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1.
Hum Vaccin Immunother ; 20(1): 2327145, 2024 Dec 31.
Article in English | MEDLINE | ID: mdl-38488143

ABSTRACT

We evaluated the vaccine effectiveness (VE) of two doses of recombinant zoster vaccine (RZV) against herpes zoster (HZ) and postherpetic neuralgia (PHN) in Chinese adults at Kaiser Permanente Southern California (KPSC). Chinese KPSC members were identified based on self-reported ethnicity or self-reported preferred spoken/written language. Those aged ≥50 years who received two doses of RZV 4 weeks to ≤ 6 months apart were matched 1:4 to RZV unvaccinated Chinese members and followed through June 2022; second doses were accrued 6/1/2018-12/31/2020. We estimated incidence and adjusted hazard ratios (aHRs) with 95% confidence intervals (CIs) comparing outcomes (HZ and PHN). Adjusted VE (%) was calculated as (1-aHR)×100. 3978 RZV vaccinated Chinese members were matched to 15,912 RZV unvaccinated Chinese members. The incidence per 1000 person-years (95% CI) of HZ in the vaccinated group was 1.5 (0.9-2.5) and 10.9 (9.8-12.1) in the unvaccinated group; aHR (95% CI) was 0.12 (0.07-0.21). Adjusted VE (95% CI) was 87.6% (78.9-92.7) against HZ. We identified 0 PHN cases in the vaccinated group and 19 in the unvaccinated group. Among Chinese adults aged ≥50 years, two doses of RZV provided substantial protection against HZ and PHN supporting the real-world effectiveness of the vaccine in this population.


Subject(s)
Herpes Zoster Vaccine , Herpes Zoster , Neuralgia, Postherpetic , Humans , United States , Herpes Zoster/epidemiology , Herpes Zoster/prevention & control , Neuralgia, Postherpetic/epidemiology , Neuralgia, Postherpetic/prevention & control , Herpesvirus 3, Human , Vaccines, Synthetic , China/epidemiology
2.
J Adv Res ; 40: 153-166, 2022 09.
Article in English | MEDLINE | ID: mdl-36100323

ABSTRACT

INTRODUCTION: Janus kinase 3 (JAK3) is a well-established oncogene in clear cell renal cell carcinoma (ccRCC). The methylation status of oncogene promoters has emerged as biomarkers for cancer diagnosis and prognosis. OBJECTIVE: This study aims to investigate the biological and clinical significance of JAK3 promoter methylation in ccRCC. METHODS: We analyzed the relationship of JAK3 promoter methylation with its mRNA expression, overall survival, and immune cell infiltration in a cohort obtained from The Cancer Genome Atlas (TCGA), which was further validated by another independent cohort. We further validated correlations of JAK3 promoter methylation with JAK3 expression, overall survival, and immune cell infiltration in an independent ccRCC cohort (Sun Yat-sen University Cancer Center (SYSUCC) cohort) by methods of immunohistochemistry (IHC) and pyrosequencing. RESULTS: We found JAK3 promoter was significantly hypomethylated in tumor tissues compared to normal adjacent tissues in ccRCC, and JAK3 promoter hypomethylation was strongly correlated with high JAK3 mRNA expression in all three ccRCC cohorts we examined. JAK3 promoter hypomethylation predicted advanced clinicopathological characteristics and shorter overall survival (TCGA cohort and SYSUCC cohort). Furthermore, we found that JAK3 promoter methylation was significantly associated with immune cell infiltration and expression of immune checkpoint molecules (TCGA cohort and CPTAC cohort). Finally, our SYSUCC cohort validated that JAK3 promoter methylation was correlated with CD4+ and CD8+ T cell infiltration in ccRCC tumor tissues. CONCLUSION: Our data demonstrated that the crucial role of JAK3 promoter methylation in its expression regulation and tumor microenvironment. JAK3 promoter methylation and expression are associated with clinicopathological characteristics, overall survival, and immune cell infiltration in ccRCC. We propose a rationale for further validation of JAK3 promoter methylation as a molecular biomarker for predicting responses to immune checkpoint inhibitors in ccRCC.


Subject(s)
Carcinoma, Renal Cell , Kidney Neoplasms , Biomarkers, Tumor/genetics , Biomarkers, Tumor/metabolism , Carcinoma, Renal Cell/genetics , Carcinoma, Renal Cell/metabolism , Carcinoma, Renal Cell/pathology , DNA Methylation , Humans , Janus Kinase 3/genetics , Janus Kinase 3/metabolism , Kidney Neoplasms/genetics , Kidney Neoplasms/metabolism , Kidney Neoplasms/pathology , Prognosis , Promoter Regions, Genetic , RNA, Messenger/genetics , RNA, Messenger/metabolism , Tumor Microenvironment
3.
Front Microbiol ; 13: 992816, 2022.
Article in English | MEDLINE | ID: mdl-36090080

ABSTRACT

Vegetation recovery is an important marker of ecosystem health in the mining area. Clarifying the influence of vegetation recovery on the characteristics of soil microbial community and its assembly process can improve our understanding of the ecological resilience and self-maintaining mechanism in the open-pit mining area. For this purpose, we employed MiSeq high-throughput sequencing coupled with null model analysis to determine the composition, molecular ecological network characteristics, key bacterial and fungal clusters, and the assembly mechanism of the soil microbial communities in shrubs (BL), coniferous forest (CF), broad-leaved forests (BF), mixed forest (MF), and the control plot (CK, the poplar plantation nearby that had been continuously grown for over 30 a without disturbance). The results showed that the vegetation restoration model had a significant influence on the α-diversity of the microbial community (p < 0.05). Compared with CK, Sobs and Shannon index of MF and CF have increased by 35.29, 3.50, and 25.18%, 1.05%, respectively, whereas there was no significant difference in the α-diversity of fungal community among different vegetation restoration types, Actinobacteria, Chloroflexi, Proteobacteria, and Acidobacteria were the dominant phyla. The diversity of the first two phyla was significantly higher than those of CK. However, the diversity of the last two phyla was dramatically lower than those of CK (p < 0.05). Ascomycota and Basidiomycota were dominant phyla in the fungal community. The abundance and diversity of Ascomycota were significantly higher than those of CK, while the abundance and diversity of the latter were considerably lower than those of CK (p < 0.05). The stochastic process governed the assembly of the soil microbial community, and the contribution rate to the bacterial community construction of CK, CF, BF, and MF was 100.0%. Except for MF, where the soil fungal community assembly was governed by the deterministic process, all other fungal communities were governed by the stochastic process. Proteobacteria and Acidobacteria are key taxa of the bacterial network, while Mortierellales, Thelebolales, Chaetothyriales, and Hypocreales are the key taxa of the fungal network. All these results might provide the theoretical foundation for restoring the fragile ecosystem in the global mining region.

4.
Front Microbiol ; 13: 972300, 2022.
Article in English | MEDLINE | ID: mdl-35983321

ABSTRACT

Understanding the interactions between the soil microbial communities and species is critical in the remediation of heavy metal-contaminated soil. Biochar has been widely applied as a stabilizer in the in situ remediation of cadmium (Cd)-contaminated soils in mining areas. However, the rebuilding of the microbial taxa of rare and abundant species by biochar and their cooperative resistance to Cd stress remains elusive. In this pursuit, the present study envisaged the effects of two types of biochars viz., poplar bark biochar (PB) and thiourea-modified poplar bark biochar (TP) on the rare and abundant bacterial and fungal taxa by using pot experiments. The results demonstrated that the PB and TP treatments significantly reduced the leached Cd content, by 35.13 and 68.05%, respectively, compared with the control group (CK), in the reclaimed soil of the mining area. The application of biochar significantly improved the physicochemical properties like pH and Soil Organic Matter (SOM) of the soil. It was observed that TP treatment was superior to the PB and CK groups in increasing the diversity of the soil abundant and rare species of microbial taxa. Compared with the CK group, the application of PB and TP enhanced and elevated the complexity of the microbial networks of rare and abundant taxa, increased the number and types of network core microorganisms, reshaped the network core microorganisms and hubs, and boosted the microbial resistance to Cd stress. Our results indicate the response of rare and abundant microbial taxa to biochar application and the mechanism of their synergistic remediation of Cd-contaminated soil, thereby providing technical feasibility for in situ remediation of Cd-contaminated soil in mining areas.

5.
Environ Pollut ; 313: 120023, 2022 Nov 15.
Article in English | MEDLINE | ID: mdl-36030953

ABSTRACT

In situ anoxic bioremediation is an easy-to-use technology to remediate polycyclic aromatic hydrocarbon (PAH)-contaminated soil. Degradation of PAHs mediated by soil bacteria and archaea using CO2 as the electron acceptor is an important process for eliminating PAHs under methanogenic conditions; however, knowledge of the performance and mechanisms involved is poorly unveiled. In this study, the effectiveness and efficiency of NaHCO3 (CO2) as an electron acceptor to stimulate the degradation of PAHs by bacteria and archaea in highly contaminated soil were investigated. The results showed that CO2 addition (EC2000) promoted PAH degradation compared to soil without added CO2 (EC0), with 4.18%, 9.01%-8.05%, and 6.19%-12.45% increases for 2-, 3- and 4-ring PAHs after 250 days of incubation, respectively. Soil bacterial abundances increased with increasing incubation time, especially for EC2000 (2.90 × 108 g-1 soil higher than EC0, p < 0.05). Different succession patterns of the soil bacterial and archaeal communities during PAH degradation were observed. According to the PCoA and ANOSIM results, the soil bacterial communities were greatly (ANOSIM: R = 0.7232, P = 0.001) impacted by electron acceptors, whereas significant differences in the archaeal communities were not observed (ANOSIM: R = 0.553, P = 0.001). Soil bacterial and archaeal co-occurrence network analyses showed that positive correlations outnumbered the negative correlations throughout the incubation period for both treatments (e.g., EC0 and EC2000), suggesting the prevalence of coexistence/cooperation within and between these two domains rather than competition. The higher complexity, connectance, edge, and node numbers in EC2000 revealed stronger linkage and a more stable co-occurrence network compared to EC0. The results of this study could improve the knowledge on the removal of PAHs and the responses of soil bacteria and archaea to CO2 application, as well as a scientific basis for the in situ anoxic bioremediation of PAH-contaminated industrial sites.


Subject(s)
Polycyclic Aromatic Hydrocarbons , Soil Pollutants , Archaea/metabolism , Bacteria/metabolism , Biodegradation, Environmental , Carbon Dioxide/metabolism , Polycyclic Aromatic Hydrocarbons/analysis , Soil , Soil Microbiology , Soil Pollutants/analysis
6.
Chemosphere ; 302: 134811, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35504469

ABSTRACT

Cadmium (Cd) pollution cause severe stress to soil microorganisms and biochar utilized for its ability to immobilize Cd in the soil effectively. However, the influence of biochar on the structure and function of the bacterial network under Cd stress is unclear. This research reports a pot experiment conducted to investigate the impact of 2.0% Italian poplar bark biochar (PB), 2.0% thiourea-modified biochar (TP), and control treatment (CK) on the complexity, stability and functional properties of the bacterial community under Cd stress. The results showed that: (1) Biochar increased the diversity of soil bacterial consortia under Cd stress (p < 0.05), and the diversity index demonstrated as order of CK < PB < TP; (2) Compared with CK network, the nodes number of PB and TP treatments networks were much higher, while the modularity and transitivity increased by 0.04% and 37.6%, 2.45% and 1.12%, respectively. The biochar amendment increased the stability and complexity of the network; (3) PICRUSt2 prediction results show that Xenobiotics biodegradation and metabolism membrane transport of TP treatment increased 62.52% and 53.62% compared with CK, respectively, which could be related to the decrease in Cd content according to principal component analysis. (4) The reduction of leaching Cd content caused network complexity and bacterial function changes by biochar amendment. TP amendment enhanced the complexity and stability of soil bacterial community under Cd stress, which will provide a scientific basis for in situ remediations of Cd-contaminated soils.


Subject(s)
Cadmium , Soil Pollutants , Bacteria/metabolism , Biodegradation, Environmental , Cadmium/analysis , Charcoal/chemistry , Soil/chemistry , Soil Pollutants/analysis , Thiourea
7.
Complement Ther Med ; 60: 102748, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34118389

ABSTRACT

The objective of this bibliometric review was to identify the volume, breadth, and characteristics of clinical studies evaluating Tai Chi published between January 2010 and January 2020. Five English and four Chinese language databases were searched. Following independent screening, 1018 eligible publications representing 987 studies were identified, which was a three-fold increase from the previous decade. Most common were randomized controlled trials (548/987, 55.5 %), followed by systematic reviews (157/987, 15.9 %), non-randomized controlled clinical studies (152/987, 15.4 %), case series (127/987, 12.9 %) and case reports (3/987, 0.3 %) that were conducted in China (730/987, 74.0 %), followed by the United States of America (123/987, 12.5 %) and South Korea (20/987, 2.0 %). Study participants were mostly in the adult (55.2 %) and/or older adult (72.0 %) age groups. The top ten diseases/conditions were hypertension, chronic obstructive pulmonary disease, diabetes, knee osteoarthritis, heart failure, depression, osteoporosis/osteopenia, breast cancer, coronary heart disease and insomnia. A quarter of the studies enrolled healthy participants to evaluate the effects of Tai Chi on health promotion/preservation, balance/falls, and physiological/biomechanical outcomes. Yang style Tai Chi was the most popular, followed by Chen and Sun style. Tai Chi was mostly commonly delivered face-to-face by a Tai Chi instructor in group settings for 60 min, three times a week, for 12 weeks. Most studies (93.8 %) reported at least one outcome in favor of Tai Chi. Adverse events were underreported (7.2 %). Over half fell short of expected intervention reporting standards, signalling the need for Tai Chi extensions to existing guidelines.


Subject(s)
Osteoarthritis, Knee , Pulmonary Disease, Chronic Obstructive , Tai Ji , Accidental Falls , Aged , Bibliometrics , Humans
8.
Environ Geochem Health ; 43(1): 23-36, 2021 Jan.
Article in English | MEDLINE | ID: mdl-32696201

ABSTRACT

Soil pollution at industrial sites is an important issue in China and in most other regions of the world. The accurate prediction of the spatial distribution of pollutants at contaminated industrial sites is a requirement for the development of most soil remediation strategies, and is commonly performed using spatial interpolation methods. However, significant and abrupt variations in the spatial distribution of pollutants decrease prediction accuracy. During this study, the use of partition interpolation methods was applied to benzo fluoranthene in four soil layers at a contaminated site to determine their ability to improve prediction accuracy in comparison to unpartitioned methods. The examined methods for partitioned interpolation included inverse distance weighting (IDW), radial basis function (RBF), and ordinary kriging (OK). The prediction results of the three methods for partitioned interpolation were compared, and the applicability of partition interpolation was determined. The prediction error associated with the partitioned interpolation methods decreased by 70% compared to unpartitioned interpolation. The prediction accuracy of IDW-based partition interpolation was higher than that of RBF- and OK-based partition interpolation techniques, and it was suitable for identification of highly polluted areas. Partition interpolation is also applicable to 12 other PAHs controlled by USEPA that can be detected, and the prediction effects could also verify this interpolation choice. In addition, the results also demonstrated that the more the maximum concentration deviated from the "norm", the greater the prediction error was caused by the smoothing effects of the interpolation models. These results suggest that the partition interpolation with IDW method can be effectively used to obtain relatively accurate spatial contaminant distribution information, and to identify highly polluted areas.


Subject(s)
Environmental Monitoring/methods , Soil Pollutants/analysis , China , Environmental Pollution/analysis , Environmental Pollution/prevention & control , Fluorenes/analysis , Forecasting , Spatial Analysis
9.
Sci Adv ; 6(20): eaba3418, 2020 05.
Article in English | MEDLINE | ID: mdl-32426509

ABSTRACT

Many animal viral proteins, e.g., Vpr of HIV-1, disrupt host mitosis by directly interrupting the mitotic entry switch Wee1-Cdc25-Cdk1. However, it is unknown whether plant viruses may use this mechanism in their pathogenesis. Here, we report that the 17K protein, encoded by barley yellow dwarf viruses and related poleroviruses, delays G2/M transition and disrupts mitosis in both host (barley) and nonhost (fission yeast, Arabidopsis thaliana, and tobacco) cells through interrupting the function of Wee1-Cdc25-CDKA/Cdc2 via direct protein-protein interactions and alteration of CDKA/Cdc2 phosphorylation. When ectopically expressed, 17K disrupts the mitosis of cultured human cells, and HIV-1 Vpr inhibits plant cell growth. Furthermore, 17K and Vpr share similar secondary structural feature and common amino acid residues required for interacting with plant CDKA. Thus, our work reveals a distinct class of mitosis regulators that are conserved between plant and animal viruses and play active roles in viral pathogenesis.


Subject(s)
Schizosaccharomyces pombe Proteins , Schizosaccharomyces , Animals , Cell Cycle Proteins/genetics , Cell Cycle Proteins/metabolism , Mitosis , Nuclear Proteins/metabolism , Phosphoprotein Phosphatases/metabolism , Protein-Tyrosine Kinases/genetics , Protein-Tyrosine Kinases/metabolism , Schizosaccharomyces/metabolism , Schizosaccharomyces pombe Proteins/metabolism , Viral Proteins/metabolism
10.
Sheng Wu Gong Cheng Xue Bao ; 36(12): 2824-2837, 2020 Dec 25.
Article in Chinese | MEDLINE | ID: mdl-33398975

ABSTRACT

In order to explore the microbial communities and functions of activated sludge in an Anaerobic-anoxic-oxic (A²/O) process under the start-up of Actinic reaction enzyme system (ARES) system and to understand the impact of the ARES system in domestic sewage treatment process, the activated sludge microbial community structure in the A²/O process system before and after ARES system start-up was analyzed by Illumina-HiSeq 2000 high-throughput sequencing platform. By combining with the main parameters related to the effect of sewage treatment, we analyzed the environmental functions of the microbial communities. The microbial community structure of activated sludge was significantly different before and after the ARES system start-up. There were 9 main bacterial phyla in the system (average relative abundance ≥1%), accounting for 96%-98% of the total bacteria sequenced. After the ARES system was started, the relative abundance of Betaproteobacteria and Chlorobi increased by 3.45%-3.85% and 0.45%-2.61%, respectively. In the anaerobic unit, the relative abundance of Bacteroidetes increased by 12.97%, while the Actinobacteria and Firmicutes decreased by 9.60% and 1.45%, respectively. At the genus level of bacteria, the relative abundance of Denitratisoma increased by 0.80%-3.27%, while the Haliangium and Arcobacter decreased by 3.36%-4.52% and 1.48%-3.45%, respectively. The relative abundance of bacteria was significantly different before and after the ARES system start-up. There were 7 abundant fungi phyla (average relative abundance ≥1%) in the system. After the ARES system was started, the relative abundance of Rozellomycota decreased by 42.71%-46.77%. In the anaerobic unit, the relative abundance of Ascomycota decreased by 13.39%, while the relative abundance of Glomeromycota increased by 13.86%. At the genus level of fungi. The relative abundance of Entomophthoraceae sp. and Glomcromycota sp. increased by 31.35%-36.50% and 6.27%-13.84%, respectively, while the Rozellomycota sp. and Xylochrysis lucida decreased by 42.71%-46.77% and 3.67%-5.54%, respectively. Our results showed that the application of ARES system caused the response of the microbial community to environmental changes, especially for the fungi communities, in the meanwhile, improved the effluent quality, especially the removal rate of total nitrogen.


Subject(s)
Microbiota , Sewage , Anaerobiosis , Ascomycota , Bioreactors , Nitrogen , Waste Disposal, Fluid
11.
Ecotoxicol Environ Saf ; 190: 110092, 2020 Mar 01.
Article in English | MEDLINE | ID: mdl-31874406

ABSTRACT

Integrated chemical-biological treatment is a promising alternative to remove PAHs from contaminated soil, wherein indigenous bacteria is the key factor for the biodegradation of residual PAHs after the application of chemical oxidation. However, systematical study on the impact of persulfate (PS) oxidation on indigenous bacteria as well as PAHs removal is still scarce. In this study, the influences of different PS dosages (1%, 3%, 6%, and 10% [w/w]), as well as various activation methods (native iron, H2O2, alkaline, ferrous iron, and heat) on PAHs removal and indigenous bacteria in highly contaminated aged soil were investigated. Apparent degradation of PAHs in the soil treated with PS oxidation was observed, and the removal efficiency of total PAHs in the soil ranged from 38.28% to 79.97%. The removal efficiency of total PAHs in the soil increased with increasing consumption of PS. However, the bacterial abundance in soil was negatively affected following oxidation for all of the treatments added with PS, with bacterial abundance in the soil decreased by 0.89-2.93 orders of magnitude compared to the untreated soil. Moreover, the number of total bacteria in the soil decreased as PS consumption increased. Different PS activation methods and PS dosages exhibited different influences on the bacterial community composition. Bacteria capable of degrading PAHs under anoxic conditions were composed predominantly by Proteobacteria and Firmicutes. The total amount of Proteobacteria and Firmicutes also decreased with increasing consumption of PS. The results of this study provide important insight for the design of PAHs contaminated soil remediation projects.


Subject(s)
Bacteria/metabolism , Biodegradation, Environmental , Polycyclic Aromatic Hydrocarbons/metabolism , Soil Microbiology , Soil Pollutants/metabolism , Hydrogen Peroxide/metabolism , Iron/chemistry , Oxidation-Reduction , Polycyclic Aromatic Hydrocarbons/analysis , Soil/chemistry , Soil Pollutants/analysis
12.
Environ Geochem Health ; 41(6): 2709-2730, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31144251

ABSTRACT

Accurate prediction of the spatial distribution of pollutants in soils based on applicable interpolation methods is often the basis for soil remediation in contaminated sites. However, the applicable interpolation method has not been determined for contaminated sites due to the complex spatial distribution characteristics and stronger local spatial variability of pollutants. In this research, the prediction accuracies of three interpolation methods (including the different values of their parameters) for the spatial distribution of benzo[b]fluoranthene (BbF) in four soil layers were compared. These included inverse distance weighting (IDW), radial basis function (RBF), ordinary kriging (OK). The results indicated: (1) IDW1 is applicable for the first layer, RBF-IMQ is applicable to the second, third, and fourth layers. (2) For IDW, the prediction error is bigger with high weight where high values and low values intersect, while the prediction error is smaller where high (or low) values aggregated distribution. (3) For RBF, if the pollutant concentration trend at the predicted location is consistent with the known points in its neighborhood, the prediction accuracy is higher. (4) IDW is suitable for fitting more drastic curved surfaces, while RBF is more effective for relatively gentle curved surfaces and OK is reasonable for curved surfaces without local outliers. (5) The interpolation uncertainty is positively associated with the contaminant concentration and local spatial variability. Therefore, we suggest the selection of the applicable interpolation model must be based on the principle of the model and the spatial distribution characteristics of the pollutants.


Subject(s)
Environmental Monitoring/statistics & numerical data , Soil Pollutants/analysis , China , Environmental Monitoring/methods , Fluorenes/analysis , Spatial Analysis , Uncertainty
13.
Cancer Manag Res ; 10: 3551-3560, 2018.
Article in English | MEDLINE | ID: mdl-30271203

ABSTRACT

INTRODUCTION: There is still lack of specific biomarkers in predicting the radiosensitivity of non-small cell lung cancer (NSCLC) patients in clinic. Previous studies have shown that the EGFR gene status may correlate with radiosensitivity of NSCLC. However, the underlying mechanisms remain unknown. The aim of this study was to further investigate the correlation between EGFR mutation status and the NSCLC cell radiosensitivity and to explore the possible cellular mechanism. METHODS: Eight NSCLC cell lines with different EGFR gene status were irradiated by linear accelerator, and the radiosensitivity between the cell lines was compared by cell colony formation assay and cell proliferation assay. Cell cycle and apoptosis were analysed by flow cytometry. Radiosensitivity-related protein expression was detected by Western blotting. RESULTS: In the present study, we found that NSCLC cell lines with the epidermal growth factor receptor (EGFR) gene mutations were more sensitive to X-ray irradiation than those with wild-type EGFR (P<0.05). No difference in radiosensitivity was observed between NSCLC cells with EGFR exon19 deletion (Del 19) mutation and exon 21 point mutation at position 858 (L858R) with or without T790M mutation (P<0.05), as well as between NSCLC cells with EGFR mutation and those with acquired EGFR-tyrosine kinase inhibitors (TKIs) resistance. Mechanistically, EGFR mutations promoted NSCLC cell apoptosis in response to X-ray irradiation through the upregulation of proapoptotic protein Bax and downregulation of anti-apoptotic proteins such as Bcl-2 and DNA-dependent protein kinase catalytic subunit. In addition, phosphorylated histone (γ-H2AX) foci assay showed that EGFR mutations sustained irradiation-induced DNA damage. CONCLUSION: Taken together, our study demonstrates that EGFR mutations are closely associated with the increased sensitivity of NSCLC cell lines to X-ray irradiation and that EGFR mutation status is a potentially useful indicator to evaluate the effectiveness of radiotherapy in the treatment of NSCLC.

14.
Neural Comput ; 30(11): 2855-2881, 2018 11.
Article in English | MEDLINE | ID: mdl-30216144

ABSTRACT

Analysis and forecasting of sequential data, key problems in various domains of engineering and science, have attracted the attention of many researchers from different communities. When predicting the future probability of events using time series, recurrent neural networks (RNNs) are an effective tool that have the learning ability of feedforward neural networks and expand their expression ability using dynamic equations. Moreover, RNNs are able to model several computational structures. Researchers have developed various RNNs with different architectures and topologies. To summarize the work of RNNs in forecasting and provide guidelines for modeling and novel applications in future studies, this review focuses on applications of RNNs for time series forecasting in environmental factor forecasting. We present the structure, processing flow, and advantages of RNNs and analyze the applications of various RNNs in time series forecasting. In addition, we discuss limitations and challenges of applications based on RNNs and future research directions. Finally, we summarize applications of RNNs in forecasting.


Subject(s)
Environment , Forecasting/methods , Neural Networks, Computer
15.
Acupunct Med ; 36(4): 261-266, 2018 08.
Article in English | MEDLINE | ID: mdl-29909400

ABSTRACT

OBJECTIVE: To preliminarily explore the effect of electroacupuncture (EA) on bladder and bowel dysfunction in patients with transverse myelitis. METHODS: Sixteen participants were treated with EA at bilateral BL32, BL33, and BL35 once a day, five times a week for the first 4 weeks, and once every other day, three times a week for the following 4 weeks. Patients were then followed up for 6 months. Bladder and bowel function, and the safety of EA, were assessed. RESULTS: After 8 weeks of treatment, five (5/16, 31%) patients resumed normal voiding, three (6/16, 38%) regained partially normal voiding, and five (5/16, 31%) had no change. After treatment, the residual urine volume decreased by 100 mL (IQR 53-393 mL; P<0.05) in nine patients with bladder voiding dysfunction; in 11 patients with urinary incontinence, the number of weekly urinary incontinence episodes, 24-hour urinary episodes, and nocturia episodes per night diminished by 14 (95% CI 5 to 22), 5 (95% CI 1 to 9), and 4 (95% CI 0 to 7) episodes, respectively (all P<0.05). After 8 weeks of treatment in eight patients with faecal retention, four (4/8, 50%) resumed normal bowel movements, three (3/8, 38%) regained partially normal bowel movements, and one (1/8, 13%) had no change. CONCLUSIONS: EA might be a promising alternative for the management of bladder and bowel dysfunction in patients with transverse myelitis. Randomised controlled trials are needed to confirm the effectiveness and safety of EA for this condition.


Subject(s)
Electroacupuncture , Myelitis, Transverse/therapy , Urinary Bladder/physiopathology , Acupuncture Points , Adult , Defecation , Female , Humans , Male , Middle Aged , Myelitis, Transverse/physiopathology , Prospective Studies , Urination , Young Adult
16.
PLoS One ; 13(2): e0192456, 2018.
Article in English | MEDLINE | ID: mdl-29466394

ABSTRACT

A precise predictive model is important for obtaining a clear understanding of the changes in dissolved oxygen content in crab ponds. Highly accurate interval forecasting of dissolved oxygen content is fundamental to reduce risk, and three-dimensional prediction can provide more accurate results and overall guidance. In this study, a hybrid three-dimensional (3D) dissolved oxygen content prediction model based on a radial basis function (RBF) neural network, K-means and subtractive clustering was developed and named the subtractive clustering (SC)-K-means-RBF model. In this modeling process, K-means and subtractive clustering methods were employed to enhance the hyperparameters required in the RBF neural network model. The comparison of the predicted results of different traditional models validated the effectiveness and accuracy of the proposed hybrid SC-K-means-RBF model for three-dimensional prediction of dissolved oxygen content. Consequently, the proposed model can effectively display the three-dimensional distribution of dissolved oxygen content and serve as a guide for feeding and future studies.


Subject(s)
Aquaculture , Oxygen/analysis , Water/chemistry , Forecasting , Neural Networks, Computer , Ponds , Solubility
17.
Zhongguo Zhen Jiu ; 36(1): 103-6, 2016 Jan.
Article in Chinese | MEDLINE | ID: mdl-26946755

ABSTRACT

The literature was analyzed on the improvement of motor sensory function, urination and defecation in myelitis treated with acupuncture and moxibustion and focused on the characteristics of the diagnosis and treatment. The literature on acupuncture and moxibustion treatment for myelitis was collected from CNKI, Wanfang, VIP and PubMed. The analysis included the characteristics of acupoint selection, methods of acupuncture and moxibustion, time of treatment, total treatment period, efficacy, follow-up, safety, etc. Totally, 26 articles were collected. The combined therapy of acupuncture and moxibustion was predominated (12/26, 46. 15%). For the motor and sensory impairment, the acupoints were mainly selected from the four limbs, the yangming meridians of hand and foot and those adjacent to the affected spinal segments and on the governor vessel as well as Jiaji (EX-B 2) points. For urinary impairment, the acupoints were selected mainly from the lower abdominal region on the conception vessel and the lumbosacral region on the bladder meridian. For the intestinal impairment, the acupoints were from the lower limb on the stomach meridian, the lower abdominal region on the conception vessel and the back points on the bladder meridian. The intervention started commonly in the first 3 months after onset. The total treatment period was in the range from 1 to 3 months. The efficacy of acupuncture and moxibustion was 69.19% to 82.56% for the improvement of motor sensory and urination, defecation function. The efficacy in follow-up was stable and the adverse reactions were not reported. It is viewed that on the basis of early diagnosis and active medication, acupuncture and moxibution achieve a certain of efficacy on the impairment of motor sensory function, urination and defecation. A clinical research is expected to further verify the efficacy.


Subject(s)
Acupuncture Therapy , Moxibustion , Myelitis/diagnosis , Myelitis/therapy , Sensation , Urinary Bladder/physiopathology , Databases, Bibliographic , Defecation , Humans , Motor Activity , Myelitis/physiopathology , Urination
18.
PLoS One ; 10(3): e0120655, 2015.
Article in English | MEDLINE | ID: mdl-25775125

ABSTRACT

BACKGROUND: The safety and health benefits of Tai Chi mind-body exercise has been documented in a large number of clinical studies focused on specific diseases and health conditions. The objective of this systematic review is to more comprehensively summarize the evidence base of clinical studies of Tai Chi for healthcare. METHODS AND FINDINGS: We searched for all types of clinical studies on Tai chi in PubMed, the Cochrane Library and four major Chinese electronic databases from their inception to July 2013. Data were analyzed using SPSS17.0 software. A total of 507 studies published between 1958 and 2013 were identified, including 43 (8.3%) systematic reviews of clinical studies, 255 (50.3%) randomized clinical trials, 90 (17.8%) non-randomized controlled clinical studies, 115 (22.7%) case series and 4 (0.8%) case reports. The top 10 diseases/conditions was hypertension, diabetes, osteoarthritis, osteoporosis or osteopenia, breast cancer, heart failure, chronic obstructive pulmonary disease, coronary heart disease, schizophrenia, and depression. Many healthy participants practiced Tai Chi for the purpose of health promotion or preservation. Yang style Tai Chi was the most popular, and Tai Chi was frequently practiced two to three 1-hour sessions per week for 12 weeks. Tai Chi was used alone in more than half of the studies (58.6%), while in other studies Tai Chi was applied in combination with other therapies including medications, health education and other physical therapies. The majority of studies (94.1%) reported positive effects of Tai Chi, 5.1% studies reported uncertain effects and 0.8% studies reported negative effects. No serious adverse events related to Tai Chi were reported. CONCLUSIONS: The quantity and evidence base of clinical studies on Tai Chi is substantial. However, there is a wide variation in Tai Chi intervention studied and the reporting of Tai Chi intervention needs to be improved. Further well-designed and reported studies are recommended to confirm the effects of Tai Chi for the frequently reported diseases/conditions.


Subject(s)
Bibliometrics , Tai Ji , Evidence-Based Medicine , Female , Humans , Male , Treatment Outcome
19.
J Hazard Mater ; 274: 465-72, 2014 Jun 15.
Article in English | MEDLINE | ID: mdl-24813666

ABSTRACT

The electrocoagulation (EC) process was used to pretreat wastewater from the manufacture of wet-spun acrylic fibers, and the effects of varying the operating parameters, including the electrode area/wastewater volume (A/V) ratio, current density, interelectrode distance and pH, on the EC treatment process were investigated. About 44% of the total organic carbon was removed using the optimal conditions in a 100 min procedure. The optimal conditions were a current density of 35.7 mA cm(-2), an A/V ratio of 0.28 cm(-1), a pH of 5, and an interelectrode distance of 0.8 cm. The biodegradability of the contaminants in the treated water was improved by the EC treatment (using the optimal conditions), increasing the five-day biological oxygen demand/chemical oxygen demand ratio to 0.35, which could improve the effectiveness of subsequent biological treatments. The improvement in the biodegradability of the contaminants in the wastewater was attributed to the removal and degradation of aromatic organic compounds, straight-chain paraffins, and other organic compounds, which we identified using gas chromatography-mass spectrometry and Fourier transform infrared spectroscopy. The EC process was proven to be an effective alternative pretreatment for wastewater from the manufacture of wet-spun acrylic fibers, prior to biological treatments.


Subject(s)
Acrylic Resins , Industrial Waste , Textiles , Waste Disposal, Fluid/methods , Biodegradation, Environmental , Biological Oxygen Demand Analysis , Electrochemical Techniques , Electrodes , Hydrogen-Ion Concentration , Wastewater , Water Pollutants, Chemical/metabolism
20.
Wei Sheng Wu Xue Bao ; 51(3): 313-9, 2011 Mar.
Article in Chinese | MEDLINE | ID: mdl-21604545

ABSTRACT

OBJECTIVE: The aim of this study was to isolate high-molecular-weight polycyclic aromatic hydrocarbons (HMW-PAHs) degrading bacterial strains, and to study their degradation potential. METHODS: We used sublimation method to enrich and isolate the degrading bacteria from coking plant samples. Morphological properties, the sequence homology of 16S rRNA and gyrb genes were used to identify the isolated strains. GC-MS was used to analyze the degradation potential against some HMW-PAHs. RESULTS: An HMW-PAHs degrading bacterium,HBS1, was obtained. HBS1 could use several HMW-PAHs such as pyrene, benzoanthracene, benzopyrene, chyrsene, indeno[ 1,2,3-cd] pyrene, benzo[g,h,i]perylene and fluoranthene as sole carbon source for growth. HBS1 was identified as Gordonia sp., based on the high sequence similarities (more than 99%) of both 16S rRNA gene and gyrb gene to those of Gordonia amicalis. When the initial concentration of pyrene was 50 mg/L, HBS1 could consume 97% of the pyrene in 17 days. One fragment of the dioxygenase gene was obtained by PCR with size about 300 bp, which was closest to the counterpart from Mycobacterium sp. with 93.8% similarity. CONCLUSION: We isolated a strain HBS1 from seriously PAHs-polluted soils and identified as a Gordonia sp. The isolate had the degradation potential of high-molecular weight polycyclic aromatic hydrocarbons.


Subject(s)
Environmental Pollutants/metabolism , Gordonia Bacterium/isolation & purification , Gordonia Bacterium/metabolism , Pyrenes/metabolism , Soil Microbiology , DNA Gyrase/genetics , Gordonia Bacterium/genetics , Polycyclic Aromatic Hydrocarbons/metabolism , RNA, Ribosomal, 16S/genetics
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