subject(s)
Lipase/chemistry , Pancreas/enzymology , Protein Structure, Tertiary , Amino Acid Sequence , Animals , Binding Sites , Crystallography, X-Ray , Horses , Humans , Hydrogen Bonding , Models, Molecular , Molecular Sequence Data , Molecular Structure , Protein Structure, Secondary , Sequence Alignment
18.
EMBO J ; 13(8): 1763-71, 1994 Apr 15.
Article in English | MEDLINE | ID: mdl-8168476

ABSTRACT

Subunit III, a defective serine endopeptidase lacking the typical N-terminal hydrophobic dipeptide is secreted by the pancreas of ruminant species as part of the bovine ternary complex procarboxypeptidase A-S6. Two monoclinic crystal forms were obtained and subsequently used to solve its X-ray structure. The highest resolution model of subunit III was refined at 1.7 A resolution to a crystallographic R-factor of 18.4%, with r.m.s. bond deviations from ideality of 0.012 A. About 80% of the model presents the characteristic architecture of trypsin-like proteases. The remaining zones, however, have well-defined, unique conformations. The regions from residues 70 to 80 and from 140 to 155 present maximum distances of 16 and 18 A relative to serine proteases and zymogens. Comparisons with the structures of porcine elastase 1 and chymotrypsinogen A indicate that the specific binding pocket of subunit III adopts a zymogen-like conformation and thus provide a basis for its inactivity. In general, the structural analysis of subunit III strongly suggests that it corresponds to a truncated version of a new class of highly structured elastase-like zymogen molecules. Based on the structures of subunit III and elastase 1, it is concluded that large concerted movements are necessary for the activation of zymogen E.


Subject(s)
Enzyme Precursors/chemistry , Multienzyme Complexes/chemistry , Animals , Cattle , Crystallography, X-Ray , Enzyme Activation , Enzyme Precursors/metabolism , Hydrogen Bonding , Models, Molecular , Motion , Multienzyme Complexes/metabolism , Pancreas/enzymology , Protein Conformation , Serine Endopeptidases/chemistry , Serine Endopeptidases/metabolism
19.
Eur J Biochem ; 206(1): 279-87, 1992 May 15.
Article in English | MEDLINE | ID: mdl-1587279

ABSTRACT

The complete sequence of the horse pancreatic lipase was elucidated by combining polypeptide chain and cDNA sequencing. Among the structural features of horse lipase, it is worth mentioning that Lys373 is not conserved. This residue, which is present in human, porcine and canine lipases, has been assumed to be involved in p-nitrophenyl acetate hydrolysis by pancreatic lipases. Kinetic investigation of the p-nitrophenyl acetate hydrolysis by the various pancreatic lipases and by the C-terminal domain (336-449) of human lipase reveals that this hydrolysis is the result of the superimposition of independent events; a specific linear hydrolysis occurring at the active site of lipase, a fast acylation depending on the presence of Lys373 and a non-specific hydrolysis most likely occurring in the C-terminal domain of the enzyme. This finding definitely proves that pancreatic lipase bears only one active site and raises the question of a covalent catalysis by pancreatic lipases. Moreover, based on sequence comparison with the above-mentioned pancreatic lipases, three residues located in the C-terminal domain, Lys349, Lys398 and Lys419, are proposed as possible candidates for lipase/colipase binding.


Subject(s)
DNA/genetics , Lipase/genetics , Nitrophenols/metabolism , Pancreas/enzymology , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , DNA/isolation & purification , Dogs , Horses , Humans , Hydrolysis , Kinetics , Lipase/metabolism , Molecular Sequence Data , Pancreatic Juice/enzymology , Sequence Homology, Nucleic Acid , Swine
20.
Biochem Biophys Res Commun ; 184(1): 206-11, 1992 Apr 15.
Article in English | MEDLINE | ID: mdl-1567428

ABSTRACT

After a selective cleavage of a lipase/colipase cross-linked complex, the colipase has been shown to be bound to a 5 kDa lipase fragment identified as the C-terminal extremity of the chain extending from residue 403 to the C-terminus (Cys 449). The colipase binding site on lipase is therefore localized in a restricted contact area. Moreover, from sequence comparison of lipase from various species, an acidic residue, Glu 440, is likely to be involved in ion pairing with colipase.


Subject(s)
CME-Carbodiimide/analogs & derivatives , Carbodiimides/pharmacology , Colipases/metabolism , Lipase/metabolism , Pancreas/enzymology , Amino Acid Sequence , Animals , Binding Sites , Cross-Linking Reagents/pharmacology , Electrophoresis, Polyacrylamide Gel , Humans , Lipase/isolation & purification , Molecular Sequence Data , Molecular Weight , Peptide Fragments/metabolism , Sequence Homology, Nucleic Acid , Swine , Tryptophan
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