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1.
Clin Epigenetics ; 15(1): 65, 2023 04 18.
Article in English | MEDLINE | ID: mdl-37072801

ABSTRACT

BACKGROUND: The detection of peritoneal metastasis (PM) is limited by current imaging tools. In this prospective study, we aimed to evaluate the sensitivity and specificity of peritoneal cell-free DNA (cfDNA) for diagnosis of PM. METHODS: Colorectal cancer (CRC) patients with/without PM were enrolled. The cfDNA experimental personnel and statists were blinded to the diagnosis of PM. Ultradeep sequencing covering large genomic regions (35000X, Next-generation sequencing) of cfDNA in peritoneal lavage fluid (FLD) and matched tumor tissues was performed. RESULTS: A total of 64 cases were recruited prospectively and 51 were enrolled into final analysis. In training cohort, 100% (17/17) PM patients obtained positive FLD cfDNA, comparing to 5/23 (21.7%) in patients without PM. Peritoneal cfDNA had a high sensitivity of 100% and specificity of 77.3% for diagnosis of PM (AUC: 0.95). In validation group of 11, 5/6 (83%) patients with PM obtained positive FLD cfDNA, comparing to 0/5 in non-PM (P = 0.031) with a sensitivity of 83.3% and specificity of 100%. Positive FLD cfDNA was associated with poor recurrence-free survival (P = 0.013) and was preceding radiographic evidence of recurrence. CONCLUSIONS: Peritoneal cfDNA is a promising sensitive biomarker for earlier detection of PM in CRC than current radiological tools. It can potentially guide selection for targeted therapies and serve as a surrogate instead of laparoscopic explore in the future. Trial Registration Chinese Clinical Trial Registry at chictr.org.cn (ChiCTR2000035400). URL: http://www.chictr.org.cn/showproj.aspx?proj=57626.


Subject(s)
Cell-Free Nucleic Acids , Colorectal Neoplasms , Peritoneal Neoplasms , Humans , Biomarkers, Tumor/genetics , Cell-Free Nucleic Acids/genetics , Colorectal Neoplasms/diagnosis , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , DNA Methylation , Mutation , Peritoneal Neoplasms/diagnosis , Peritoneal Neoplasms/genetics , Prospective Studies
2.
Cell Commun Signal ; 20(1): 111, 2022 07 23.
Article in English | MEDLINE | ID: mdl-35870943

ABSTRACT

BACKGROUND: The screening biomarkers for early detection of colorectal cancer (CRC) is lacking. The aim is to identify epigenetic silenced genes and clarify its roles and underlying mechanism in CRC. We conducted integrative analyses of epigenome-wide Human Methylation 450 K arrays and transcriptome to screen out candidate epigenetic driver genes with transcription silencing. Methylated silencing HAND2 were identified and verified in large CRC cohort. The mechanism of HAND2 expression by promoter inhibition were clarified both in vitro and vivo assays. Cell biofunctional roles of HAND2 methylation was investigated in CRC cells. HAND2 reconstitution were constructed by lentivirus plasmid and tumor xenograft model of HAND2 were built subcutaneously. Genomic mRNA analysis by RNA-sequencing and subsequent GSEA analysis were performed to identify potential target of HAND2 and qPCR/WB was conducted to identify the results. RESULTS: We firstly reported high frequency of HAND2 methylation in promoter in CRC and hypermethylation was negatively correlated with expression silencing and leaded to poor survival in several CRC cohort patients. 5-Aza treatment to demethylated HAND2 could revert its expression in CRC cells. Functionally, HAND2 reconstitution can inhibit cell proliferation, invasion and migration in vitro. In tumor xenograft, HAND2 reconstruction significantly repressed tumor growth when compared to control vector. Thousands of aberrant expressed genes were observed in the heatmap of RNA-sequencing data. HAND2 reconstitution could bind to ERK and reduce its phosphorylation by CoIP assay. These above results showed HAND2 reconstitution perturbed the activation of MAPK/ERK signaling by reduction of ERK phosphorylation. CONCLUSIONS: HAND2 is one tumor suppressor by targeting ERK signaling and one potential epigenetic driver gene in CRC. Video Abstract.


Subject(s)
Colorectal Neoplasms , Gene Silencing , Biomarkers, Tumor/metabolism , Cell Line, Tumor , Cell Proliferation/genetics , Colorectal Neoplasms/pathology , DNA Methylation/genetics , Epigenesis, Genetic , Gene Expression Regulation, Neoplastic , Genes, Tumor Suppressor , Humans , RNA/metabolism , Transcription Factors/metabolism
4.
Colorectal Dis ; 23(11): 2846-2858, 2021 11.
Article in English | MEDLINE | ID: mdl-34411399

ABSTRACT

AIM: Proactive detection and treatment strategies have achieved encouraging survival outcomes for patients with early peritoneal metastases (PM), but these costly and invasive approaches can only be applied to selected high-risk patients. This meta-analysis aimed to identify the risk factors for metachronous PM after curative surgery for colorectal cancer (CRC). METHOD: The study was registered at PROSPERO (CRD42020219187). Databases were searched for studies comparing clinical and histopathological characteristics between patients with metachronous peritoneal metastases from colorectal cancer (pmCRC) and patients without (non-pmCRC). RESULTS: Thirty-six studies were included. Metachronous PM were positively associated with perforation (OR 1.920; 95% CI 1.144-3.223; P = 0.014), poor differentiation (OR 2.291; 1.603-3.275; P < 0.001), T4 (OR 2.897; 1.248-6.726; P = 0.013), N1-2 (OR 3.429; 2.684-4.381; P < 0.001), mucinous adenocarcinoma (OR 4.175; 1.798-9.692; P = 0.001), obstruction (OR 4.467; 1.919-10.398; P = 0.001), synchronous ovarian metastases (OR 5.005; 1.140-21.977; P = 0.033), positive peritoneal carcinoembryonic antigen mRNA (OR 9.472; 3.643-24.631; P < 0.001), elevated serum carcinoembryonic antigen (preoperative group, OR 3.545, 1.486-8.459, P = 0.004; postoperative group, OR 13.673, 2.222-84.129, P = 0.005), elevated serum cancer antigen 19-9 (preoperative group, OR 5.281, 2.146-12.994, P < 0.001; postoperative group, OR 18.646, 6.429-54.083, P < 0.001) and positive peritoneal cytology (OR 25.884; 11.372-58.913; P < 0.001). CONCLUSION: These evidence-based risk factors are conducive to designing early detection and proactive treatment strategies, enabling precision medicine.


Subject(s)
Adenocarcinoma, Mucinous , Colorectal Neoplasms , Peritoneal Neoplasms , Humans , Peritoneum , Prognosis , Risk Factors
5.
J Environ Manage ; 286: 112230, 2021 May 15.
Article in English | MEDLINE | ID: mdl-33636622

ABSTRACT

Debris flow alluvial fans (DFAFs) are vulnerable, although they can be used as a natural resource. The relationships between different factors related to DFAF systems and between these factors and systems are important both for identifying the risks and opportunities presented by DFAFs and for tracking system status. In this regard, resilience may be used to characterize the status of a DFAF. This study aimed to explore the processes and mechanisms of interactions among the social, economic, and ecological factors related to DFAF with respect to resilience, and to discuss potential problems in a representative DFAF. Based on the site condition and characteristics of the Awang DFAF (China) in the period 1996-2017, we formed a comprehensive indicator evaluation framework by analyzing disturbance, function, and feedback. We also established a model for evaluating resilience by integrating the analytic hierarchy process (AHP) - an entropy evaluation method (EEM) and set pair analysis (SPA). The results showed that the system of the studied DFAF was dynamically stable. The domination of the ecological system was subsequently superseded by social and economic resilience. While disturbance had direct and immediate effects, coping ability was cumulative and characterized by hysteresis at a particular response time. Overall, resilience fluctuated within an acceptable range rather than linearly increasing or decreasing. This analysis illuminated the dynamic processes of DFAFs and contributed to the understanding and planning of system trade-offs and degraded-land utilization.


Subject(s)
Conservation of Natural Resources , Household Articles , China , Ecosystem
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