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1.
Exp Hematol Oncol ; 12(1): 92, 2023 Oct 16.
Article in English | MEDLINE | ID: mdl-37845755

ABSTRACT

Targeted therapy with Bruton tyrosine kinase (BTK) inhibitors have revolutionized the treatment of patients with various B-cell malignancies. BTK inhibitors such as ibrutinib, zanubrutinib, orelabrutinib, and acalabrutinib have shown good clinical efficacy and better safety profiles than those of traditional chemotherapy and chemoimmunotherapy regimens. Multiple studies on new BTK inhibitors are ongoing, which may provide more therapeutic options for the treatment of B-cell malignancies. Considering the unmet need of evidence on BTK inhibitors in all clinical settings and to standardize the use of BTK inhibitors available in mainland China, Taiwan, Hong Kong, and Macau regions, this consensus has been formulated for the treatment of various B-cell malignancies based on the clinical practice and available evidences on the use of BTK inhibitors. The recommendations of this consensus will provide guidance to physicians and clinical researchers on the effective treatment of B-cell malignancies with BTK inhibitors.

2.
PLoS Biol ; 21(4): e3002095, 2023 Apr.
Article in English | MEDLINE | ID: mdl-37023391

ABSTRACT

[This corrects the article DOI: 10.1371/journal.pbio.3000782.].

3.
Biotechnol Lett ; 45(1): 13-31, 2023 Jan.
Article in English | MEDLINE | ID: mdl-36357714

ABSTRACT

Most of the currently available disease resistance (R) genes have NBS (nucleotide-binding site) and LRR (leucine-rich-repeat) domain which belongs to the NBS-LRR gene family. The whole genome sequencing of Broussonetia papyrifera provides an important bioinformatics database for the study of the NBS-LRR gene family. In this study, 328 NBS-LRR family genes were identified and classified in B. papyrifera according to different classification schemes, where there are 92 N types, 47 CN type, 54 CNL type, 29 NL types, 55 TN type, and 51 TNL type. Subsequently, we conducted bioinformatics analysis of the NBS-LRR gene family. Classification, motif analysis of protein sequences, and phylogenetic tree studies of the NBS-LRR genes in B. papyrifera provide important basis for the functional study of NBS-LRR family genes. Additionally, we performed structural analysis of the chromosomal location, physicochemical properties, and sequences identified by genetic characterization. In addition, through the analysis of GO enrichment, it was found that NBS-LRR genes were involved in defense responses and were significantly enriched in biological stimulation, immune response, and abiotic stress. In addition, we found that Bp06g0955 was the most sensitive to low temperature and encoded the RPM1 protein by analyzing the low temperature transcriptome data of B. papyrifera. Quantitative results of gene expression after 48 h of Fusarium infection showed that Bp01g3293 increased 14 times after infection, which encodes RPM1 protein. The potential of NBS-LRR gene responsive to biotic and abiotic stresses can be exploited to improve the resistance of B. papyrifera.


Subject(s)
Broussonetia , Phylogeny , Proteins/genetics , Binding Sites/genetics , Computational Biology
4.
Int J Mol Sci ; 23(3)2022 Jan 31.
Article in English | MEDLINE | ID: mdl-35163600

ABSTRACT

YABs play an important role in the leaf development of the paper mulberry (Broussonetia papyrifera) and of the heterophylly. Thus, we investigated the function of BpYABs. Gene cloning, phylogenetic analysis, motif identification, subcellular localization, transactivation activity assay, qRT-PCR, in situ hybridization, and ectopic expression were used in our study. Six BpYABs were isolated, and four of them had transcriptional activity. BpYAB1, BpYAB3, BpYAB4, and BpYAB5 were localized to the nucleus. BpYAB1 was only expressed in the flower, while BpYAB6 was not expressed in any detected tissues; the four remaining BpYABs were expressed in the bud, leaf and flower, and their expression level decreased with leaf development. Further in situ hybridization showed that BpYAB3 and BpYAB5 were expressed in the vascular tissues and lamina, but neither showed the adaxial-abaxial polarity distribution pattern in the mature leaf lamina. Ectopic expression of BpYAB2, BpYAB3, BpYAB4 and BpYAB5 induced increased expression of AtWOX1 and caused the leaf of Arabidopsis to become smaller and curl downwards. Ectopic expression also led to shorter siliques and smaller seeds, but not for BpYAB5. These results suggest that BpYABs have functional divergency and redundancy in regulating leaf and silique development.


Subject(s)
Arabidopsis , Broussonetia/genetics , Plant Leaves , Plant Proteins , Plants, Genetically Modified , Transcription Factors , Arabidopsis/genetics , Arabidopsis/metabolism , Broussonetia/metabolism , Genome-Wide Association Study , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Proteins/biosynthesis , Plant Proteins/genetics , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Transcription Factors/biosynthesis , Transcription Factors/genetics
5.
Molecules ; 26(11)2021 Jun 06.
Article in English | MEDLINE | ID: mdl-34204142

ABSTRACT

Broussonetia papyrifera is a multifunctional deciduous tree that is both a food and a source of traditional Chinese medicine for both humans and animals. Further analysis of the UGT gene family is of great significance to the utilization of B. papyrifera. The substrates of plant UGT genes include highly diverse and complex chemicals, such as flavonoids and terpenes. In order to deepen our understanding of this family, a comprehensive analysis was performed. Phylogenetic analysis showed that 155 BpUGTs were divided into 15 subgroups. A conserved motif analysis showed that BpUGT proteins in the same subgroups possessed similar motif structures. Tandem duplication was the primary driving force for the expansion of the BpUGT gene family. The global promoter analysis indicated that they were associated with complex hormone regulatory networks and the stress response, as well as the synthesis of secondary metabolites. The expression pattern analysis showed that the expression level of BpUGTs in leaves and roots was higher than that in fruits and stems. Next, we determined the composition and content of flavonoids, the main products of the BpUGT reaction. A total of 19 compounds were isolated and analyzed by UPLC-ESI-MS/MS in 3 species of Broussonetia including B. kazinoki, B. papyrifera, and B. kazinoki × B. papyrifera, and the number of compounds was different in these 3 species. The total flavonoid content and antioxidant capacities of the three species were analyzed respectively. All assays exhibited the same trend: the hybrid paper mulberry showed a higher total flavonoid content, a higher total phenol content and higher antioxidant activity than the other two species. Overall, our study provides valuable information for understanding the function of BpUGTs in the biosynthesis of flavonoids.


Subject(s)
Broussonetia/chemistry , Flavonoids/isolation & purification , Glycosyltransferases/genetics , Broussonetia/genetics , Evolution, Molecular , Gene Expression Regulation, Plant , Glycosyltransferases/classification , Glycosyltransferases/metabolism , Multigene Family , Phylogeny , Plant Leaves/chemistry , Plant Leaves/genetics , Plant Proteins/classification , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Roots/chemistry , Plant Roots/genetics , Tissue Distribution
6.
Biotechnol Lett ; 43(5): 1089-1102, 2021 May.
Article in English | MEDLINE | ID: mdl-33751277

ABSTRACT

OBJECTIVES: To study the possible roles of type-2C protein phosphatases (PP2Cs) which have been confirmed to play roles in the response to diverse abiotic stresses in paper mulberry, we launched a series of genomic and functional studies of BpPP2Cs. RESULTS: Sixty-three PP2C proteins in paper mulberry (Broussonetia papyrifera) were classified into 13 clades. Four BpPP2Cs with kinase domains were verified to be highly conserved in organisms ranging from algae to dicots. Seven pairs of BpPP2C genes were found to be expanding, and 18 BpPP2C genes had orthologues in Arabidopsis. BpPP2Cs showed broad expression in different tissues; the expression levels of 18 BpPP2Cs were changed and the phosphorylation levels of seven BpPP2C proteins increased at low temperature. Cold-response elements were found in the promoter region of 31 BpPP2Cs. Finally, Bp01g0320 was found to act as a hub protein and Bp01g0512 and Bp09g1278 played key roles in the ABA-signaling pathway and MAPK cascades, respectively. CONCLUSION: These results suggest that the PP2C gene family of paper mulberry is evolutionarily conserved and participates the regulation of the response to cold stress, which will play a vital role in further research on phosphatases in paper mulberry.


Subject(s)
Broussonetia/physiology , Cold-Shock Response , Phosphoprotein Phosphatases/metabolism , Plant Proteins/metabolism , Broussonetia/classification , Broussonetia/genetics , Broussonetia/metabolism , Chromosome Mapping , Cold-Shock Response/genetics , Gene Duplication , Gene Expression , Gene Expression Regulation, Plant , Genes, Plant , Genome, Plant/genetics , Multigene Family , Phosphoprotein Phosphatases/genetics , Phosphorylation , Phylogeny , Plant Proteins/genetics , Promoter Regions, Genetic , Protein Domains , Protein Interaction Maps , Signal Transduction , Synteny
7.
Int J Mol Sci ; 23(1)2021 Dec 23.
Article in English | MEDLINE | ID: mdl-35008552

ABSTRACT

Plant growth and development relies on the conversion of light energy into chemical energy, which takes place in the leaves. Chlorophyll mutant variations are important for studying certain physiological processes, including chlorophyll metabolism, chloroplast biogenesis, and photosynthesis. To uncover the mechanisms of the golden-yellow phenotype of the hybrid paper mulberry plant, this study used physiological, cytological, and iTRAQ-based proteomic analyses to compare the green and golden-yellow leaves of hybrid paper mulberry. Physiological results showed that the mutants of hybrid paper mulberry showed golden-yellow leaves, reduced chlorophyll, and carotenoid content, and increased flavonoid content compared with wild-type plants. Cytological observations revealed defective chloroplasts in the mesophyll cells of the mutants. Results demonstrated that 4766 proteins were identified from the hybrid paper mulberry leaves, of which 168 proteins displayed differential accumulations between the green and mutant leaves. The differentially accumulated proteins were primarily involved in chlorophyll synthesis, carotenoid metabolism, and photosynthesis. In addition, differentially accumulated proteins are associated with ribosome pathways and could enable plants to adapt to environmental conditions by regulating the proteome to reduce the impact of chlorophyll reduction on growth and survival. Altogether, this study provides a better understanding of the formation mechanism of the golden-yellow leaf phenotype by combining proteomic approaches.


Subject(s)
Morus/metabolism , Plant Leaves/metabolism , Plant Proteins/metabolism , Proteome/metabolism , Carotenoids/metabolism , Chlorophyll/metabolism , Chloroplasts/metabolism , Evaluation Studies as Topic , Gene Expression Regulation, Plant/physiology , Phenotype , Photosynthesis/physiology , Proteomics/methods
8.
Plants (Basel) ; 9(10)2020 Oct 01.
Article in English | MEDLINE | ID: mdl-33019650

ABSTRACT

The plant-specific TCP family proteins play an important role in the processes of plant growth and development. Broussonetia papyrifera is a versatile perennial deciduous tree, and its genome data have been published. However, no comprehensive analysis of the TCP gene family in B. papyrifera has been undertaken. In this study, 20 BpTCP genes (BpTCPs) were identified in the B. papyrifera genome. Phylogenetic analysis divided BpTCPs into three subclades, the PCF subclade, the CIN subclade and the CYC/TB1 subclade. Gene structure analysis displayed that all BpTCPs except BpTCP19 contained one coding region. Conserved motif analysis showed that BpTCP proteins in the same subclade possessed similar motif structures. Segmental duplication was the primary driving force for the expansion of BpTCPs. Expression patterns showed that BpTCPs may play diverse biological functions in organ or tissue development. Transcriptional activation activity analysis of BpTCP8, BpTCP14 and BpTCP19 showed that they possessed transcriptional activation ability. The ectopic expression analysis in Arabidopsis wild-type and AtBRC1 ortholog mutant showed that BpTCP8, BpTCP14 and BpTCP19 could prevent rosette branch outgrowth. Collectively, our study not only established the first genome-wide analysis of the B. papyrifera TCP gene family, but also provided valuable information for understanding the function of BpTCPs in shoot branching.

9.
PLoS Biol ; 18(7): e3000782, 2020 07.
Article in English | MEDLINE | ID: mdl-32692742

ABSTRACT

Tight regulation of gene transcription and mRNA splicing is essential for plant growth and development. Here we demonstrate that a plant-specific protein, EMBRYO DEFECTIVE 1579 (EMB1579), controls multiple growth and developmental processes in Arabidopsis. We demonstrate that EMB1579 forms liquid-like condensates both in vitro and in vivo, and the formation of normal-sized EMB1579 condensates is crucial for its cellular functions. We found that some chromosomal and RNA-related proteins interact with EMB1579 compartments, and loss of function of EMB1579 affects global gene transcription and mRNA splicing. Using floral transition as a physiological process, we demonstrate that EMB1579 is involved in FLOWERING LOCUS C (FLC)-mediated repression of flowering. Interestingly, we found that EMB1579 physically interacts with a homologue of Drosophila nucleosome remodeling factor 55-kDa (p55) called MULTIPLE SUPPRESSOR OF IRA 4 (MSI4), which has been implicated in repressing the expression of FLC by forming a complex with DNA Damage Binding Protein 1 (DDB1) and Cullin 4 (CUL4). This complex, named CUL4-DDB1MSI4, physically associates with a CURLY LEAF (CLF)-containing Polycomb Repressive Complex 2 (CLF-PRC2). We further demonstrate that EMB1579 interacts with CUL4 and DDB1, and EMB1579 condensates can recruit and condense MSI4 and DDB1. Furthermore, emb1579 phenocopies msi4 in terms of the level of H3K27 trimethylation on FLC. This allows us to propose that EMB1579 condensates recruit and condense CUL4-DDB1MSI4 complex, which facilitates the interaction of CUL4-DDB1MSI4 with CLF-PRC2 and promotes the role of CLF-PRC2 in establishing and/or maintaining the level of H3K27 trimethylation on FLC. Thus, we report a new mechanism for regulating plant gene transcription, mRNA splicing, and growth and development.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/growth & development , Arabidopsis/genetics , Calcium-Binding Proteins/metabolism , Plant Development/genetics , RNA Splicing/genetics , Transcription, Genetic , Arabidopsis Proteins/genetics , Calcium-Binding Proteins/genetics , Cell Nucleus/metabolism , Flowers/physiology , Histones/metabolism , Loss of Function Mutation , Lysine/metabolism , Methylation , Nuclear Proteins/metabolism , Phenotype , Plant Roots/cytology , Protein Binding , RNA, Messenger/genetics , RNA, Messenger/metabolism , Repetitive Sequences, Amino Acid
10.
Int J Mol Sci ; 20(11)2019 Jun 05.
Article in English | MEDLINE | ID: mdl-31195605

ABSTRACT

The actin cytoskeleton is involved in regulating stomatal movement, which forms distinct actin arrays within guard cells of stomata with different apertures. How those actin arrays are formed and maintained remains largely unexplored. Elucidation of the dynamic behavior of differently oriented actin filaments in guard cells will enhance our understanding in this regard. Here, we initially developed a program called 'guard cell microfilament analyzer' (GCMA) that enables the selection of individual actin filaments and analysis of their orientations semiautomatically in guard cells. We next traced the dynamics of individual actin filaments and performed careful quantification in open and closed stomata. We found that de novo nucleation of actin filaments occurs at both dorsal and ventral sides of guard cells from open and closed stomata. Interestingly, most of the nucleated actin filaments elongate radially and longitudinally in open and closed stomata, respectively. Strikingly, radial filaments tend to form bundles whereas longitudinal filaments tend to be removed by severing and depolymerization in open stomata. By contrast, longitudinal filaments tend to form bundles that are severed less frequently in closed stomata. These observations provide insights into the formation and maintenance of distinct actin arrays in guard cells in stomata of different apertures.


Subject(s)
Actin Cytoskeleton/metabolism , Arabidopsis/cytology , Arabidopsis/metabolism , Plant Stomata/cytology , Plant Stomata/metabolism , Actins/metabolism , Circadian Rhythm/physiology , Polymerization
11.
Mol Plant ; 12(5): 661-677, 2019 05 06.
Article in English | MEDLINE | ID: mdl-30822525

ABSTRACT

Paper mulberry (Broussonetia papyrifera) is a well-known woody tree historically used for Cai Lun papermaking, one of the four great inventions of ancient China. More recently, Paper mulberry has also been used as forage to address the shortage of feedstuff because of its digestible crude fiber and high protein contents. In this study, we obtained a chromosome-scale genome assembly for Paper mulberry using integrated approaches, including Illumina and PacBio sequencing platform as well as Hi-C, optical, and genetic maps. The assembled Paper mulberry genome consists of 386.83 Mb, which is close to the estimated size, and 99.25% (383.93 Mb) of the assembly was assigned to 13 pseudochromosomes. Comparative genomic analysis revealed the expansion and contraction in the flavonoid and lignin biosynthetic gene families, respectively, accounting for the enhanced flavonoid and decreased lignin biosynthesis in Paper mulberry. Moreover, the increased ratio of syringyl-lignin to guaiacyl-lignin in Paper mulberry underscores its suitability for use in medicine, forage, papermaking, and barkcloth making. We also identified the root-associated microbiota of Paper mulberry and found that Pseudomonas and Rhizobia were enriched in its roots and may provide the source of nitrogen for its stems and leaves via symbiotic nitrogen fixation. Collectively, these results suggest that Paper mulberry might have undergone adaptive evolution and recruited nitrogen-fixing microbes to promote growth by enhancing flavonoid production and altering lignin monomer composition. Our study provides significant insights into genetic basis of the usefulness of Paper mulberry in papermaking and barkcloth making, and as forage. These insights will facilitate further domestication and selection as well as industrial utilization of Paper mulberry worldwide.


Subject(s)
Broussonetia/genetics , Chromosomes, Plant/genetics , Genomics , Paper , Broussonetia/metabolism , Broussonetia/microbiology , Cellulose/biosynthesis , Evolution, Molecular , Flavonoids/biosynthesis , Genome, Plant/genetics , Lignin/biosynthesis , Molecular Sequence Annotation , Symbiosis
12.
J Cell Sci ; 130(23): 3988-4001, 2017 Dec 01.
Article in English | MEDLINE | ID: mdl-29061882

ABSTRACT

Here, we show that Arabidopsis ADF10 plays an important role in shaping the overall organization of apical actin filaments by promoting their turnover and ordering. ADF10 severs and depolymerizes actin filaments in vitro and is distributed throughout the entire pollen tube. In adf10 mutants, severing and monomer dissociation events for apical actin filaments are reduced, and the apical actin structure extends further toward the tube base than in wild-type tubes. In particular, the percentage of apical actin filaments that form large angles to the tube growth axis is much higher in adf10 pollen tubes, and the actin filaments are more randomly distributed, implying that ADF10 promotes their ordering. Consistent with the role of apical actin filaments in physically restricting the movement of vesicles, the region in which apical vesicles accumulate is enlarged at the tip of adf10 pollen tubes. Both tipward and backward movements of small vesicles are altered within the growth domain of adf10 pollen tubes. Thus, our study suggests that ADF10 shapes the organization of apical actin filaments to regulate vesicle trafficking and pollen tube growth.


Subject(s)
Actin Cytoskeleton/metabolism , Actin Depolymerizing Factors/genetics , Arabidopsis Proteins/genetics , Gene Expression Regulation, Plant , Pollen Tube/metabolism , Protein Transport/genetics , Actins/metabolism , Arabidopsis/metabolism , Pollen/genetics , Pollen/metabolism
13.
Int J Mol Sci ; 18(8)2017 Aug 16.
Article in English | MEDLINE | ID: mdl-28813005

ABSTRACT

The WOX (WUSCHEL-related homeobox) is a plant-specific transcription factor involved in plant development and stress response. However, few studies have been reported on the WOX gene in woody plants. In this study, 10 BpWOX genes were isolated from paper mulberry by RACE-PCR and categorized into three clades through phylogenetic analysis, ancient, intermediate and WUS clade. Among them, five members had the transcriptional activity detected by yeast one-hybrid and seven were uniquely localized to the nucleus through green fluorescent protein (GFP) observation. The expression patterns of BpWOX genes in different tissues and under diverse treatments were quantified by the qRT-PCR method. Results showed that BpWUS was expressed in the apical bud, stem and root, BpWOX5 and BpWOX7 functioned only in the root tip, and three BpWOXs regulated leaf development redundantly. BpWOX9 and BpWOX10 were induced by indole-3-acetic acid (IAA) or jasmonic acid (JA), while BpWOX2 was repressed by five phytohormones. Interestingly, most BpWOX genes were responsive to the abiotic stress stimuli of drought, salt, cold, and cadmium (CdCl2). Together, our study revealed that BpWOXs were functionally divergent during paper mulberry development and environmental adaptation, which might be related to their evolutionary relationships. Our work will benefit the systematic understanding of the precise function of WOX in plant development and environmental stress responses.


Subject(s)
Gene Expression Regulation, Plant/physiology , Morus , Multigene Family , Phylogeny , Plant Proteins , Transcription Factors , Transcription, Genetic/physiology , Morus/genetics , Morus/metabolism , Plant Proteins/biosynthesis , Plant Proteins/genetics , Transcription Factors/biosynthesis , Transcription Factors/genetics
14.
Plant Cell Environ ; 37(7): 1548-60, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24372484

ABSTRACT

Multiple cellular events like dynamic actin reorganization and hydrogen peroxide (H(2)O(2)) production were demonstrated to be involved in abscisic acid (ABA)-induced stomatal closure. However, the relationship between them as well as the underlying mechanisms remains poorly understood. Here, we showed that H(2)O(2) generation is indispensable for ABA induction of actin reorganization in guard cells of Arabidopsis that requires the presence of ARP2/3 complex. H(2)O(2) -induced stomatal closure was delayed in the mutants of arpc4 and arpc5, and the rate of actin reorganization was slowed down in arpc4 and arpc5 in response to H(2)O(2), suggesting that ARP2/3-mediated actin nucleation is required for H(2)O(2) -induced actin cytoskeleton remodelling. Furthermore, the expression of H(2)O(2) biosynthetic related gene AtrbohD and the accumulation of H(2)O(2) was delayed in response to ABA in arpc4 and arpc5, demonstrating that misregulated actin dynamics affects H(2)O(2) production upon ABA treatment. These results support a possible causal relation between the production of H(2)O(2) and actin dynamics in ABA-mediated guard cell signalling: ABA triggers H(2)O(2) generation that causes the reorganization of the actin cytoskeleton partially mediated by ARP2/3 complex, and ARP2/3 complex-mediated actin dynamics may feedback regulate H(2)O(2) production.


Subject(s)
Actin-Related Protein 2-3 Complex/metabolism , Actins/metabolism , Arabidopsis/physiology , Hydrogen Peroxide/pharmacology , Plant Stomata/physiology , Abscisic Acid/pharmacology , Actin Cytoskeleton/drug effects , Actin Cytoskeleton/metabolism , Arabidopsis/drug effects , Arabidopsis Proteins/metabolism , Bridged Bicyclo Compounds, Heterocyclic/pharmacology , Depsipeptides/pharmacology , Models, Biological , Mutation/genetics , Plant Stomata/cytology , Plant Stomata/drug effects , Polymerization/drug effects , Protein Subunits/metabolism , Thiazolidines/pharmacology
15.
Plant Cell ; 25(5): 1803-17, 2013 May.
Article in English | MEDLINE | ID: mdl-23715472

ABSTRACT

Apical actin filaments are crucial for pollen tube tip growth. However, the specific dynamic changes and regulatory mechanisms associated with actin filaments in the apical region remain largely unknown. Here, we have investigated the quantitative dynamic parameters that underlie actin filament growth and disappearance in the apical regions of pollen tubes and identified villin as the major player that drives rapid turnover of actin filaments in this region. Downregulation of Arabidopsis thaliana VILLIN2 (VLN2) and VLN5 led to accumulation of actin filaments at the pollen tube apex. Careful analysis of single filament dynamics showed that the severing frequency significantly decreased, and the lifetime significantly increased in vln2 vln5 pollen tubes. These results indicate that villin-mediated severing is critical for turnover and departure of actin filaments originating in the apical region. Consequently, the construction of actin collars was affected in vln2 vln5 pollen tubes. In addition to the decrease in severing frequency, actin filaments also became wavy and buckled in the apical cytoplasm of vln2 vln5 pollen tubes. These results suggest that villin confers rigidity upon actin filaments. Furthermore, an observed decrease in skewness of actin filaments in the subapical region of vln2 vln5 pollen tubes suggests that villin-mediated bundling activity may also play a role in the construction of actin collars. Thus, our data suggest that villins promote actin turnover at pollen tube tips and facilitate the construction of actin collars.


Subject(s)
Actins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Microfilament Proteins/metabolism , Pollen Tube/metabolism , Actin Cytoskeleton/genetics , Actin Cytoskeleton/metabolism , Actins/genetics , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Gene Expression Regulation, Plant , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Microfilament Proteins/genetics , Microscopy, Confocal , Microscopy, Fluorescence , Models, Biological , Mutation , Plants, Genetically Modified , Pollen Tube/genetics , Pollen Tube/growth & development , Reverse Transcriptase Polymerase Chain Reaction , Transport Vesicles/metabolism , rab GTP-Binding Proteins/genetics , rab GTP-Binding Proteins/metabolism
16.
Plant Cell ; 22(11): 3745-63, 2010 Nov.
Article in English | MEDLINE | ID: mdl-21098731

ABSTRACT

Actin cables in pollen tubes serve as molecular tracks for cytoplasmic streaming and organelle movement and are formed by actin bundling factors like villins and fimbrins. However, the precise mechanisms by which actin cables are generated and maintained remain largely unknown. Fimbrins comprise a family of five members in Arabidopsis thaliana. Here, we characterized a fimbrin isoform, Arabidopsis FIMBRIN5 (FIM5). Our results show that FIM5 is required for the organization of actin cytoskeleton in pollen grains and pollen tubes, and FIM5 loss-of-function associates with a delay of pollen germination and inhibition of pollen tube growth. FIM5 decorates actin filaments throughout pollen grains and tubes. Actin filaments become redistributed in fim5 pollen grains and disorganized in fim5 pollen tubes. Specifically, actin cables protrude into the extreme tips, and their longitudinal arrangement is disrupted in the shank of fim5 pollen tubes. Consequently, the pattern and velocity of cytoplasmic streaming were altered in fim5 pollen tubes. Additionally, loss of FIM5 function rendered pollen germination and tube growth hypersensitive to the actin-depolymerizing drug latrunculin B. In vitro biochemical analyses indicated that FIM5 exhibits actin bundling activity and stabilizes actin filaments. Thus, we propose that FIM5 regulates actin dynamics and organization during pollen germination and tube growth via stabilizing actin filaments and organizing them into higher-order structures.


Subject(s)
Actins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis , Germination/physiology , Membrane Glycoproteins/metabolism , Microfilament Proteins/metabolism , Pollen Tube/growth & development , Pollen/metabolism , Actins/ultrastructure , Arabidopsis/anatomy & histology , Arabidopsis/physiology , Arabidopsis Proteins/genetics , Binding Sites , Crosses, Genetic , Cytoplasmic Streaming , Genetic Complementation Test , Germ Cells, Plant/cytology , Germ Cells, Plant/metabolism , Membrane Glycoproteins/genetics , Microfilament Proteins/genetics , Pollen/ultrastructure , Pollen Tube/ultrastructure , Protein Isoforms/genetics , Protein Isoforms/metabolism , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism
17.
Plant Cell ; 22(8): 2749-67, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20807879

ABSTRACT

A dynamic actin cytoskeleton is essential for pollen germination and tube growth. However, the molecular mechanisms underlying the organization and turnover of the actin cytoskeleton in pollen remain poorly understood. Villin plays a key role in the formation of higher-order structures from actin filaments and in the regulation of actin dynamics in eukaryotic cells. It belongs to the villin/gelsolin/fragmin superfamily of actin binding proteins and is composed of six gelsolin-homology domains at its core and a villin headpiece domain at its C terminus. Recently, several villin family members from plants have been shown to sever, cap, and bundle actin filaments in vitro. Here, we characterized a villin isovariant, Arabidopsis thaliana VILLIN5 (VLN5), that is highly and preferentially expressed in pollen. VLN5 loss-of-function retarded pollen tube growth and sensitized actin filaments in pollen grains and tubes to latrunculin B. In vitro biochemical analyses revealed that VLN5 is a typical member of the villin family and retains a full suite of activities, including barbed-end capping, filament bundling, and calcium-dependent severing. The severing activity was confirmed with time-lapse evanescent wave microscopy of individual actin filaments in vitro. We propose that VLN5 is a major regulator of actin filament stability and turnover that functions in concert with oscillatory calcium gradients in pollen and therefore plays an integral role in pollen germination and tube growth.


Subject(s)
Actins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Microfilament Proteins/metabolism , Pollen Tube/growth & development , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Bridged Bicyclo Compounds, Heterocyclic/pharmacology , Calcium/metabolism , Cytochalasin D/pharmacology , Microfilament Proteins/genetics , Mutation , RNA, Plant/genetics , Thiazolidines/pharmacology
18.
Plant Cell ; 21(12): 3868-84, 2009 Dec.
Article in English | MEDLINE | ID: mdl-20023198

ABSTRACT

Cytoplasmic actin cables are the most prominent actin structures in plant cells, but the molecular mechanism underlying their formation is unknown. The function of these actin cables, which are proposed to modulate cytoplasmic streaming and intracellular movement of many organelles in plants, has not been studied by genetic means. Here, we show that Arabidopsis thaliana formin3 (AFH3) is an actin nucleation factor responsible for the formation of longitudinal actin cables in pollen tubes. The Arabidopsis AFH3 gene encodes a 785-amino acid polypeptide, which contains a formin homology 1 (FH1) and a FH2 domain. In vitro analysis revealed that the AFH3 FH1FH2 domains interact with the barbed end of actin filaments and have actin nucleation activity in the presence of G-actin or G actin-profilin. Overexpression of AFH3 in tobacco (Nicotiana tabacum) pollen tubes induced excessive actin cables, which extended into the tubes' apices. Specific downregulation of AFH3 eliminated actin cables in Arabidopsis pollen tubes and reduced the level of actin polymers in pollen grains. This led to the disruption of the reverse fountain streaming pattern in pollen tubes, confirming a role for actin cables in the regulation of cytoplasmic streaming. Furthermore, these tubes became wide and short and swelled at their tips, suggesting that actin cables may regulate growth polarity in pollen tubes. Thus, AFH3 regulates the formation of actin cables, which are important for cytoplasmic streaming and polarized growth in pollen tubes.


Subject(s)
Actin Cytoskeleton/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/cytology , Membrane Proteins/metabolism , Pollen Tube/growth & development , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Cytoplasmic Streaming , DNA, Complementary/genetics , Gene Expression Regulation, Plant , Membrane Proteins/genetics , Plants, Genetically Modified/cytology , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Pollen Tube/metabolism , RNA, Plant/genetics
19.
J Integr Plant Biol ; 51(8): 740-50, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19686371

ABSTRACT

Actin cytoskeleton undergoes rapid reorganization in response to internal and external cues. How the dynamics of actin cytoskeleton are regulated, and how its dynamics relate to its function are fundamental questions in plant cell biology. The pollen tube is a well characterized actin-based cell morphogenesis in plants. One of the striking features of actin cytoskeleton characterized in the pollen tube is its surprisingly low level of actin polymer. This special phenomenon might relate to the function of actin cytoskeleton in pollen tubes. Understanding the molecular mechanism underlying this special phenomenon requires careful analysis of actin-binding proteins that modulate actin dynamics directly. Recent biochemical and biophysical analyses of several highly conserved plant actin-binding proteins reveal unusual and unexpected properties, which emphasizes the importance of carefully analyzing their action mechanism and cellular activity. In this review, we highlight an actin monomer sequestering protein, a barbed end capping protein and an F-actin severing and dynamizing protein in plant. We propose that these proteins function in harmony to regulate actin dynamics and maintain the low level of actin polymer in pollen tubes.


Subject(s)
Actins/metabolism , Pollen Tube/metabolism , Actin Capping Proteins/chemistry , Actin Capping Proteins/genetics , Actin Capping Proteins/metabolism , Actin Capping Proteins/physiology , Microfilament Proteins/chemistry , Microfilament Proteins/genetics , Microfilament Proteins/metabolism , Microfilament Proteins/physiology , Models, Biological , Models, Molecular , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/physiology
20.
J Biochem Mol Biol ; 40(6): 1083-9, 2007 Nov 30.
Article in English | MEDLINE | ID: mdl-18047807

ABSTRACT

The HAP complex has been found in many eukaryotic organisms. HAP recognizes the CCAAT box present in the promoters of 30% of all eukaryotic genes. The HAP complex consists of three subunits--HAP2, HAP3 and HAP5. In this paper, we report the biological function of the AtHAP3b gene that encodes one of the HAP3 subunits in Arabidopsis. Compared with wild-type plants, hap3b-1 and hap3b-2 mutants exhibited a delayed flowering time under long-day photoperiod conditions. Moreover, the transcription levels of FT were substantially lower in the mutants than in the wild-type plants. These results imply that AtHAP3b may function in the control of flowering time by regulating the expression of FT in Arabidopsis. In a subsequent study, AtHAP3b was found to be induced by osmotic stress. Under osmotic stress conditions, the hap3b-1 and hap3b-2 mutants flowered considerably later than the wild-type plants. These results suggest that the AtHAP3b gene plays more important roles in the control of lowering under osmotic stress in Arabidopsis.


Subject(s)
Arabidopsis Proteins/physiology , Arabidopsis/physiology , CCAAT-Binding Factor/physiology , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Base Sequence , CCAAT-Binding Factor/genetics , DNA Primers/genetics , DNA, Bacterial/genetics , DNA, Plant/genetics , Flowers/growth & development , Flowers/physiology , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Genes, Plant , Genetic Complementation Test , Mutagenesis, Insertional , Osmotic Pressure , Phenotype , Photoperiod , Plants, Genetically Modified
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