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1.
Front Bioeng Biotechnol ; 10: 837813, 2022.
Article in English | MEDLINE | ID: mdl-35402407

ABSTRACT

Robust yeast strains that are tolerant to multiple stress environments are desired for an efficient biorefinery. Our previous studies revealed that zinc sulfate serves as an important nutrient for stress tolerance of budding yeast Saccharomyces cerevisiae. Acetic acid is a common inhibitor in cellulosic hydrolysate, and the development of acetic acid-tolerant strains is beneficial for lignocellulosic biorefineries. In this study, comparative proteomic studies were performed using S. cerevisiae cultured under acetic acid stress with or without zinc sulfate addition, and novel zinc-responsive proteins were identified. Among the differentially expressed proteins, the protein kinase Kic1p and the small rho-like GTPase Cdc42p, which is required for cell integrity and regulation of cell polarity, respectively, were selected for further studies. Overexpression of KIC1 and CDC42 endowed S. cerevisiae with faster growth and ethanol fermentation under the stresses of acetic acid and mixed inhibitors, as well as in corncob hydrolysate. Notably, the engineered yeast strains showed a 12 h shorter lag phase under the three tested conditions, leading to up to 52.99% higher ethanol productivity than that of the control strain. Further studies showed that the transcription of genes related to stress response was significantly upregulated in the engineered strains under the stress condition. Our results in this study provide novel insights in exploring zinc-responsive proteins for applications of synthetic biology in developing a robust industrial yeast.

2.
Prog Mol Subcell Biol ; 58: 61-83, 2019.
Article in English | MEDLINE | ID: mdl-30911889

ABSTRACT

Lignocellulosic biomass has been widely studied as the renewable feedstock for the production of biofuels and biochemicals. Budding yeast Saccharomyces cerevisiae is commonly used as a cell factory for bioconversion of lignocellulosic biomass. However, economic bioproduction using fermentable sugars released from lignocellulosic feedstocks is still challenging. Due to impaired cell viability and fermentation performance by various inhibitors that are present in the cellulosic hydrolysates, robust yeast strains resistant to various stress environments are highly desired. Here, we summarize recent progress on yeast strain development for the production of biofuels and biochemical using lignocellulosic biomass. Genome-wide studies which have contributed to the elucidation of mechanisms of yeast stress tolerance are reviewed. Key gene targets recently identified based on multiomics analysis such as transcriptomic, proteomic, and metabolomics studies are summarized. Physiological genomic studies based on zinc sulfate supplementation are highlighted, and novel zinc-responsive genes involved in yeast stress tolerance are focused. The dependence of host genetic background of yeast stress tolerance and roles of histones and their modifications are emphasized. The development of robust yeast strains based on multiomics analysis benefits economic bioconversion of lignocellulosic biomass.


Subject(s)
Biofuels/supply & distribution , Ethanol/metabolism , Genome-Wide Association Study , Lignin/metabolism , Saccharomyces cerevisiae/classification , Saccharomyces cerevisiae/metabolism , Gene Expression Profiling , Metabolomics , Proteomics , Saccharomyces cerevisiae/genetics
3.
Biochem Biophys Res Commun ; 508(4): 1279-1285, 2019 01 22.
Article in English | MEDLINE | ID: mdl-30573361

ABSTRACT

The aim of this study was to investigate the function of Cystic fibrosis transmembrane conductance regulator (CFTR) in human glioblastoma (GBM) cells. Data dining results of the Human Protein Atlas showed that low CFTR expression was associated with poor prognosis for GBM patients. We found that CFTR protein expression was lower in U87 and U251 GBM cells than that in normal humane astrocyte cells. CFTR activation significantly reduced GBM cell proliferation. In addition, CFTR activation significantly abrogated migration and invasion of GBM cells. Besides, CFTR activator Forskolin treatment markedly reduced MMP-2 protein expression. These effects of CFTR activation were significantly inhibited by CFTR inhibitor CFTRinh-172 pretreatment. Our findings suggested that JAK2/STAT3 signaling was involved in the anti-glioblastoma effects of CFTR activation. Moreover, CFTR overexpression in combination with Forskolin induced a synergistic anti-proliferative response in U87 cells. Overall, our findings demonstrated that CFTR activation suppressed GBM cell proliferation, migration and invasion likely through the inhibition of JAK2/STAT3 signaling.


Subject(s)
Brain Neoplasms/metabolism , Brain Neoplasms/pathology , Cell Movement , Cystic Fibrosis Transmembrane Conductance Regulator/metabolism , Glioblastoma/metabolism , Glioblastoma/pathology , Brain Neoplasms/genetics , Cell Line, Tumor , Cell Proliferation/genetics , Colforsin/pharmacology , Cystic Fibrosis Transmembrane Conductance Regulator/genetics , Gene Expression Regulation, Neoplastic , Glioblastoma/genetics , Humans , Janus Kinase 2 , Ki-67 Antigen/metabolism , Neoplasm Invasiveness , Prognosis , Proliferating Cell Nuclear Antigen/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , STAT3 Transcription Factor/metabolism , Signal Transduction/drug effects , Tumor Stem Cell Assay
4.
Aging (Albany NY) ; 10(12): 3774-3793, 2018 12 06.
Article in English | MEDLINE | ID: mdl-30523220

ABSTRACT

Increasing evidence has indicated the prognostic value of miR-433 across a series of malignancy types. However, the underlying mechanisms involved in cancer progression haven't been sufficiently elucidated. In the present work, we found that miR-433 was downregulated in CRC tissues and cell lines. Ectopic expression of miR-433 obviously suppressed the proliferation, invasion and metastasis activity of CRC cells in vitro and in vivo. CREB1, CCAR1 and JNK1 were highly expressed and negatively correlated with miR-433 expression in CRC. CRC patients with higher expression of CREB1, CCAR1 or JNK1 presented a worse outcome relative to those with lower expression. CREB1 transactivated the expression of miR-433, and CREB1, CCAR1 and JNK1 simultaneously served as its targets, which in turn composed a feedback loop between CREB1 and miR-433. miR-433 blocked cell cycle progression and abolished EMT. Collectively, our study demonstrated the CREB1/miR-433 reciprocal feedback loop restrained the propagation, invasion and metastasis activities of CRC cells through abrogation of cell cycle progression and constraint of EMT.


Subject(s)
Adenocarcinoma/pathology , Cell Proliferation/physiology , Colorectal Neoplasms/pathology , Cyclic AMP Response Element-Binding Protein/metabolism , MicroRNAs/metabolism , Neoplasm Metastasis , Animals , Cell Line, Tumor , Computational Biology , Cyclic AMP Response Element-Binding Protein/genetics , Gene Expression Regulation, Neoplastic , Humans , Mice , Mice, Nude , MicroRNAs/genetics , Neoplasms, Experimental
5.
Biomed Res Int ; 2017: 1038984, 2017.
Article in English | MEDLINE | ID: mdl-28567416

ABSTRACT

Aim. To demonstrate the regulatory role of miRNA in colorectal carcinoma (CRC) and reveal the transcript markers that may be associated with CRC clinical outcomes. Method. Herein, we analyzed both mRNA and miRNA gene expression profiles of 255 CRC tumor samples from The Cancer Genome Atlas project to reveal the regulatory association between miRNA and mRNA. Also, the potential role of gene coexpression network in CRC has been explored. Results. The negative correlation between miR-200c and DCN (Decorin) was calculated in CRC, indicating that DCN could be a potential target of miR-200c. Clinical features indicated that colon polyp history and overall survival were significantly related to the expression level of miR-200c. Three coexpression networks have been constructed, and genes involved in the networks are related to cell cycle, NOTCH, and mTOR signaling pathways. Conclusion. Our result provides a new insight into cancer related mRNA coexpression network in CRC research.


Subject(s)
Colorectal Neoplasms/metabolism , Decorin/biosynthesis , Gene Expression Regulation, Neoplastic , MicroRNAs/biosynthesis , Neoplasm Proteins/biosynthesis , RNA, Neoplasm/biosynthesis , Colorectal Neoplasms/genetics , Colorectal Neoplasms/mortality , Colorectal Neoplasms/pathology , Decorin/genetics , Female , Humans , Male , MicroRNAs/genetics , Neoplasm Proteins/genetics , RNA, Neoplasm/genetics
6.
Mol Med Rep ; 10(5): 2720-8, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25201740

ABSTRACT

Y­box binding protein­1 (YB­1) has been identified as an oncoprotein in various malignancies. The aim of this study was to investigate the biological role of YB­1 and its association with epithelial­to­mesenchymal transition (EMT) in colorectal cancer (CRC). The expression of YB­1 and three EMT­related proteins (E­cadherin, N­cadherin and vimentin) was analyzed in 80 CRC and matched normal tissue samples, by immunohistochemistry. The results indicated that the expression of YB­1 was higher in CRC tissue samples than that in matched normal controls and was significantly correlated with tumor differentiation, tumor invasion, lymph node metastasis and distant metastases. Furthermore, analysis showed that YB­1 expression was negatively correlated with E­cadherin and positively correlated with N­cadherin and vimentin expression. In vitro assays showed that knockdown of YB­1 inhibited the proliferation, apoptosis resistance, invasion and migration of the HT­29 CRC cell line. Of note, following knockdown of YB­1, E­cadherin expression was elevated whereas N­cadherin and vimentin expression was reduced. Taken together, these results suggest that YB­1 promotes the malignant progression of CRC in part through the induction of EMT, and YB­1 may therefore be a potential novel target for CRC treatment.


Subject(s)
Adenocarcinoma/metabolism , Colorectal Neoplasms/metabolism , Y-Box-Binding Protein 1/genetics , Adenocarcinoma/secondary , Apoptosis , Cell Movement , Cell Proliferation , Colorectal Neoplasms/pathology , Epithelial-Mesenchymal Transition , Female , Gene Knockdown Techniques , HT29 Cells , Humans , Lymphatic Metastasis , Male , Middle Aged , Neoplasm Invasiveness , Y-Box-Binding Protein 1/biosynthesis
7.
World J Gastroenterol ; 20(16): 4636-47, 2014 Apr 28.
Article in English | MEDLINE | ID: mdl-24782616

ABSTRACT

AIM: To investigate the protective effects of combinations of probiotic (Bifico) on interleukin (IL)-10-gene-deficient (IL-10 KO) mice and Caco-2 cell monolayers. METHODS: IL-10 KO mice were used to assess the benefits of Bifico in vivo. IL-10 KO and control mice received approximately 1.5 × 10(8) cfu/d of Bifico for 4 wk. Colons were then removed and analyzed for epithelial barrier function by Ussing Chamber, while an ELISA was used to evaluate proinflammatory cytokines. The colon epithelial cell line, Caco-2, was used to test the benefit of Bifico in vitro. Enteroinvasive Escherichia coli (EIEC) and the probiotic mixture Bifico, or single probiotic strains, were applied to cultured Caco-2 monolayers. Barrier function was determined by measuring transepithelial electrical resistance and tight junction protein expression. RESULTS: Treatment of IL-10 KO mice with Bifico partially restored body weight, colon length, and epithelial barrier integrity to wild-type levels. In addition, IL-10 KO mice receiving Bifico treatment had reduced mucosal secretion of tumor necrosis factor-α and interferon-γ, and attenuated colonic disease. Moreover, treatment of Caco-2 monolayers with Bifico or single-strain probiotics in vitro inhibited EIEC invasion and reduced the secretion of proinflammatory cytokines. CONCLUSION: Bifico reduced colon inflammation in IL-10 KO mice, and promoted and improved epithelial-barrier function, enhanced resistance to EIEC invasion, and decreased proinflammatory cytokine secretion.


Subject(s)
Colitis/therapy , Colon/metabolism , Colon/microbiology , Interleukin-10/deficiency , Intestinal Mucosa/metabolism , Intestinal Mucosa/microbiology , Probiotics , Animals , Body Weight , Caco-2 Cells , Colitis/immunology , Colitis/metabolism , Colitis/microbiology , Colitis/pathology , Colon/immunology , Colon/ultrastructure , Disease Models, Animal , Electric Impedance , Female , Humans , Inflammation Mediators/metabolism , Interferon-gamma/metabolism , Interleukin-10/genetics , Intestinal Mucosa/immunology , Intestinal Mucosa/ultrastructure , Mice, 129 Strain , Mice, Knockout , Permeability , Tight Junction Proteins/metabolism , Tight Junctions/metabolism , Tight Junctions/microbiology , Time Factors , Tumor Necrosis Factor-alpha/metabolism
8.
Mol Med Rep ; 9(6): 2205-12, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24718810

ABSTRACT

Complex communities of microorganisms play important roles in human health, and alterations in the intestinal microbiota may induce intestinal inflammation and numerous diseases. The purpose of this study was to identify the key genes and processes affected by depletion of the intestinal microbiota in a murine model. The Affymetrix microarray dataset GSE22648 was downloaded from the Gene Expression Omnibus database, and differentially expressed genes (DEGs) were identified using the limma package in R. A protein-protein interaction (PPI) network was constructed for the DEGs using the Cytoscape software, and the network was divided into several modules using the MCODE plugin. Furthermore, the modules were functionally annotated using the PiNGO plugin, and DEG-related pathways were retrieved and analyzed using the GenMAPP software. A total of 53 DEGs were identified, of which 26 were upregulated and 27 were downregulated. The PPI network of these DEGs comprised 3 modules. The most significant module-related DEGs were the cytochrome P450 (CYP) 4B1 isozyme gene (CYP4B1) in module 1, CYP4F14 in module 2 and the tachykinin precursor 1 gene (TAC1) in module 3. The majority of enriched pathways of module 1 and 2 were oxidation reduction pathways (metabolism of xenobiotics by CYPs) and lipid metabolism-related pathways, including linoleic acid and arachidonic acid metabolism. The neuropeptide signaling pathway was the most significantly enriched functional pathway of module 3. In conclusion, our findings strongly suggest that intestinal microbiota depletion affects cellular metabolism and oxidation reduction pathways. In addition, this is the first time, to the best of our knowledge, that the neuropeptide signaling pathway is reported to be affected by intestinal microbiota depletion in mice. The present study provides a list of candidate genes and processes related to the interaction of microbiota with the intestinal tract.


Subject(s)
Intestinal Mucosa/metabolism , Intestines/microbiology , Microbiota , Protein Interaction Mapping , Protein Interaction Maps , Animals , Cluster Analysis , Gene Expression Profiling , Gene Regulatory Networks , Mice , Molecular Sequence Annotation , Protein Binding , Signal Transduction
9.
Luminescence ; 29(6): 642-8, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24155180

ABSTRACT

Trivalent chromium is an essential element required for normal carbohydrate, lipid and protein metabolism in humans and animals. This article describes an efficient fluorescence resonance energy transfer (FRET) system between CePO4 :Tb(3+) nanocrystals as the donor and chromium(III) as the acceptor. CePO4 :Tb(3+) nanocrystals were synthesized in aqueous solution, and characterized by transmission electron microscopy. Under optimum conditions, a linear calibration graph was obtained (R(2) = 0.996). The linear range and detection limit of chromium(III) were 0.01-2.2 µM, and 9.1 nM, respectively. The proposed method had a wide linear range and proved to be very sensitive, rapid and simple. Moreover, the method was applied successfully to the determination of chromium(III) in synthetic samples and tap water.


Subject(s)
Cerium/chemistry , Chromium/analysis , Fluorescence Resonance Energy Transfer , Nanoparticles/chemistry , Phosphates/chemistry , Terbium/chemistry , Solutions , Water/chemistry
10.
Analyst ; 138(8): 2392-7, 2013 Apr 21.
Article in English | MEDLINE | ID: mdl-23463191

ABSTRACT

A new luminescence resonant energy transfer (LRET) system has been designed that utilizes near-infrared (NIR)-to-NIR upconversion lanthanide nanophosphors (UCNPs) as the donor, and Au nanorods (Au NRs) as the acceptor. The UCNPs were excited by a near-infrared (980 nm) wavelength and also emitted at a near-infrared wavelength (804 nm) using an inexpensive infrared continuous wave laser diode. The Au NRs showed a high absorption band around 806 nm, which provided large spectral overlap between the donor and the acceptor. Hg(2+) ions were added to an aqueous solution containing the UCNPs and Au NRs that were modified with a Hg(2+) aptamer. Then, a sandwich-type LRET system was developed for the detection of Hg(2+) ions that had high sensitivity and selectivity in the NIR region. The method was successfully applied to the sensing of Hg(2+) ions in water and human serum samples.


Subject(s)
Fluorides/chemistry , Mercury/analysis , Metal Nanoparticles/chemistry , Silver/chemistry , Spectroscopy, Near-Infrared/methods , Yttrium/chemistry , Energy Transfer , Ions/analysis , Nanotubes/chemistry , Thulium/chemistry , Ytterbium/analysis , Ytterbium/chemistry
11.
J Pathol ; 229(1): 12-24, 2013 Jan.
Article in English | MEDLINE | ID: mdl-22821729

ABSTRACT

Although recent studies indicate that DNA methylation contributes to the down-regulation of microRNAs (miRNAs) in colorectal cancer (CRC), this field remains largely unexplored. To identify methylation-silenced miRNAs and clarify their role in CRC, we performed a microarray analysis and screened for miRNAs that were induced in CRC cells by 5-aza-2'-deoxycytidine treatment or by the knockdown of DNA methyltransferases. The DNA methylation status of the candidate miRNA was analysed by bisulphite sequencing PCR and methylation-specific PCR. We found that miRNA-149 (miR-149) was epigenetically silenced in CRC and down-regulation of miR-149 was associated with hypermethylation of the neighbouring CpG island (CGI). Quantitative RT-PCR analysis demonstrated that the miR-149 level was markedly reduced in 51.6% of the CRC tissues compared with matched non-cancerous tissues. In addition, low expression of miR-149 was associated with a greater depth of invasion (p = 0.012), lower 5-year survival rate (p = 0.025), and was found to be an independent prognostic factor for overall survival (p = 0.016) in a multivariate analysis. Moreover, transfection of miR-149 inhibited cell growth and invasion of CRC cells in vitro. We also identified mRNA for Specificity Protein 1 (SP1, Sp1), a potential oncogenic protein, as a target of miR-149. Our data suggest that, as a methylation-sensitive miRNA, miR-149 may play an important role as a tumour suppressor in CRC, which has prognostic and therapeutic implications.


Subject(s)
Colorectal Neoplasms/metabolism , CpG Islands , DNA Methylation , MicroRNAs/metabolism , Sp1 Transcription Factor/metabolism , Azacitidine/analogs & derivatives , Azacitidine/pharmacology , Base Sequence , Cell Proliferation , Chi-Square Distribution , Colorectal Neoplasms/genetics , Colorectal Neoplasms/mortality , Colorectal Neoplasms/pathology , CpG Islands/drug effects , DNA Methylation/drug effects , DNA Modification Methylases/antagonists & inhibitors , DNA Modification Methylases/genetics , DNA Modification Methylases/metabolism , Decitabine , Down-Regulation , Enzyme Inhibitors/pharmacology , Female , Gene Expression Profiling/methods , Gene Knockdown Techniques , Gene Silencing , HCT116 Cells , HT29 Cells , Humans , Kaplan-Meier Estimate , Male , Middle Aged , Molecular Sequence Data , Multivariate Analysis , Neoplasm Invasiveness , Oligonucleotide Array Sequence Analysis , Polymerase Chain Reaction , Prognosis , Proportional Hazards Models , Risk Assessment , Risk Factors , Signal Transduction , Sp1 Transcription Factor/genetics , Time Factors , Transfection
12.
World J Gastroenterol ; 18(30): 3977-91, 2012 Aug 14.
Article in English | MEDLINE | ID: mdl-22912548

ABSTRACT

AIM: To investigate the mechanisms of Lactobacillus plantarum (L. plantarum) action on gut barrier in preoperative and postoperative experimental obstructive jaundice in rats. METHODS: Forty rats were randomly divided into groups of sham-operation, bile duct ligation (BDL), BDL + L. plantarum, BDL + internal biliary drainage (IBD), and BDL + IBD + L. plantarum. Ten days after L. plantarum administration, blood and ileal samples were collected from the rats for morphological examination, and intestinal barrier function, liver function, intestinal oxidative stress and protein kinase C (PKC) activity measurement. The distribution and expression of the PKC and tight junction (TJ) proteins, such as occludin, zonula occludens-1, claudin-1, claudin-4, junction adhesion molecule-A and F-actin, were examined by confocal laser scanning microscopy, immunohistochemistry, Western blotting, real-time fluorescent quantitative polymerase chain reaction assay. RESULTS: L. plantarum administration substantially restored gut barrier, decreased enterocyte apoptosis, improved intestinal oxidative stress, promoted the activity and expression of protein kinase (BDL vs BDL + L. plantarum, 0.295 ± 0.007 vs 0.349 ± 0.003, P < 0.05; BDL + IBD vs BDL + IBD + L. plantarum, 0.407 ± 0.046 vs 0.465 ± 0.135, P < 0.05), and particularly enhanced the expression and phosphorylation of TJ proteins in the experimental obstructive jaundice (BDL vs BDL + L. plantarum, 0.266 ± 0.118 vs 0.326 ± 0.009, P < 0.05). The protective effect of L. plantarum was more prominent after internal biliary drainage ( BDL + IBD vs BDL + IBD + L. plantarum, 0.415 ± 0.105 vs 0.494 ± 0.145, P < 0.05). CONCLUSION: L. plantarum can decrease intestinal epithelial cell apoptosis, reduce oxidative stress, and prevent TJ disruption in biliary obstruction by activating the PKC pathway.


Subject(s)
Intestinal Mucosa/enzymology , Lactobacillus plantarum , Probiotics/therapeutic use , Protein Kinase C/metabolism , Tight Junction Proteins/metabolism , Tight Junctions/metabolism , Alanine Transaminase/blood , Amine Oxidase (Copper-Containing)/blood , Animals , Apoptosis , Bilirubin/blood , Endotoxins/blood , Enterocytes/microbiology , Enterocytes/physiology , Glutathione/blood , Ileum/pathology , Intestinal Mucosa/microbiology , Intestinal Mucosa/pathology , Jaundice, Obstructive/blood , Jaundice, Obstructive/microbiology , Jaundice, Obstructive/surgery , Lactic Acid/blood , Male , Malondialdehyde/metabolism , Oxidative Stress , Rats , Superoxide Dismutase/metabolism , Tight Junctions/ultrastructure
13.
Article in English | MEDLINE | ID: mdl-22387679

ABSTRACT

A novel flow injection nanocrystals (NCs) chemiluminescence (CL) analysis method has been established for the determination of estradiol, estriol and estrone based on the enhancement of CdTe NCs-KMnO(4) CL reaction catalyzed by sodium hexametaphosphate. Glutathione (GSH)-capped CdTe nanocrystals were synthesized in aqueous medium, and the CdTe NCs emitted at around 555 nm was selected as the light emitter in CdTe NCs-KMnO(4) chemiluminescence (CL) system. It has been found that sodium hexametaphosphate (SHMP) enhanced the CL of the CdTe NCs-KMnO(4) system and estrogens increased these CL signals again in near neutral solution. UV-visible spectra, photoluminescence (PL) spectra, transmission electron microscopy (TEM) and CL spectra were used to characterize CdTe nanoparticles and investigate the mechanism of the CL reaction. On the basis of the enhancement, a novel flow-injection CL method has been established for the determination of estrogens. Under the optimum experimental conditions, three linear relationships were obtained. The method described is simple, sensitive, and has been successfully utilized for the determination of estrogens in tap water samples.


Subject(s)
Cadmium Compounds/chemistry , Drinking Water/analysis , Estrogens/analysis , Luminescent Measurements/methods , Nanoparticles/chemistry , Phosphates/chemistry , Tellurium/chemistry , Water Pollutants, Chemical/analysis , Catalysis , Luminescent Measurements/economics , Potassium Permanganate/chemistry , Sensitivity and Specificity
14.
Mol Biol Rep ; 39(1): 269-75, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21625865

ABSTRACT

MicroRNAs (miRNAs) are small non-coding RNA molecules that function as negative regulators of gene expression. Common genetic variants (single nucleotide polymorphisms, SNPs) in miRNA genes may alter their expression or maturation resulting in varied functional consequences. Until now, several studies had evaluated the association between the polymorphisms in the hsa-miR-196a2 rs11614913 and cancer risk in diverse populations and in multiple types of cancer, with contradictory outcomes. Therefore, here we performed a meta-analysis to address the association between this polymorphism and cancer risk. A total of nine studies involving 6,540 cases and 7,562 controls were retrieved based on PubMed. Our analysis demonstrated that hsa-miR-196a2 rs11614913 CC genotype significantly increased the cancer risk in homozygote comparison model compared to TT genotype (OR=1.18; 95% CI, 1.01-1.68). Moreover, significant association of this polymorphism with breast cancer was found based on homozygote comparison model (OR=1.30; 95% CI, 1.01-1.26) and dominant model (OR=1.11; 95% CI, 1.01-1.23). In addition, hsa-miR-196a2 rs11614913 CC genotype was significantly associated with cancer risk in Chinese and Indian (OR=1.21; 95% CI, 1.05-1.40), but not in Caucasians (OR=1.03; 95% CI, 0.89-1.19). Taken together, our results indicate that the polymorphism of hsa-miR-196a2 rs11614913 is associated with cancer susceptibility, especially with breast cancer and in Chinese and Indian populations.


Subject(s)
Breast Neoplasms/ethnology , Breast Neoplasms/genetics , Genetic Predisposition to Disease/ethnology , Genetic Predisposition to Disease/genetics , MicroRNAs/genetics , Asian People/genetics , Female , Genetic Association Studies , Homozygote , Humans , Polymorphism, Single Nucleotide/genetics , White People/genetics
15.
Mol Med ; 17(11-12): 1323-37, 2011.
Article in English | MEDLINE | ID: mdl-21915437

ABSTRACT

Various biomarkers currently used for the diagnosis of intestinal mucosal injury (IMI) in patients with acute intestinal obstruction have low sensitivity and specificity. In the present study, IMI, as indicated by the impaired expression of tight junction proteins, including zonula occludens-1, occludin and claudin-1, and inflammation were determined in colonic tissues of patients with 45 strangulated intestinal obstruction (STR-IO) and the adjacent "normal" colonic tissues of 35 patients with colon cancers by quantitative real-time polymerase chain reaction (QRT-PCR), Western blotting, immunohistochemistry and histological examination, respectively. Then, two-dimensional fluorescent difference gel electrophoresis coupled with linear trap quadrupole mass spectrometry was used to screen for potential biomarkers of IMI in the serum samples of 10 STR-IO, 10 simple intestinal obstruction (SIM-IO) and 10 normal healthy controls. A total of 35 protein spots were differentially expressed among the serum samples, and six of the proteins were identified as potential biomarkers. Among the six proteins, histidine decarboxylase (HDC) and ceruloplasmin (CP) were elevated significantly in patients with STR-IO, compared with patients with SIM-IO and healthy controls. Thus, HDC and CP were further validated by QRT-PCR, Western blotting, immunohistochemistry and enzyme-linked immunosorbent assay, respectively, in colonic tissues, serum and urine samples. Finally, the receiver operating characteristic curves were used to show the area under the curves of HDC, CP and several established biomarkers, followed by the determination of the appropriate cutoff values and their sensitivities and specificities. It was shown that for serum and urine, HDC levels achieved sensitivities and specificities compatible to or even greater than those of established biomarkers for the diagnosis of IMI in patients with acute intestinal obstruction, although further validation in a larger cohort is required.


Subject(s)
Histidine Decarboxylase/metabolism , Intestinal Mucosa/enzymology , Intestinal Mucosa/injuries , Intestinal Obstruction/enzymology , Intestinal Obstruction/pathology , Acute Disease , Adult , Aged , Biomarkers/metabolism , Blotting, Western , Case-Control Studies , Claudin-1 , Female , Fluorescent Dyes/metabolism , Humans , Immunohistochemistry , Intestinal Mucosa/pathology , Intestinal Obstruction/genetics , Male , Membrane Proteins/genetics , Membrane Proteins/metabolism , Middle Aged , Occludin , Phosphoproteins/genetics , Phosphoproteins/metabolism , Proteomics , Real-Time Polymerase Chain Reaction , Reproducibility of Results , Zonula Occludens-1 Protein
16.
J Gastroenterol Hepatol ; 26(2): 405-11, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21261733

ABSTRACT

BACKGROUND AND AIM: Probiotics are used in the therapy of inflammatory bowel disease. This study aimed to determine the effects of probiotic Lactobacillus plantarum LP-Onlly (LP) on gut flora and colitis in interleukin-10 knockout (IL-10(-/-) ) mice, a model of spontaneous colitis. METHODS: IL-10(-/-) and wild-type mice were used at 8 weeks of age and LP by gavage was administered at a dose of 10(9) cells/day per mice for 4 weeks. Mice were maintained for another one week without LP treatment. The colonic tissues were collected for histological and ultrastructural analysis at death after 4 weeks treatment of LP, and the feces were collected at 1-week intervals throughout the experiment for the analysis of gut flora and LP using selective culture-based techniques. RESULTS: Compared with control mice, IL-10(-/-) mice developed a severe intestinal inflammation and tissue damage, and had an abnormal composition of gut microflora. LP administration attenuated colitis with the decreased inflammatory scoring and histological injury in the colon of IL-10(-/-) mice. In addition, LP administration increased the numbers of beneficial total bifidobacteria and lactobacilli, and decreased the numbers of potential pathogenic enterococci and Clostridium perfringens, although the decrease of coliforms was not significant after LP treatment in IL-10(-/-) mice. CONCLUSIONS: Oral administration of LP was effective in the treatment of colitis, with the direct modification of gut microflora in IL-10(-/-) mice. This probiotic strain could be used as a potential adjuvant in the therapy of inflammatory bowel disease, although further studies are required in human.


Subject(s)
Colitis/prevention & control , Colon/microbiology , Interleukin-10/deficiency , Lactobacillus plantarum/growth & development , Probiotics/administration & dosage , Administration, Oral , Animals , Bifidobacterium/growth & development , Clostridium perfringens/growth & development , Colitis/genetics , Colitis/immunology , Colitis/microbiology , Colitis/pathology , Colon/immunology , Colon/ultrastructure , Disease Models, Animal , Enterococcus/growth & development , Feces/microbiology , Female , Interleukin-10/genetics , Mice , Mice, 129 Strain , Mice, Knockout , Severity of Illness Index , Time Factors
17.
J Cell Mol Med ; 15(9): 1941-54, 2011 Sep.
Article in English | MEDLINE | ID: mdl-20831567

ABSTRACT

The increase in proliferation and the lack of differentiation of cancer cells resemble what occur in the embryonic stem cells during physiological process of embryogenesis. There are also striking similarities in the behaviour between the invasive placental cells and invasive cancer cells. In the present study, microarrays were used to analyse the global expression of microRNAs in a human embryonic stem cell line (i.e. HUES-17) and four colorectal cancer (CRC) cell lines (i.e. LoVo, SW480, HT29 and Caco-2) with different metastatic potentialities. Only the expression of miR-26b was significant decreased in HUES-17s and LoVo cells, compared with other three cell lines (P < 0.01). The quantitative real-time PCR analysis confirmed the results of the microarray analysis. Overexpression of miR-26b expression by miR-26 mimics transfection and led to the significant suppression of the cell growth and the induction of apoptosis in LoVo cells in vitro, and the inhibition of tumour growth in vivo. Moreover, the potential targets of miR-26b was predicted by using bioinformatics, and then the predicted target genes were further validated by comparing gene expression profiles between LoVo and NCM460 cell lines. Four genes (TAF12, PTP4A1, CHFR and ALS2CR2) with intersection were found to be the targets of miR-26b. MetaCore network analysis further showed that the regulatory pathways of miR-26b were significantly associated with the invasiveness and metastasis of CRC cells. These data suggest that miR-26b might serve as a novel prognostic factor and a potential therapeutic target for CRC.


Subject(s)
Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , Embryonic Stem Cells/metabolism , MicroRNAs/metabolism , Animals , Apoptosis/genetics , Cell Line , Cell Proliferation , Cell Transformation, Neoplastic/genetics , Cell Transformation, Neoplastic/pathology , Disease Progression , Embryonic Stem Cells/cytology , Female , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Gene Regulatory Networks , Humans , Mice , Mice, Nude , MicroRNAs/genetics , Microfluidics , Neoplasm Invasiveness , Neoplasm Metastasis , RNA, Neoplasm/genetics , RNA, Neoplasm/metabolism , Reproducibility of Results , Reverse Transcriptase Polymerase Chain Reaction , Xenograft Model Antitumor Assays
18.
Talanta ; 83(1): 139-44, 2010 Nov 15.
Article in English | MEDLINE | ID: mdl-21035654

ABSTRACT

With the biomolecule glutathione (GSH) as a capping ligand, Eu(3+)-doped cadmium sulfide composite nanoparticles were successfully synthesized through a straightforward one-pot process. An efficient fluorescence energy transfer system with CdS nanoparticles as energy donor and Eu(3+) ions as energy accepter was developed. As a result of specific interaction, the fluorescence intensity of Eu(3+)-doped CdS nanoparticles is obviously reduced in the presence of Hg(2+). Moreover, the long fluorescent lifetime and large Stoke's shift of europium complex permit sensitive fluorescence detection. Under the optimal conditions, the fluorescence intensity of Eu(3+) at 614 nm decreased linearly with the concentration of Hg(2+) ranging from 10 nmol L(-1) to 1500 nmol L(-1), the limit of detection for Hg(2+) was 0.25 nmol L(-1). In addition to high stability and reproducibility, the composite nanoparticles show a unique selectivity towards Hg(2+) ion with respect to common coexisting cations. Moreover, the developed method was applied to the detection of trace Hg(2+) in aqueous solutions. The probable mechanism of reaction between Eu(3+)-doped CdS composite nanoparticles and Hg(2+) was also discussed.


Subject(s)
Cadmium Compounds/chemistry , Cations, Divalent/analysis , Europium/chemistry , Fluorescence Resonance Energy Transfer/methods , Mercury/analysis , Nanoparticles/chemistry , Sulfides/chemistry , Glutathione/chemistry , Sensitivity and Specificity
19.
J Nutr ; 140(12): 2201-6, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20980636

ABSTRACT

Although probiotic consumption has generally been shown to have many beneficial effects for the prevention and treatment of inflammatory bowel disease, the effects of Lactobacillus plantarum (LP) on intestinal nutrient absorption, particularly oligopeptide transporter 1 (PepT1)-mediated absorption of dietary protein under inflammatory conditions, has not yet been characterized. In this study, we first investigated the effects of LP consumption on plasma amino acid concentrations and PepT1-mediated absorption of cephalexin in the small intestine of wild-type (WT) mice and interleukin-10 knockout (IL-10(-/-)) mice, a model of spontaneous colitis. We then analyzed expression and distribution of PepT1 and protein kinase C (PKC) activity in the jejunum of these mice. LP consumption (10(9) colony-forming units/0.5 mL) delivered by gavage once per day for 4 wk increased the total plasma amino acid concentration and the concentration of plasma cephalexin through enhancement of PepT1-mediated uptake in LP treated IL-10(-/-) mice compared with IL-10(-/-) mice. However, Western blotting and quantitative PCR analysis revealed no significant differences in PepT1 protein and mRNA expression between LP-treated and untreated mice. Additionally, immunofluorescence analysis showed that PepT1 did not appear to be mislocalized in IL-10(-/-) mice. Interestingly, IL-10(-/-) mice had significantly lower PKC activity and expression of phosphorylated PKC compared with WT mice, and these decreases could be prevented by LP treatment. These data suggest that consumption of LP enhances PepT1-mediated amino acid absorption, likely through alterations in PKC activity, as opposed to changes in expression or distribution of PepT1 in the small intestine of IL-10(-/-) mice.


Subject(s)
Amino Acids/metabolism , Colitis/metabolism , Lactobacillus plantarum/metabolism , Protein Kinase C/metabolism , Symporters/physiology , Animals , Colitis/enzymology , Colitis/microbiology , Interleukin-10/genetics , Interleukin-10/physiology , Jejunum/enzymology , Jejunum/metabolism , Mice , Mice, Knockout , Peptide Transporter 1
20.
Am J Physiol Gastrointest Liver Physiol ; 299(6): G1287-97, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20884889

ABSTRACT

Probiotics are efficacious in the treatment of inflammatory bowel disease. However, the precise mechanisms remain unknown. To determine whether probiotic Lactobacillus plantarum (LP) ameliorates colonic epithelial barrier dysfunction present in interleukin-10 knockout (IL-10⁻(/)⁻) mice, IL-10⁻(/)⁻ and wild-type mice received LP or the vehicle for 4 wk. Colitis was assessed by histological scores and clinical manifestation, and gut paracellular permeability was measured by Ussing chamber. Oligopeptide transporter 1 (PepT1)-mediated transepithelial transport was evaluated by measuring the plasma cephalexin concentration. The expression and distribution of apical junctional complex (AJC) proteins and PepT1 were determined by Western blotting and immunofluorescence and their mRNA by reverse transcriptase-PCR. Spontaneous colitis was observed in all IL-10⁻(/)⁻ mice in which paracellular permeability was increased, in conjunction with decreased expression and redistribution of zonula occludens-1, occludin, claudin-1, and ß-catenin. PepT1 expression was increased, accompanied with an enhanced cephalexin transport. Colonic epithelial barrier dysfunction was further confirmed by increased bacterial translocation and proinflammatory cytokine production. Treatment with LP decreased colonic paracellular permeability with restoration of expression and distribution of AJC proteins and partially prevented PepT1 expression and cephalexin transport in IL-10⁻(/)⁻ mice. Moreover, treatment with LP also prevented bacterial translocation and proinflammatory cytokine production in IL-10⁻(/)⁻ mice. Results from this study indicated that treatment with LP may ameliorate colonic epithelial barrier dysfunction in IL-10⁻(/)⁻ mice, by modulating the AJC- and PepT1-mediated transepithelial transport.


Subject(s)
Colon/physiology , Interleukin-10/genetics , Interleukin-10/metabolism , Intestinal Mucosa/physiopathology , Symporters/genetics , Symporters/metabolism , Animals , Biological Transport , Colitis/prevention & control , Gene Expression Regulation/physiology , Inflammation/metabolism , Lactobacillus plantarum , Mice , Mice, Knockout , Peptide Transporter 1
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