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1.
Bioorg Med Chem Lett ; 26(6): 1550-1553, 2016 Mar 15.
Article in English | MEDLINE | ID: mdl-26876932

ABSTRACT

Transglycosylation reactions biocatalyzed by the native arabinofuranosidase Araf51 and using d-galactosyl, d-fucosyl and 6-deoxy-6-fluoro-D-galactosyl derivatives as donors and acceptors provided di-to pentahexofuranosides. The immunostimulatory potency of these compounds, and more especially their ability to induce production of TNF-α, was evaluated on the murine macrophage cell line, Raw 264.7. The results obtained showed concentration-dependent and most importantly, structure-dependent responses. Interestingly, oligoarabinofuranosides belonging to the oligopentafuranoside family displayed concentration-, chain length and aglycon-dependent bioactivities irrespective of their fine chemical variations. Thus, neo-oligofuranosides in D-Galf series, as well as their D-Fucf and 6-fluorinated counterparts are indeed potential sources of immunostimulating agents.


Subject(s)
Biocatalysis , Disaccharides/biosynthesis , Disaccharides/pharmacology , Tumor Necrosis Factor-alpha/biosynthesis , Animals , Carbohydrate Conformation , Cell Line , Disaccharides/chemistry , Disaccharides/immunology , Mice
2.
Org Biomol Chem ; 12(19): 3080-9, 2014 May 21.
Article in English | MEDLINE | ID: mdl-24700171

ABSTRACT

The preparation of galactofuranosyl-containing disaccharidic parts of natural glycoconjugates was performed according to a chemo-enzymatic synthesis. Our goals were firstly to develop an alternative approach to standard chemical strategies by limiting the number of reaction and purification steps, and secondly to evaluate the scope of the Araf51 biocatalyst to transfer a galactofuranosyl moiety to a set of pyranosidic acceptors differing from each other by the series, the anomeric configuration as well as the conformation. The study of binding mode of the resulting disaccharides was also performed by molecular modeling and showed significant differences between (1→2)- and (1→6)-linked disaccharides.


Subject(s)
Disaccharides/biosynthesis , Glycoside Hydrolases/metabolism , Biocatalysis , Disaccharides/chemistry , Molecular Dynamics Simulation , Stereoisomerism
3.
Carbohydr Res ; 356: 44-61, 2012 Jul 15.
Article in English | MEDLINE | ID: mdl-22554502

ABSTRACT

There is no doubt now that the synthesis of compounds of varying complexity such as saccharides and derivatives thereof continuously grows with enzymatic methods. This review focuses on recent basic knowledge on enzymes specifically involved in the biosynthesis and degradation of furanosyl-containing polysaccharides and conjugates. Moreover, and when possible, biocatalyzed approaches, alternative to standard synthesis, will be detailed in order to strengthen the high potential of these biocatalysts to go further with the preparation of rare furanosides. Interesting results will be also proposed with chemo-enzymatic processes based on nonfuranosyl-specific enzymes.


Subject(s)
Bacterial Proteins/metabolism , Fungal Proteins/metabolism , Glycoconjugates/biosynthesis , Monosaccharides/biosynthesis , Polysaccharides/biosynthesis , Bacterial Proteins/chemistry , Biocatalysis , Carbohydrate Sequence , Fungal Proteins/chemistry , Galactose/analogs & derivatives , Galactose/chemistry , Galactose/metabolism , Glycoconjugates/chemical synthesis , Glycoside Hydrolases/chemistry , Glycoside Hydrolases/metabolism , Glycosyltransferases/chemistry , Glycosyltransferases/metabolism , Intramolecular Transferases/chemistry , Intramolecular Transferases/metabolism , Lipase/chemistry , Lipase/metabolism , Molecular Sequence Data , Monosaccharides/chemical synthesis , Polysaccharides/chemical synthesis , Uridine Diphosphate/analogs & derivatives , Uridine Diphosphate/chemistry , Uridine Diphosphate/metabolism
5.
Org Biomol Chem ; 8(9): 2092-102, 2010 May 07.
Article in English | MEDLINE | ID: mdl-20401386

ABSTRACT

D-Galactofuranosyl-containing conjugates are ubiquitous in many pathogenic microorganisms, but completely absent from mammals. As they may constitute interesting pharmacophores, recent works have been dedicated to their preparation. Besides well-reported chemical procedures, enzymatic approaches are still limited, mainly due to the lack of the corresponding biocatalysts. Based on the similarity between chemical structures, the arabinofuranosyl hydrolase Araf51 from Clostridium thermocellum was expected to recognize both the L-Araf motif and its D-Galf analogue. Molecular dynamics and STD-NMR were firstly used to confirm this hypothesis and increase our knowledge of the active site. Interestingly, this arabinofuranosidase was not only able to hydrolyze galactosyl derivatives, but was also really efficient in catalyzing oligomerisations using p-nitrophenyl furanosides as donors. The structures of the products obtained were determined using mass spectrometry and NMR. Amongst them, all the possible regioisomers of di-arabino and -galactofuranosides were synthesized, and the ratio of each regioisomer was easily tuned with respect to the reaction time. Especially, the galactofuranobioside displaying the biologically relevant sequence beta-D-Galf-(1,6)-beta-D-Galf was enzymatically prepared for the first time. All fractions going from di- to penta-arabino- and galactofuranosides were tested for their ability in eliciting the production of TNF-alpha. Interesting immunological properties were observed with arabinofuranosides as short as three sugar residues.


Subject(s)
Adjuvants, Immunologic/chemical synthesis , Arabinose/chemical synthesis , Galactosides/chemical synthesis , Glycoside Hydrolases/metabolism , Molecular Dynamics Simulation , Adjuvants, Immunologic/chemistry , Arabinose/analogs & derivatives , Arabinose/chemistry , Biocatalysis , Carbohydrate Conformation , Carbohydrate Sequence , Galactosides/chemistry , Glycoside Hydrolases/chemistry , Kinetics , Molecular Sequence Data
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