ABSTRACT
Epigenetic mechanisms in crops have emerged as a fundamental factor in plant adaptation and acclimation to biotic and abiotic stresses. Among described epigenetic mechanisms, DNA methylation has been defined as the most studied epigenetic modification involved in several developmental processes. It has been shown that contrasting methylation marks are associated with gene expression variations between cultivated and wild crop species. In this study, we analyzed single-base resolution methylome maps for Oryza sativa (a cultivated species) and Oryza glumaepatula (a wild species) genotypes grown under control conditions. Our results showed that overall, genome-wide methylation profiles are mainly conserved between both species, nevertheless, there are several differentially methylated regions with species-specific methylation patterns. In addition, we analyzed the association of identified DNA methylation marks in relation with Aluminum-tolerance levels of studied genotypes. We found several differentially methylated regions (DMRs) and DMR-associated genes (DAGs) that are linked with Al tolerance. Some of these DAGs have been previously reported as differentially expressed under Al exposure in O. sativa. Complementarily a Transposable Elements (TE) analysis revealed that specific aluminum related genes have associated-TEs potentially regulated by DNA methylation. Interestingly, the DMRs and DAGs between Al-tolerant and susceptible genotypes were different between O. sativa and O. glumaepatula, suggesting that methylation patterns related to Al responses are unique for each rice species. Our findings provide novel insights into DNA methylation patterns in wild and cultivated rice genotypes and their possible role in the regulation of plant stress responses.
ABSTRACT
Some deleterious effects of drought, soil salinity and other abiotic stresses are mediated by the generation of oxidative stress through an increase in reactive oxygen species (ROS) that damage cellular membranes, proteins and DNA. In response to increased ROS, plants activate an array of enzymatic and non-enzymatic antioxidant defences. We have correlated the activation of these responses with the contrasting tolerance to salinity and drought of three species of the genus Juncus, viz. J. maritimus, J. acutus (both halophytes) and J. articulatus (salt-sensitive). Both stresses were given for 8 weeks to 6-week-old seedlings in a controlled environment chamber. Each stress inhibited growth and degraded photosynthetic pigments in the three species with the most pronounced effects being in J. articulatus. Salt and water stress also generated oxidative stress in all three taxa with J. articulatus being the most affected in terms of accumulation of malondialdehyde (a reliable oxidative stress marker). The apparent lower oxidative stress in halophytic J. maritimus and J. acutus compared with salt-sensitive J. articulatus is explained by a more efficient activation of antioxidant systems since salt or water deficiency induced a stronger accumulation of antioxidant phenolic compounds and flavonoids in J. maritimus and J. acutus than in J. articulatus. Qualitative and quantitative differences in antioxidant enzymes were also detected when comparing the three species and the two stress treatments. Accordingly, glutathione reductase and superoxide dismutase activities increased in the two halophytes under both stresses, but only in response to drought in J. articulatus. In contrast, ascorbate peroxidase activity varied between and within species according to treatment. These results show the relative importance of different antioxidant responses for stress tolerance in species with distinct ecological requirements. The salt-sensitive J. articulatus, contrary to the tolerant taxa, did not activate enzymatic antioxidant responses to salinity-induced oxidative stress.
ABSTRACT
Dittrichia viscosa is a Mediterranean ruderal species that over the last decades has expanded into new habitats, including coastal salt marshes, ecosystems that are per se fragile and threatened by human activities. To assess the potential risk that this native-invasive species represents for the genuine salt marsh vegetation, we compared its distribution with that of Inula crithmoides, a taxonomically related halophyte, in three salt marshes located in "La Albufera" Natural Park, near the city of Valencia (East Spain). The presence of D. viscosa was restricted to areas of low and moderate salinity, while I. crithmoides was also present in the most saline zones of the salt marshes. Analyses of the responses of the two species to salt and water stress treatments in controlled experiments revealed that both activate the same physiological stress tolerance mechanisms, based essentially on the transport of toxic ions to the leaves-where they are presumably compartmentalized in vacuoles-and the accumulation of specific osmolytes for osmotic adjustment. The two species differ in the efficiency of those mechanisms: salt-induced increases in Na(+) and Cl(-) contents were higher in I. crithmoides than in D. viscosa, and the osmolytes (especially glycine betaine, but also arabinose, fructose and glucose) accumulated at higher levels in the former species. This explains the (slightly) higher stress tolerance of I. crithmoides, as compared to D. viscosa, established from growth inhibition measurements and their distribution in nature. The possible activation of K(+) transport to the leaves under high salinity conditions may also contribute to salt tolerance in I. crithmoides. Oxidative stress level-estimated from malondialdehyde accumulation-was higher in the less tolerant D. viscosa, which consequently activated antioxidant responses as a defense mechanism against stress; these responses were weaker or absent in the more tolerant I. crithmoides. Based on these results, we concluded that although D. viscosa cannot directly compete with true halophytes in highly saline environments, it is nevertheless quite stress tolerant and therefore represents a threat for the vegetation located on the salt marshes borders, where several endemic and threatened species are found in the area of study.
