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1.
Res Sq ; 2024 Feb 23.
Article in English | MEDLINE | ID: mdl-38464213

ABSTRACT

Curvature is a critical factor in cornea mechanobiology, but its impact on phenotypic alterations and extracellular matrix remodeling of cornea stroma remains unclear. In this work, we investigated how curvature influences the corneal stroma using a hydraulically controlled curvature array chip. The responses of stromal cells to low, medium, and high curvatures were observed by preparing three phenotypes of corneal stromal cells: corneal keratocytes, fibroblasts, and myofibroblasts. Keratocytes exhibited phenotypic alterations in response to curvature changes, notably including a decrease in ALDH3 expression and an increase in α-SMA expression. For focal adhesion, corneal fibroblast and myofibroblasts showed enhanced vinculin localization in response to curvature, while corneal keratocytes presented reduced vinculin expression. For cell alignment and ECM expression, most stromal cells under all curvatures showed a radially organized f-actin and collagen fibrils. Interestingly, for corneal fibroblast under medium curvature, we observed orthogonal cell alignment, which is linked to the unique hoop and meridional stress profiles of the curved surface. Furthermore, lumican expression was upregulated in corneal keratocytes, and keratocan expression was increased in corneal fibroblasts and myofibroblasts due to curvature. These results demonstrate that curvature influences both the phenotype of corneal stromal cells and the structural organization of corneal stroma tissue without any external stimuli. This curvature-dependent behavior of corneal stromal cells presents potential opportunities for creating therapeutic strategies for corneal shape dysfunctions.

2.
J Sleep Res ; 28(5): e12757, 2019 10.
Article in English | MEDLINE | ID: mdl-30252172

ABSTRACT

While the association between sleep-related breathing disorders such as snoring and hypertension has been well established, it still remains unclear whether the association differs by age and gender. Therefore, in this 14-year follow-up study, we examined the independent association between self-reported snoring and the incidence of hypertension by gender and age groups in a large cohort of Korean adults. A total of 4,954 adults, aged 40-69 years, free of hypertension at baseline were enrolled. Participants were divided into three groups based on a self-reported snoring frequency: never; occasional (snoring <4 nights per week); and habitual snorer (snoring ≥4 nights). At baseline and biennial follow-up visits, blood pressure was measured by trained examiners. Incident hypertension was defined as the first occurrence at any follow-up examination where the participants had blood pressure ≥140/90 mmHg or were being treated with antihypertensive medication. After adjusting for known cardiovascular risk factors, only in men aged ≤45 years was habitual snoring significantly associated with a 1.5 times higher risk for incident hypertension than never snoring. In this age group, habitual snoring was significantly associated with increased risk for the development of hypertension, regardless of the presence of excessive daytime sleepiness. In women, snoring was not significantly associated with hypertension incidence in any age group. The present study suggests that young male snorers may be at high risk for the future development of hypertension, which has important clinical implications for early detection and treatment of snoring to reduce the burden of cardiovascular disease.


Subject(s)
Hypertension/etiology , Snoring/complications , Adult , Aged , Follow-Up Studies , Humans , Incidence , Male , Middle Aged , Risk Factors , Snoring/physiopathology , Time Factors
3.
BMC Med Genomics ; 11(Suppl 2): 25, 2018 04 20.
Article in English | MEDLINE | ID: mdl-29697367

ABSTRACT

BACKGROUND: The Cancer Genome Atlas (TCGA) project is a public resource that provides transcriptomic, DNA sequence, methylation, and clinical data for 33 cancer types. Transforming the large size and high complexity of TCGA cancer genome data into integrated knowledge can be useful to promote cancer research. Alternative splicing (AS) is a key regulatory mechanism of genes in human cancer development and in the interaction with epigenetic factors. Therefore, AS-guided integration of existing TCGA data sets will make it easier to gain insight into the genetic architecture of cancer risk and related outcomes. There are already existing tools analyzing and visualizing alternative mRNA splicing patterns for large-scale RNA-seq experiments. However, these existing web-based tools are limited to the analysis of individual TCGA data sets at a time, such as only transcriptomic information. RESULTS: We implemented CAS-viewer (integrative analysis of Cancer genome data based on Alternative Splicing), a web-based tool leveraging multi-cancer omics data from TCGA. It illustrates alternative mRNA splicing patterns along with methylation, miRNAs, and SNPs, and then provides an analysis tool to link differential transcript expression ratio to methylation, miRNA, and splicing regulatory elements for 33 cancer types. Moreover, one can analyze AS patterns with clinical data to identify potential transcripts associated with different survival outcome for each cancer. CONCLUSIONS: CAS-viewer is a web-based application for transcript isoform-driven integration of multi-omics data in multiple cancer types and will aid in the visualization and possible discovery of biomarkers for cancer by integrating multi-omics data from TCGA.


Subject(s)
Genomics/methods , Internet , Neoplasms/genetics , RNA Splicing , Humans , Polymorphism, Single Nucleotide , Software , Urinary Bladder Neoplasms/genetics
4.
Langmuir ; 20(14): 5870-8, 2004 Jul 06.
Article in English | MEDLINE | ID: mdl-16459603

ABSTRACT

Time-resolved adsorption behavior of a human immunoglobin G (hIgG) protein on a hydrophobized gold surface is investigated using multitechniques: quartz crystal microbalance/dissipation (QCM-D) technique; combined surface plasmon resonance (SPR) and Love mode surface acoustic wave (SAW) technique; combined QCM-D and atomic force microscopy (AFM) technique. The adsorbed hIgG forms interfacial structures varying in organization from a submonolayer to a multilayer. An "end-on" IgG orientation in the monolayer film, associated with the surface coverage results, does not corroborate with the effective protein thickness determined from SPR/SAW measurements. This inconsistence is interpreted by a deformation effect induced by conformation change. This conformation change is confirmed by QCM-D measurement. Combined SPR/SAW measurements suggest that the adsorbed protein barely contains water after extended contact with the hydrophobic surface. This limited interfacial hydration also contributed to a continuous conformation change in the adsorbed protein layer. The viscoelastic variation associated with interfacial conformation changes induces about 1.5 times overestimation of the mass uptake in the QCM-D measurements. The merit of combined multitechnique measurements is demonstrated.


Subject(s)
Immunoglobulin G/chemistry , Microscopy, Atomic Force/methods , Quartz/chemistry , Surface Plasmon Resonance/methods , Adsorption , Crystallization , Gold/chemistry , Humans , Hydrophobic and Hydrophilic Interactions , Kinetics , Sensitivity and Specificity , Surface Properties , Time Factors , Water/chemistry
5.
Anal Chem ; 75(24): 6894-900, 2003 Dec 15.
Article in English | MEDLINE | ID: mdl-14670050

ABSTRACT

The absorption spectrum of noble metal spherical nanoparticles is known to be strongly influenced by the dielectric constant of the surrounding material, and as such, these particles are well suited for biosensing applications. To perform biosensing using nanoparticles on a substrate, the metal particles are covalently attached onto quartz using an organic adhesion layer of mercaptosilanes. The particles in solution are characterized by UV-vis spectroscopy and transmission electron microscopy, while those attached to the quartz are characterized with UV-vis spectroscopy and atomic force microscopy. Antibodies are attached to the metal nanoparticles, and the antigen recognition is monitored via the change of light absorption when this binding event occurs. Not only is the absorbance originating from plasmon resonances of the particles influenced by the dielectric properties of molecules attached to the nanospheres but also the interband absorption of the particles changes, which will be demonstrated in this report. A light absorption change is detected when a molecular recognition occurs between the bioreceptor molecules attached to the nanoparticle and a biomolecular counterpart. This change in absorption can be very large when adhered molecules are at resonance (interband transitions). In addition, the presented type of biosensing can be a cost-effective and easy to use alternative to conventional biosensing techniques.

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