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1.
Pathogens ; 10(5)2021 May 03.
Article in English | MEDLINE | ID: mdl-34063639

ABSTRACT

Aichi virus (AiV) belongs to the genus Kobuvirus of the family Picornaviridae; it is a single-stranded positive-sense RNA virus without an envelope. AiV causes acute gastroenteritis, abdominal pain, nausea, vomiting, and fever. Low incidence and high seroprevalence of AiV infections have been reported in several regions of the world; however, little was known on the prevalence of AiV infections in Taiwan. This study described the first two cases of AiV infection and analyzed AiV seroprevalence in Taiwan. A total of 700 sera were collected from a single hospital in southern Taiwan. The neutralization assay was employed to assess AiV neutralization antibodies in the serum. The test identified 48 positive cases, with a seroprevalence of 6.86%. Results also showed a gradual increase in AiV seroprevalence rate with age. Compared with other countries, Taiwan had a relatively low AiV seroprevalence, suggesting a low incidence of or sporadic AiV infections.

2.
J Clin Nurs ; 30(23-24): 3590-3600, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34114285

ABSTRACT

AIMS AND OBJECTIVES: This study aimed to explore the status of nursing staff's workplace bullying, personality traits, social support and mental health, to find out the predictors of nursing staff's health, and to explore whether social support is a mediator to regulate the impact of workplace bullying on mental health. BACKGROUND: Bullying could cause physical and psychological problems, and nursing workplace bullying causes not only health problems of nursing staff but also patient safety problems. "Workplace bullying" is a worthy topic to pay attention to. Only limited studies could be discovered about the mediating effects between workplace bullying and health. METHODS: Cross-sectional and correlation designs were used. The STROBE was used as a checklist for this study. RESULTS: The results showed that the frequency of poor sleep quality ≥3 days in recent 2 weeks (p < .001), external control personality traits (p = .016), workplace bullying (p < .001) and less social support (p = .001) were the main predictors of the health problems among nurses, and social support was the mediator between workplace bullying and health problems. CONCLUSION: It is recommended that hospital managers should apply regular sleep-wake schedule by designing a biological clock-compliant shift in order to promote good sleep hygiene of the nurses. Providing educational programmes and building up policies to decrease workplace bullying and increase social supports are suggested. RELEVANCE TO CLINICAL PRACTICE: Hospital managers should provide education and training related to the prevention of bullying and establish communication and consultation channels for the bullied. Nursing managers should also educate nurses to establish effective social networks with family, friends and colleagues to prevent health problems.


Subject(s)
Bullying , Nurse Administrators , Nursing Staff, Hospital , Cross-Sectional Studies , Hospitals , Humans , Personality , Social Support , Surveys and Questionnaires , Workplace
3.
JBI Evid Implement ; 19(3): 315-326, 2021 Apr 09.
Article in English | MEDLINE | ID: mdl-33843766

ABSTRACT

OBJECTIVE: The aim of this evidence implementation project was to identify the barriers and omissions affecting adequacy of hemodialysis and to develop implementable strategies to maintain hemodialysis adequacy among hemodialysis patients with end-stage renal disease. INTRODUCTION: Assessing adequacy of hemodialysis and improving quality of life are important issues for patients with end-stage renal disease. However, they are often inadequately addressed, and evidence-based practices are not always followed. METHODS: A clinical audit was undertaken using the Joanna Briggs Institute Practical Application of Clinical Evidence System and Getting Research into Practice approaches. Seven audit criteria that represent best practice recommendations for maintaining hemodialysis adequacy among hemodialysis patients were used. A baseline audit was performed, which was followed by the implementation of multiple improvement strategies over 20 weeks and the outcomes finalized using a follow-up audit to determine the change to be implemented in practice. RESULTS: The baseline audit results showed that most audit criteria were less than 77% in practice. The compliance rates for nurses who had received education regarding hemodialysis, checking the prescription order for each patient at each session, and using the prescribed dialyzer for every session were determined to have reached 100% at the follow-up audit. The compliance rates for completion prehemodialysis checks, using a sterile technique when inserting an arteriovenous catheter, matching a blood flow rate with the prescription, and maintaining a blood flow rate throughout the treatment session were found to be 73-95% at the follow-up audit. The most significant finding was the proportion of hemodialysis patients with inadequate urea reduction ratio was reduced from 4.6 to 3.2% after implementation of the best practice approaches. CONCLUSION: The implementation of institution-specific evidence-based resources brought about immediate improvements in hemodialysis adequacy management and practice. A variety of strategies contributed to the success of this implementation project, such as scenario simulation education, Objective Structured Clinical Examination, the interrelation response system Kahoot, the use of hemodialysis International Organization for Standardization job descriptions, regular weekly audits, and collaboration with physicians when caring for patients during clinical practice.


Subject(s)
Quality of Life , Renal Dialysis , Clinical Audit , Evidence-Based Practice , Hospitals , Humans
4.
Contemp Nurse ; 56(3): 242-254, 2020.
Article in English | MEDLINE | ID: mdl-32746719

ABSTRACT

Background: Ineffective medical treatment could be avoided if patients had completed advance directives documents in advance. Aims: This study aimed to explore the predictors for the intentions of signing advance directives among dialysis patients. Methods: This cross-sectional study recruited 209 dialysis patients by using structured questionnaires. The Statistical Package for the Social Sciences (Version 17) (SPSS/IBM Inc., Chicago, IL, USA) was used for data analysis. Results: The predictors for the intention of signing the advance directives documents were having information on palliative care, the participants' knowing about the advanced directives documents, and their having more knowledge of advance care plans. Conclusions: Health care workers may strengthen the patient's knowledge of an "advance care plan" by health education during the dialysis treatment and provide information on websites for the patients. Impact statement: Hospital managers should train their staff to provide health teachings for an advance care plan.


Subject(s)
Advance Care Planning/standards , Advance Directives/psychology , Palliative Care/psychology , Palliative Care/standards , Patient Education as Topic/standards , Practice Guidelines as Topic , Renal Dialysis/psychology , Adolescent , Adult , Aged , Aged, 80 and over , Cross-Sectional Studies , Female , Humans , Male , Middle Aged , Surveys and Questionnaires , Taiwan , Young Adult
5.
Int J Nurs Pract ; 26(6): e12806, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32048415

ABSTRACT

AIMS: This study aims to explore nurses' demographic data, assertiveness, psychosocial work condition, and workplace bullying, and find the predictors of workplace bullying. METHODS: This study adopted a cross-sectional design. A stratified sample comprising 241 nurses from a regi onal teaching hospitals in Taiwan was selected from the 10th to the 23rd September, 2018. Data were analysed by using the SPSS Statistics 17.0. Descriptive statistics (frequency, percentage, mean, and standard deviation), one-way Anova, t test, Pearson's correlation, and multiple linear regressions were used. RESULTS: The results showed that the participants with "past bullying experience," "lower self-assertiveness," "higher work psychological demands," "lower workplace justice," "lower labour participation," and "lower overall social support" are more likely to experience workplace bullying. CONCLUSIONS: Hospital managers should pay attention to the problem of nursing workplace bullying. First of all, hospital managers should encourage curriculum on nursing workplace bullying and incorporate nursing workplace bullying prevention training courses in curriculum planning.


Subject(s)
Assertiveness , Bullying/psychology , Nursing Staff, Hospital/psychology , Workplace/psychology , Adult , Cross-Sectional Studies , Female , Hospitals, Teaching , Humans , Male , Surveys and Questionnaires , Taiwan
6.
J Clin Nurs ; 28(19-20): 3691-3699, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31216385

ABSTRACT

AIMS AND OBJECTIVES: To analyse the relationship among hospital nurses' socio-demographic data, work stress, humor and health conditions, and to determine the predictors of nurses' health status. BACKGROUND: Humor can decrease the feelings of helplessness, fear and anxiety, and that may result in the development of positive emotions, which might have a good impact on health. DESIGN: This research applied cross-sectional designs and used structured questionnaires which included socio-demographic data, an Effort-Reward Imbalance questionnaire (ERI), humor and 12-item Chinese health questionnaires (CHQ). A total of 236 nurses in a regional hospital in Taiwan were recruited. SPSS was used for the data analysis in the study. The STROBE was chosen as a checklist for this study. RESULTS: The results showed that the significant predictors of the participants' health were "whether experienced significant life events during the past 3 months," "the degree of work stress" and the level of "humor." CONCLUSIONS: It is recommended that administrators pay attention to the cultivation of nursing staff's humor, such as providing nurses with musical CDs or humorous books and providing stress management training courses to nurses. RELEVANCE TO CLINICAL PRACTICE: It is necessary for hospital managers to determine and deal with the causes of work stress to avoid the development of health problems in the nursing personnel. Furthermore, in order to develop stress-releasing strategies, it is necessary to provide nurses with stress management and resilience enhancement courses. Cultivating a humor competency of nurses is also recommended to alleviate the work stress.


Subject(s)
Health Status , Nursing Staff, Hospital/psychology , Occupational Stress/psychology , Wit and Humor as Topic , Adult , Cross-Sectional Studies , Female , Humans , Male , Surveys and Questionnaires , Taiwan , Young Adult
7.
Viruses ; 10(12)2018 12 12.
Article in English | MEDLINE | ID: mdl-30545147

ABSTRACT

Parechovirus A (Human parechovirus, HPeV) causes symptoms ranging from severe neonatal infection to mild gastrointestinal and respiratory disease. Use of molecular approaches with RT-PCR and genotyping has improved the detection rate of HPeV. Conventional methods, such as viral culture and immunofluorescence assay, together with molecular methods facilitate comprehensive viral diagnosis. To establish the HPeV immunofluorescence assay, an antibody against HPeV capsid protein VP0 was generated by using antigenic epitope prediction data. The specificity of the anti-HPeV VP0 antibody was demonstrated on immunofluorescence assay, showing that this antibody was specific for HPeV but not enteroviruses. A total of 74 HPeV isolates, 7 non⁻polio-enteroviruses and 12 HPeV negative cell culture supernatant were used for evaluating the efficiency of the anti-HPeV VP0 antibody. The sensitivity of HPeV detection by the anti-HPeV VP0 antibody was consistent with 5'untranslated region (UTR) RT-PCR analysis. This study established comprehensive methods for HPeV detection that include viral culture and observation of cytopathic effect, immunofluorescence assay, RT-PCR and genotyping. The methods were incorporated into our routine clinical practice for viral diagnosis. In conclusion, this study established a protocol for enterovirus and HPeV virus identification that combines conventional and molecular methods and would be beneficial for HPeV diagnosis.


Subject(s)
Parechovirus/isolation & purification , Picornaviridae Infections/diagnosis , Antibodies, Viral/immunology , Antibody Specificity , Capsid Proteins/immunology , Clinical Laboratory Techniques , Fluorescent Antibody Technique, Direct , Genotyping Techniques , Humans , Parechovirus/genetics , RNA, Viral/isolation & purification , Real-Time Polymerase Chain Reaction
8.
Contemp Nurse ; 54(2): 182-194, 2018 Apr.
Article in English | MEDLINE | ID: mdl-30051772

ABSTRACT

BACKGROUND: Nurses with obesity will lead to health problems as well as their high turnover rate and low retention rate. OBJECTIVES: This study explored the associations with female nurses' work stress, social support and overweight/obesity, and tried to find the predictors of the female nurses' overweight/obesity. METHODS: The study applied a cross-sectional and correlational design. FINDINGS: The results of this study showed that "regular exercise frequency lower than or equal to 2 days a week", "rotating night shifts greater than or equal to 4 times a month", "nursing working hours higher than 44 hours a week", "high work stress", and "low social support" were the main predictors of "overweight/ obesity". CONCLUSIONS: Conducting workshops were recommended to nurse managers to motivate female nurses' exercise frequency, remind female nurses of keeping a healthy diet during night shifts, and provide female nurses with some relaxing skills to release their work stress.


Subject(s)
Burnout, Professional , Nursing Staff, Hospital/psychology , Obesity/psychology , Overweight/psychology , Social Support , Adult , Cross-Sectional Studies , Exercise , Female , Humans , Risk Factors , Stress, Psychological , Taiwan , Work Schedule Tolerance
9.
Sci Rep ; 8(1): 8821, 2018 06 11.
Article in English | MEDLINE | ID: mdl-29891869

ABSTRACT

Coxsackievirus (CV)-B5 is a common human enterovirus reported worldwide; swine vesicular disease virus (SVDV) is a porcine variant of CV-B5. To clarify the transmission dynamics and molecular basis of host switching between CV-B5 and SVDV, we analysed and compared the VP1 and partial 3Dpol gene regions of these two viruses. Spatiotemporal dynamics of viral transmission were estimated using a Bayesian statistical inference framework. The detected selection events were used to analyse the key molecules associated with host switching. Analyses of VP1 sequences revealed six CV-B5 genotypes (A1-A4 and B1-B2) and three SVDV genotypes (I-III). Analyses of partial 3Dpol revealed five clusters (A-E). The genotypes evolved sequentially over different periods, albeit with some overlap. The major hub of CV-B5 transmission was in China whereas the major hubs of SVDV transmission were in Italy. Network analysis based on deduced amino acid sequences showed a diverse extension of the VP1 structural protein, whereas most sequences were clustered into two haplotypes in the partial 3Dpol region. Residue 178 of VP1 showed four epistatic interactions with residues known to play essential roles in viral host tropism, cell entry, and viral decoating.


Subject(s)
Coxsackievirus Infections/veterinary , Coxsackievirus Infections/virology , Enterovirus B, Human/classification , Enterovirus B, Human/genetics , Evolution, Molecular , Animals , Capsid Proteins/genetics , China/epidemiology , Cluster Analysis , Coxsackievirus Infections/epidemiology , DNA-Directed RNA Polymerases/genetics , Enterovirus B, Human/isolation & purification , Genetic Variation , Genotype , Humans , Italy/epidemiology , Phylogeny , Sequence Analysis, DNA , Spatio-Temporal Analysis , Swine , Swine Diseases/epidemiology , Swine Diseases/virology , Viral Proteins/genetics
10.
Jpn J Infect Dis ; 71(4): 291-297, 2018 Jul 24.
Article in English | MEDLINE | ID: mdl-29709990

ABSTRACT

To understand human parechovirus (HPeV) infections in Taiwanese children, we analyzed data for 112 children (age≤10 years) with HPeV infection diagnosed between July 2007 and June 2016 in a medical center in Kaohsiung, southern Taiwan. The patients were infected with HPeV1 (n=94), HPeV3 (n=3), HPeV4 (n=3), HPeV6 (n=1) and non-typeable HPeV (n=11). We compared the clinical implications for children younger than 3 months (n=56) and 3 months and older (n=31), excluding 25 children with concomitant infections. Fever was noted in almost half of the children younger than 3 months but was more frequent in older than in younger children (83.9% vs 46.4%). As compared with older children, children younger than 3 months had a lower incidence of respiratory symptoms (30.1% vs 83.9%), more frequently required intensive care unit admission (28.6% vs 3.2%), and had longer hospital stays (mean 10.95 vs 5.13 days). Importantly, about one-third of the children were suspected to have hospital-acquired or cluster infections in the environment of medical institutions, with a significantly high proportion of 42.9% (24/56) in younger infants. Hospital-acquired infections might play a key role in the spread of HPeV, especially in children younger than 3 months.


Subject(s)
Genotype , Parechovirus/isolation & purification , Picornaviridae Infections/epidemiology , Picornaviridae Infections/virology , Child , Child, Preschool , Female , Hospitals , Humans , Incidence , Infant , Infant, Newborn , Length of Stay , Male , Parechovirus/classification , Parechovirus/genetics , Picornaviridae Infections/pathology , Retrospective Studies , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Taiwan/epidemiology
11.
J Chin Med Assoc ; 80(11): 737-739, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28882730

ABSTRACT

The first human parechovirus 3 (HPeV3 VGHKS-2007) in Taiwan was identified from a clinical specimen from a male infant. The entire genome of the HPeV3 isolate was sequenced and compared to known HPeV3 sequences. Genome alignment data showed that HPeV3 VGHKS-2007 shares the highest nucleotide identity, 99%, with the Japanese strain of HPeV3 1361K-162589-Yamagata-2008. All HPeV3 isolates possess at least 97% amino acid identity. The analysis of the genome sequence of HPeV3 VGHKS-2007 will facilitate future investigations of the epidemiology and pathogenicity of HPeV3 infection.


Subject(s)
Genome, Viral , Parechovirus/genetics , Whole Genome Sequencing , Humans , Infant , Male , Sequence Alignment , Taiwan
12.
PLoS One ; 12(6): e0179455, 2017.
Article in English | MEDLINE | ID: mdl-28609453

ABSTRACT

BACKGROUND: Bile esculin azide with vancomycin (BEAV) medium is a sensitive, but slightly less specific method for vancomycin-resistant enterococci (VRE) screening. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a rapid method for identification of clinical pathogens. This study aimed to assess the performance of a novel combination screening test for VRE, using BEAV broth combined with MALDI-TOF MS. MATERIALS AND METHODS: Clinical specimens were collected from patients at risk of VRE carriage, and tested by the novel combination method, using selective BEAV broth culture method followed by MALDI-TOF MS identification (SBEAVM). The reference method used for comparison was the ChromID VRE agar method. RESULTS: A total of 135 specimens were collected from 78 patients, and 63 specimens tested positive for VRE positive using the ChromID VRE method (positive rate 46.7%). The sensitivity, specificity, positive predictive value, and negative predictive value of SBEAVM method after an incubation period of 28 hours were 93.7%, 90.3%, 89.4%, and 94.2%, respectively. The SBEAVM method when compared to the ChromID VRE method had a shorter turnaround time (29 vs. 48-72 hours) and lower laboratory cost ($2.11 vs. $3.23 per test). CONCLUSIONS: This study demonstrates that SBEAVM is a rapid, inexpensive, and accurate method for use in VRE screening.


Subject(s)
Gram-Positive Bacterial Infections/diagnosis , Mass Spectrometry/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Vancomycin-Resistant Enterococci/isolation & purification , Culture Media/chemistry , Gram-Positive Bacterial Infections/microbiology , Humans , Mass Screening/methods , Reproducibility of Results , Sensitivity and Specificity , Vancomycin-Resistant Enterococci/physiology
13.
PLoS Negl Trop Dis ; 11(4): e0005520, 2017 04.
Article in English | MEDLINE | ID: mdl-28379967

ABSTRACT

BACKGROUND: Dengue fever is an important arboviral disease. The clinical manifestations vary from a mild non-specific febrile syndrome to severe life-threatening illness. The virus can usually be detected in the blood during the early stages of the disease. Dengue virus has also been found in isolated cases in the cerebrospinal fluid, urine, nasopharyngeal sections and saliva. In this report, we describe the isolation of dengue virus from the upper respiratory tract of four confirmed cases of dengue. METHODS: We reviewed all laboratory reports of the isolation of dengue virus from respiratory specimens at the clinical microbiology laboratory of the Kaohsiung Veterans General Hospital during 2007 to 2015. We then examined the medical records of the cases from whom the virus was isolated to determine their demographic characteristics, family contacts, clinical signs and symptoms, course of illness and laboratory findings. RESULTS: Dengue virus was identified in four patients from a nasopharyngeal or throat culture. Two were classified as group A dengue (dengue without warning signs), one as group B (dengue with warning signs) and one as group C (severe dengue). All had respiratory symptoms. Half had family members with similar respiratory symptoms during the period of their illnesses. All of the patients recovered uneventfully. CONCLUSIONS: The isolation of dengue virus from respiratory specimens of patients with cough, rhinorrhea and nasal congestion, although rare, raises the possibility that the virus is capable of transmission by the aerosol route among close contacts. This concept is supported by studies that show that the virus can replicate in cultures of respiratory epithelium and can be transmitted through mucocutaneous exposure to blood from infected patients. However, current evidence is insufficient to prove the hypothesis of transmission through the respiratory route. Further studies will be needed to determine the frequency of respiratory colonization, viable virus titers in respiratory secretions and molecular genetic evidence of transmission among close contacts.


Subject(s)
Dengue Virus/isolation & purification , Respiratory System/virology , Severe Dengue/diagnosis , Severe Dengue/transmission , Adolescent , Aerosols , Child , Female , Fluorescent Antibody Technique, Indirect , Humans , Male , Middle Aged , RNA, Viral/isolation & purification , Taiwan
14.
BMC Bioinformatics ; 16: 302, 2015 Sep 21.
Article in English | MEDLINE | ID: mdl-26390997

ABSTRACT

BACKGROUND: Studies regarding coxsackievirus (CV) tend to focus on epidemic outbreaks, an imbalanced topology is considered to be an indication of acute infection with partial cross-immunity. In enteroviruses, a clear understanding of the characteristics of tree topology, transmission, and its demographic dynamics in viral succession and circulation are essential for identifying prevalence trends in endemic pathogens such as coxsackievirus B2 (CV-B2). This study applied a novel Bayesian evolutionary approach to elucidate the phylodynamic characteristics of CV-B2. A dataset containing 51 VP1 sequences and a dataset containing 34 partial 3D(pol) sequencing were analyzed, where each dataset included Taiwan sequences isolated during 1988-2013. RESULTS: Four and five genotypes were determined based on the 846-nucleotide VP1 and 441-nucleotide 3D(pol) (6641-7087) regions, respectively, with spatiotemporally structured topologies in both trees. Some strains with tree discordance indicated the occurrence of recombination in the region between the VP1 and 3D(pol) genes. The similarities of VP1 and 3D(pol) gene were 80.0%-96.8% and 74.7%-91.9%, respectively. Analyses of population dynamics using VP1 dataset indicated that the endemic CV-B2 has a small effective population size. The balance indices, high similarity, and low evolutionary rate in the VP1 region indicated mild herd immunity selection in the major capsid region. CONCLUSIONS: Phylodynamic analysis can reveal demographic trends and herd immunity in endemic pathogens.


Subject(s)
Coxsackievirus Infections/transmission , Coxsackievirus Infections/virology , Demography , Enterovirus/physiology , Phylogeny , Bayes Theorem , Child , Child, Preschool , Coxsackievirus Infections/epidemiology , Disease Outbreaks , Enterovirus/isolation & purification , Genotype , Humans , Infant , Phylogeography , RNA, Viral/genetics , Taiwan/epidemiology , Viral Proteins/genetics
15.
PLoS One ; 10(6): e0129272, 2015.
Article in English | MEDLINE | ID: mdl-26053872

ABSTRACT

The infectious activity of coxsackievirus B1 (CV-B1) in Taiwan was high from 2008 to 2010, following an alarming increase in severe neonate disease in the United States (US). To examine the relationship between CV-B1 strains isolated in Taiwan and those from other parts of the world, we performed a phylodynamic study using VP1 and partial 3Dpol (414 nt) sequences from 22 strains of CV-B1 isolated in Taiwan (1989-2010) and compared them to sequences from strains isolated worldwide. Phylogenetic trees were constructed by neighbor-joining, maximum likelihood, and Bayesian Monte Carlo Markov Chain methods. Four genotypes (GI-IV) in the VP1 region of CV-B1 and three genotypes (GA-C) in the 3Dpol region of enterovirus B were identified and had high support values. The phylogenetic analysis indicates that the GI and GIII strains in VP1 were geographically distributed in Taiwan (1993-1994) and in India (2007-2009). On the other hand, the GII and GIV strains appear to have a wider spatiotemporal distribution and ladder-like topology A stair-like phylogeny was observed in the VP1 region indicating that the phylogeny of the virus may be affected by different selection pressures in the specified regions. Further, most of the GI and GII strains in the VP1 tree were clustered together in GA in the 3D tree, while the GIV strains diverged into GB and GC. Taken together, these data provide important insights into the population dynamics of CV-B1 and indicate that incongruencies in specific gene regions may contribute to spatiotemporal patterns of epidemicity for this virus.


Subject(s)
Coxsackievirus Infections/transmission , Coxsackievirus Infections/virology , Enterovirus B, Human/physiology , Coxsackievirus Infections/epidemiology , Enterovirus B, Human/classification , Genetic Variation , Genotype , Humans , Multilocus Sequence Typing , Phylogeny , Population Surveillance , RNA, Viral , Recombination, Genetic , Taiwan/epidemiology
16.
PLoS One ; 10(2): e0116158, 2015.
Article in English | MEDLINE | ID: mdl-25646764

ABSTRACT

Human parechoviruses (HPeVs), members of the family Picornaviridae, are associated with severe human clinical conditions such as gastrointestinal disease, encephalitis, meningitis, respiratory disease and neonatal sepsis. A new contemporary strain of HPeV1, KVP6 (accession no. KC769584), was isolated from a clinical specimen. Full-genome alignment revealed that HPeV1 KVP6 shares high genome homology with the German strain of HPeV1, 7555312 (accession no. FM178558) and could be classified in the clade 1B group. An intertypic recombination was shown within the P2-P3 genome regions of HPeV1. Cell-type tropism test showed that T84 cells (colon carcinoma cells), A549 cells (lung carcinoma cells) and DBTRG-5MG cells (glioblastoma cells) were susceptible to HPeV1 infection, which might be relevant clinically. A facilitated cytopathic effect and increased viral titers were reached after serial viral passages in Vero cells, with viral genome mutation found in later passages. HPeV1 is sensitive to elevated temperature because 39C incubation impaired virion production. HPeV1 induced innate immunity with phosphorylation of interferon (IFN) regulatory transcription factor 3 and production of type I IFN in A549 but not T84 cells. Furthermore, type I IFN inhibited HPeV1 production in A549 cells but not T84 cells; T84 cells may be less responsive to type I IFN stimulation. Moreover, HPeV1-infected cells showed downregulated type I IFN activation, which indicated a type I IFN evasion mechanism. The characterization of the complete genome and infection features of HPeV1 provide comprehensive information about this newly isolated HPeV1 for further diagnosis, prevention or treatment strategies.


Subject(s)
Antiviral Agents/pharmacology , Genome, Viral/genetics , Interferon Type I/pharmacology , Parechovirus/genetics , Parechovirus/physiology , Picornaviridae Infections , Animals , Antiviral Agents/metabolism , Cell Line , Genomics , Humans , Interferon Type I/metabolism , Kinetics , Molecular Sequence Data , Parechovirus/drug effects , Signal Transduction , Temperature , Viral Tropism/drug effects , Virus Replication/drug effects
17.
Genome Announc ; 1(1)2013 Jan.
Article in English | MEDLINE | ID: mdl-23405311

ABSTRACT

The first Aichi virus (AiV), kvgh99012632/2010, was identified in Taiwan. The entire genome of the AiV isolate was sequenced and compared to known AiV sequences. Genome alignment revealed that the Taiwan AiV strain shares 96.3% nucleotide and 99% amino acid identities with the German strain D/VI2287/2004.

18.
Appl Microbiol Biotechnol ; 97(19): 8529-36, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23306637

ABSTRACT

Aichi virus (AiV) is an emerging single-stranded, positive-sense, non-enveloped RNA virus in the Picornaviridae that causes acute gastroenteritis in humans. The first case of AiV infection in Taiwan was diagnosed in a human neonate with enterovirus-associated symptoms; the virus was successfully isolated and propagated. To establish a method to detect AiV, we analyzed the antigen epitope and generated a polyclonal antibody against AiV viral protein 1 (VP1). This peptide-purified anti-AiV VP1 antibody showed high specificity against AiV VP1 without cross-reaction to nine other tested strains of Picornaviruses. The anti-AiV VP1 antibody was used in immunofluorescence analysis, immunoblotting, and enzyme-linked immunosorbent assay to elucidate the cell tropism and replication kinetics of AiV. Use of the anti-AiV VP1 antibody also revealed AiV infection restriction with interferon type I and polyI/C antiviral treatment. The AiV infection and detection system may provide an in vitro platform for AiV virology study.


Subject(s)
Antibodies, Viral , Antigens, Viral/analysis , Kobuvirus/isolation & purification , Picornaviridae Infections/virology , Viral Proteins/analysis , Virology/methods , Antibodies, Viral/immunology , Antigens, Viral/immunology , Enzyme-Linked Immunosorbent Assay/methods , Epitopes/immunology , Fluorescent Antibody Technique, Direct/methods , Humans , Immunoblotting/methods , Taiwan , Viral Proteins/immunology
19.
J Microbiol Immunol Infect ; 44(2): 88-94, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21439509

ABSTRACT

Accurately differentiating tuberculous pleurisy from lung cancer is important for disease management but difficult using conventional laboratory methods. This study assessed the value of adenosine deaminase (ADA) and interferon gamma (IFN-γ) for differentiating the two conditions in a region of Taiwan with a high prevalence of tuberculosis. The study population comprised patients with lymphocytic exudative pleural effusions: tuberculous (n=24) and malignant (n=42). Mean levels of ADA and IFN-γ in pleural fluid, measured with commercial standardized kits, were significantly higher for tuberculous than for malignant pleurisy (p<0.001 for both). For differentiating the two effusions, results for ADA versus IFN-γ were: sensitivity, 70.8% versus 91.7%; specificity, 95.2% versus 97.6%; positive predictive value, 89.5% versus 96.7%; and negative predictive value, 85.1% versus 95.3%. IFN-γ allows precise diagnosis of pleural tuberculosis, but ADA is easier to use, has a low cost, and results are quickly available. Our study confirms previous studies and extends the usefulness of these diagnostic methods to a wider group of clinical laboratories by showing the reliability of standardized relatively inexpensive commercial kits. We recommend that initial ADA screening be used in conjunction with IFN-γ measurements for differential diagnosis of tuberculous pleurisy.


Subject(s)
Adenosine Deaminase/analysis , Exudates and Transudates , Interferon-gamma/analysis , Pleural Effusion, Malignant/diagnosis , Tuberculosis, Pleural/diagnosis , Adenosine Deaminase/metabolism , Adult , Aged , Aged, 80 and over , Body Fluids , Diagnosis, Differential , Female , Humans , Male , Middle Aged , Predictive Value of Tests , Sensitivity and Specificity , Taiwan/epidemiology , Tuberculosis, Pleural/metabolism
20.
Infect Genet Evol ; 10(6): 777-84, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20398802

ABSTRACT

Molecular epidemiological characteristics are needed to understand the impact of Coxsackievirus B3 (CV-B3) infection, since no CV-B3 genotyping literature is available. Twenty-nine CV-B3 Taiwan strains obtained from 1992 to 2005 were analyzed. A phylogenetic tree was constructed based on the 290 nucleotide sequence of the VP1 gene of Taiwan isolates and in 91 other CV-B3 GenBank sequences. Five genotypes (GI-GV) were depicted. The GI, GII, and GIII were dominant in America and Europe, whereas GIV and GV were prevalent in Asia. In Taiwan, a transient outbreak of GIV occurred in 2000, while GV has been the main genotype circulating since 1992. Patient age ranged from 0.1 to 81 months (median, 4.3 months). The male:female ratio was 1.9:1. More than 60% (17/29) of cases involved children younger than 1 year. Half of them contracted respiratory tract infection (12/24). Nine of the 24 (37.5%) cases with available medical records had central nervous system (CNS) involvement. Eight of the nine patients were younger than 3 months. The CV-B3 has evolved and circulated for the past 60 years. Although the nucleotide sequence of the VP1 is highly variably, amino acids were relatively conserved within the same genotype of CV-B3. CNS infections were not associated with a specific strain or genotype. The CV-B3 poses a significant health threat to children younger than 1 year, especially those younger than 3 months old.


Subject(s)
Coxsackievirus Infections/epidemiology , Coxsackievirus Infections/virology , Enterovirus B, Human/genetics , Americas/epidemiology , Amino Acid Sequence , Amino Acid Substitution , Child , Child, Preschool , Disease Outbreaks , Enterovirus B, Human/classification , Europe/epidemiology , Female , Genotype , Humans , Infant , Infant, Newborn , Male , Molecular Epidemiology , Molecular Sequence Data , Phylogeny , Sequence Homology, Amino Acid , Taiwan/epidemiology
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