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2.
J Clin Med ; 11(19)2022 Oct 03.
Article in English | MEDLINE | ID: mdl-36233722

ABSTRACT

Introduction: TTFields plus Temozolomide (TTFields/TMZ) extended survival versus TMZ alone in newly diagnosed glioblastoma (GBM) patients in the EF-14 trial. We have reported a retrospective analysis of newly diagnosed Chinese GBM patients who received TTFields/TMZ treatment and TMZ treatment from August 2018 to May 2021 in Huashan hospital in Shanghai. Methods: Overall survival (OS) and progression-free survival (PFS) curves were constructed using the Kaplan−Meier method. A Cox proportional hazards regression model, propensity score matched data, and inverse probability of treatment weighting (IPTW) based on propensity score were used to assess the effect of TTFields and account for confounding factors. Results: In the preliminary analysis, the median PFS in TTFields/TMZ group was 16 months (95% CI, 9.6−24.6) versus 11 months (95% CI, 9−12) in TMZ group (p < 0.05). Median overall survival was 21.8 months (95% CI, 17.4-NA) with TTFields/TMZ versus 15 months (HR = 0.43; 95% CI, 13−18) with TMZ alone. The multivariate analysis identified surgery type, STUPP scheme, IDH status, and TTFields use as favorable prognostic factors. After PSM adjustment, the variate among the groups was similar, except that the methylation rate of MGMT promoter remained high in the TMZ group (12 v 32 months; p = 0.011). Upon IPTW Survival analysis, TTFields was associated with a significantly lower risk of death (HR = 0.19 in OS; 95% CI, 0.09−0.41) and progression (HR = 0.35; 95% CI 0.14−0.9) compared with TMZ group. Conclusion: In the final analysis of our single-center Chinese patients with glioblastoma, adding TTFields to temozolomide chemotherapy resulted in statistically significant improvement in PFS and OS.

3.
Polymers (Basel) ; 13(18)2021 Sep 20.
Article in English | MEDLINE | ID: mdl-34578089

ABSTRACT

In this work, the development and application of multicomponents obtained from recycled polyethylene terephthalate (r-PET) waste and monotropic liquid crystals as anticorrosion coatings are reported. The r-PET raw material was alcoholyzed and reproduced as a thermoplastic polyester elastomer (TPEE) with different amounts (n%, n = 0, 1, 3, and 5) of 1,6-hexanediamine (HDA). Then, a fluorine-containing liquid crystal (4-cyano-3-fluorophenyl 4-ethylbenzoate (4CFE)) was incorporated into the TPEE mixture via solvent blending to modify and enhance the water resistance. The adhesion behavior of the coating on glass and iron substrates was evaluated by cross-cut tests and immersion tests in aqueous NaCl. In the corrosion resistance measurements, all of the coating samples fabricated with 10 ± 1 mm thickness were less active toward electrochemical corrosion (PEF% > 99%) than the bare iron plate, indicating that our work provided better protection against corrosion of the iron plate.

4.
Neural Netw ; 132: 96-107, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32861918

ABSTRACT

Convolutional neural networks (CNNs) are widely used to recognize the user's state through electroencephalography (EEG) signals. In the previous studies, the EEG signals are usually fed into the CNNs in the form of high-dimensional raw data. However, this approach makes it difficult to exploit the brain connectivity information that can be effective in describing the functional brain network and estimating the perceptual state of the user. We introduce a new classification system that utilizes brain connectivity with a CNN and validate its effectiveness via the emotional video classification by using three different types of connectivity measures. Furthermore, two data-driven methods to construct the connectivity matrix are proposed to maximize classification performance. Further analysis reveals that the level of concentration of the brain connectivity related to the emotional property of the target video is correlated with classification performance.


Subject(s)
Brain/physiology , Electroencephalography/methods , Emotions/physiology , Neural Networks, Computer , Algorithms , Brain-Computer Interfaces , Humans
5.
Brain Connect ; 9(6): 464-474, 2019 07.
Article in English | MEDLINE | ID: mdl-31219308

ABSTRACT

Due to technological advances, spatially indexed objects, such as blood oxygen level-dependent time series or electroencephalography data, are commonly observed across different scientific disciplines. Such object data are typically high dimensional and therefore challenging to handle. We propose a new approach for spatially indexed object data by mapping their spatial locations to a targeted one-dimensional interval so objects that are similar are placed near each other on the new target space. The proposed alignment not only provides a visualization tool for such complex object data but also facilitates a new way to study brain functional connectivity. Specifically, we introduce a new concept of path length to quantify the functional connectivity and a new community detection method. The advantages of the proposed methods are illustrated by simulations and in a study of functional connectivity for Alzheimer's disease.


Subject(s)
Brain Mapping/methods , Connectome/methods , Adult , Alzheimer Disease/physiopathology , Brain/physiopathology , Computer Simulation , Data Interpretation, Statistical , Electroencephalography/methods , Female , Functional Neuroimaging/methods , Humans , Machine Learning , Magnetic Resonance Imaging/methods , Male , Neural Pathways/physiopathology , Oxygen/analysis , Oxygen/blood
6.
Sensors (Basel) ; 19(5)2019 Mar 10.
Article in English | MEDLINE | ID: mdl-30857368

ABSTRACT

Viscosity is an important property of liquids. A viscosity change of aqueous substances that deviates from their normal levels usually implies a compromise in quality due to degradation or microorganism proliferation. Monitoring of macro-scale viscosity can be simply realized by various conventional tools, such as rotational viscometers, capillary tubes, falling bodies, and so forth. Nevertheless, today, micro-volume viscosity measurement remains a challenging endeavor, resulting in rare, expensive, or difficult-to-obtain samples not very well studied. For this reason, a novel technique for micro-viscosity based on rotational Brownian motion is presented in this paper. Janus microbeads were made by coating fluorescent polystyrene beads with gold film. Taking advantage of the bead configuration of half gold/half fluorescence, the rotational Brownian signal was expressed in terms of blinking fluorescent intensity. The characteristic correlation time was derived from the blinking intensity of trace amounts of a selected medium over a certain time period, and results were correlated with viscosity. Given a volume of only 2 µL for each measurement, calibration of a series of glycerol⁻water mixtures (100%⁻1% (v/v) water content) yielded good agreement with the expected viscosity predictions over the range of 0.8⁻574.8 cP. Five common oil products, including lubricant oil, baby oil, food oil, olive oil, and motor oil, were further investigated to demonstrate the feasibility and practicability of the proposed technique. Data measured by the rotational Brownian motion-based diffusometer were comparable with those measured by a commercial rotational viscometer. The method also explicitly showed viscosity degradation after the oils were heated at a high temperature of over 100 °C for 10 min. Evaluation proved the proposed Janus microbead-enabled rotational diffusometric technique to be a promising approach for rapid and micro-scale viscosity measurement.

7.
Brain Connect ; 9(1): 37-47, 2019 02.
Article in English | MEDLINE | ID: mdl-30265561

ABSTRACT

The use of correlation densities is introduced to quantify and provide visual interpretation for intraregional functional connectivity in the brain. For each brain region, pairwise correlations are computed between a seed voxel and other gray matter voxels within the region, and the distribution of the ensemble of these correlation values is represented as a probability density, the correlation density. The correlation density can be estimated by kernel smoothing. It provides an intuitive and comprehensive representation of subject-specific functional connectivity strength at the local level for each region. To address the challenge of interpreting and utilizing this rich connectivity information when multiple regions are considered, methods from functional data analysis are implemented, including a recently developed method of dimensionality reduction specifically tailored to the analysis of probability distributions. To illustrate the utility of these methods in neuroimaging, experiments were carried out to identify the associations between local functional connectivity and a battery of neurocognitive scores. These experiments demonstrate that correlation densities facilitate the discovery and interpretation of specific region-score associations.


Subject(s)
Brain/physiology , Connectome/methods , Magnetic Resonance Imaging , Alzheimer Disease/diagnostic imaging , Alzheimer Disease/physiopathology , Brain/diagnostic imaging , Cognition/physiology , Data Interpretation, Statistical , Humans , Image Processing, Computer-Assisted/methods , Neural Pathways/diagnostic imaging , Neural Pathways/physiology
8.
Nat Commun ; 9(1): 3171, 2018 08 09.
Article in English | MEDLINE | ID: mdl-30093687

ABSTRACT

Cushing's disease results from corticotroph adenomas of the pituitary that hypersecrete adrenocorticotropin (ACTH), leading to excess glucocorticoid and hypercortisolism. Mutations of the deubiquitinase gene USP8 occur in 35-62% of corticotroph adenomas. However, the major driver mutations in USP8 wild-type tumors remain elusive. Here, we report recurrent mutations in the deubiquitinase gene USP48 (predominantly encoding p.M415I or p.M415V; 21/91 subjects) and BRAF (encoding p.V600E; 15/91 subjects) in corticotroph adenomas with wild-type USP8. Similar to USP8 mutants, both USP48 and BRAF mutants enhance the promoter activity and transcription of the gene encoding proopiomelanocortin (POMC), which is the precursor of ACTH, providing a potential mechanism for ACTH overproduction in corticotroph adenomas. Moreover, primary corticotroph tumor cells harboring BRAF V600E are sensitive to the BRAF inhibitor vemurafenib. Our study thus contributes to the understanding of the molecular mechanism of the pathogenesis of corticotroph adenoma and informs therapeutic targets for this disease.


Subject(s)
Mutation , Pituitary ACTH Hypersecretion/genetics , Proto-Oncogene Proteins B-raf/genetics , Ubiquitin-Specific Proteases/genetics , Adenoma/genetics , Adult , Binding Sites , CpG Islands , DNA Mutational Analysis , Female , Humans , Male , Middle Aged , Phenotype , Pro-Opiomelanocortin/genetics , Sequence Analysis, DNA
9.
Mol Cell Probes ; 37: 32-38, 2018 02.
Article in English | MEDLINE | ID: mdl-29129659

ABSTRACT

OBJECTIVES: This study aimed to generate mutant mice containing the Acvrl1 gene flanked with LoxP sequences to allow conditional deletion of Acvrl1 by the LoxP/Cre system. Such mice may facilitate the development of brain arteriovenous malformation (BAVM) models. METHODS: The CRISPR/Cas9 technique was used to edit Acvrl1. Two single guide RNAs (sgRNAs) with recognition sites on intron 3 and 8 and a donor vector that was homologous with the targeted gene and contained two LoxP sequences were designed and constructed. The in vitro-synthesized sgRNA, Cas9 mRNA and donor vectors were injected into mouse zygotes, which were then transferred into pseudopregnant mice. Neonatal mutant mice were identified by genotyping and sequencing. RESULTS: Two mice with a floxed Acvrl1 allele were generated at a success rate of 8.7%. The target mice, which were healthy and fertile, were obtained through interbreeding. CONCLUSION: CRISPR/Cas9 is a reliable gene-editing tool, and is able to efficiently modify Acvrl1 and create the target mice.


Subject(s)
Activin Receptors, Type I/genetics , CRISPR-Associated Protein 9/genetics , CRISPR-Cas Systems/genetics , Gene Knockout Techniques , Mice, Knockout/genetics , Activin Receptors, Type II , Animals , Gene Editing , Gene Targeting , Genetic Vectors , Genotyping Techniques , Introns/genetics , Mice , RNA, Guide, Kinetoplastida/genetics , Zygote
10.
Am J Hum Genet ; 100(5): 817-823, 2017 May 04.
Article in English | MEDLINE | ID: mdl-28413019

ABSTRACT

Pituitary adenoma (PA) is one of the most common intracranial neoplasms. Several genetic predisposing factors for PA have been identified, but they account for a small portion of cases. In this study, we sought to identify the PA genetic risk factors by focusing on causative mutations for PAs. Among the 4 affected and 17 asymptomatic members from one family with familial PA, whole-exome sequencing identified cosegregation of the PA phenotype with the heterozygous missense mutation c.4136G>T (p.Arg1379Leu) in cadherin-related 23 (CDH23). This mutation causes an amino acid substitution in the calcium-binding motif of the extracellular cadherin (EC) domains of CDH23 and is predicted to impair cell-cell adhesion. Genomic screening in a total of 12 families with familial PA (20 individuals), 125 individuals with sporadic PA, and 260 control individuals showed that 33% of the families with familial PA (4/12) and 12% of individuals with sporadic PA (15/125) harbored functional CDH23 variants. In contrast, 0.8% of the healthy control individuals (2/260) carried functional CDH23 variants. Gene-based analysis also revealed a significant association between CDH23 genotype and PA (p = 5.54 × 10-7). Moreover, PA individuals who did not harbor functional CDH23 variants displayed tumors that were larger in size (p = 0.005) and more invasive (p < 0.001). Therefore, mutations in CDH23 are linked with familial and sporadic PA and could play important roles in the pathogenesis of PA.


Subject(s)
Cadherins/genetics , Germ-Line Mutation , Pituitary Neoplasms/genetics , Amino Acid Sequence , Cadherin Related Proteins , Case-Control Studies , Cell Adhesion , Genomics , Heterozygote , Humans , Pedigree , Phenotype , Protein Conformation , Risk Factors
11.
World Neurosurg ; 97: 93-97, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27713067

ABSTRACT

BACKGROUND: Intraoperative ultrasonography is widely used in neurosurgery for the management of intracerebral hematoma and brain tumor. However, the clinical value of this method in the surgery of cerebral arteriovenous malformations (AVMs) has not been reported. In this study, the application of intraoperative ultrasonography for AVM surgery was evaluated prospectively. METHODS: This prospective clinical study comprised 41 patients who underwent microsurgical resection of cerebral AVMs at our institute. After routine craniotomy, ultrasonographic imaging with color Doppler ultrasonography and real-time contrast-enhanced ultrasonographic angiography if necessary were applied as navigated images on the monitor during the operation. RESULTS: Ultrasonographic imaging made it easier to understand the vascular architecture during the operation. Color Doppler flow imaging clearly delineated the shape and margin of the AVMs. Intraoperative real-time contrast-enhanced ultrasonographic angiography enabled the surgeons to categorically identify AVM feeders both on the surface and deep in the tissue. CONCLUSIONS: Microneurosurgery with intraoperative ultrasonographic image guidance was a safe, effective, and reliable method for identifying the afferent and efferent vessels and for confirming the complete resection of AVMs. These benefits of image-guided microsurgery were mostly apparent for deep-seated AVMs that were not visible on the surface of the brain.


Subject(s)
Intracranial Arteriovenous Malformations/diagnostic imaging , Intracranial Arteriovenous Malformations/surgery , Neurosurgical Procedures/methods , Ultrasonography, Doppler, Color , Adolescent , Adult , Computed Tomography Angiography , Female , Humans , Male , Middle Aged , Monitoring, Intraoperative , Prospective Studies , Retrospective Studies , Young Adult
12.
J Neurooncol ; 127(1): 43-52, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26615563

ABSTRACT

Ependymoma typically has a better overall survival rate than most gliomas. Only a few comprehensive clinical studies have been published, but these are mostly from Western countries and use small sample sizes. Histopathological classification is not sufficient to show variable outcomes, and fails to show prognostic markers of the diverse outcomes; hence, it is essential to understand biological mechanisms. In this study, 176 ependymoma samples (World Health Organization grade II and III) were reviewed at Huashan Hospital. Both children and adults were included. We performed multifactorial analyses of clinical prognostic factors and the biomolecular marker expressions of nucleolin, epidermal growth factor receptor (EGFR) and caveolae-associated protein caveolin-1 by immunohistochemistry. We identified the probabilities of progression-free survival and overall survival using univariate and multivariate statistical methods. The participants were diagnosed with ependymomas between 2002 and 2010, including distributions of tumor locations in intracranial and extracranial regions. Nucleolin was overexpressed in 67 % of our samples, demonstrating a subgroup with poor outcome; particularly infratentorial and anaplastic ependymomas. There was no significant correlation between the expression of EGFR and caveolin-1 and clinical outcomes. Clinically, inferior prognosis was observed with regard to age (<18 years), intracranial location, high grade ependymomas, and incomplete resection. We found that nucleolin was an unfavorable prognostic predictor for ependymomas. Moreover, our findings show a subset of aggravating outcomes in high-grade and posterior fossa tumors.


Subject(s)
Biomarkers, Tumor/metabolism , Brain Neoplasms/pathology , Ependymoma/pathology , Phosphoproteins/metabolism , RNA-Binding Proteins/metabolism , Adolescent , Adult , Aged , Brain Neoplasms/metabolism , Child , Child, Preschool , Ependymoma/metabolism , Female , Follow-Up Studies , Humans , Immunoenzyme Techniques , Infant , Male , Middle Aged , Neoplasm Grading , Prognosis , Survival Rate , Young Adult , Nucleolin
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