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1.
Arch Microbiol ; 202(6): 1341-1347, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32152645

ABSTRACT

A new bacterium, designated DCY113T, was isolated from ginseng cultivation soil in Gochang-gun, South Korea, and its taxonomic position identified by the polyphasic approach. 16S rRNA gene sequence analysis determined that this isolate belongs to the genus Paraburkholderia, and was closest to P. dipogonis DL7T (98.6%), P. phytofirmans PsJNT (98.5%), P. kirstenboschensis Kb15T (98.4%) and P. aromaticivorans BNT (98.1%). Strain DCY113T is Gram-reaction negative, strictly aerobic, rod-shaped, non-motile, and catalase and oxidase positive. The predominant isoprenoid quinone of DCY113T was ubiquinone Q-8. The major cellular fatty acids were C16:0, cyclo-C17:0 and the Summed feature 8 (C18:1ω7c and/or C18:1ω6c). The major polar lipids were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), and an unknown amino lipid (AL1). The G+C content of the genomic DNA was 62.2 mol%. Average nucleotide identity (ANI) between strain DCY113T and the related Paraburkholderia type strains were below the threshold value for species delineation. This low DNA relatedness in combination with phylogenetic and phenotypic tests indicates that strain DCY113T cannot be assigned to any recognized species. Strain DCY113T was also found to have antifungal activity against the pathogenic fungi Cylindrocarpon destructans. In conclusion, this study found DCY113T to be a novel species within the genus Paraburkholderia, for which the name P. panacisoli is proposed. The type strain is DCY113T (= KCTC 52951T = JCM 32098T).


Subject(s)
Antibiosis , Burkholderiaceae/classification , Burkholderiaceae/physiology , Hypocreales/physiology , Panax/microbiology , Soil Microbiology , Bacterial Typing Techniques , Base Composition , Burkholderiaceae/genetics , DNA, Bacterial/genetics , Fatty Acids/analysis , Phylogeny , RNA, Ribosomal, 16S/genetics , Species Specificity
2.
Arch Microbiol ; 200(7): 1049-1055, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29679163

ABSTRACT

A novel bacterium, designated DCY114T, was isolated from ginseng-cultivated soil in Gochang-gun, Republic of Korea. This isolate was assigned to the genus Paenibacillus and is closely related to Paenibacillus amylolyticus NRRL NRS-290T (98.3%), P. dongdonensis KUDC0114T (98.0%), P. tylopili MK2T (97.9%), P. tundrae A10bT (97.8%), and P. xylanexedens B22aT (97.5%) based on 16S rRNA gene sequence analysis. Strain DCY114T is a Gram-reaction positive, catalase and oxidase positive, facultatively aerobic rod that is motile by peritrichous flagella. Strain DCY114T produces siderophores and indole-3-acetic acid (IAA) and is able to solubilize phosphate as a plant growth-promoting bacterium. MK-7 was the diagnostic menaquinone. The major cellular fatty acids were anteiso-C15:0, C16:0, and C18:0, and the major polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), and an unknown amino lipid (AL1,2). The genomic DNA G + C content was 46.0 mol%. Phenotypic and chemotaxonomic results also placed strain DCY114T within the genus Paenibacillus. DNA-DNA homology values between strain DCY114T and closely related reference strains were lower than 43%. The low DNA relatedness data in combination with phylogenetic and biochemical tests indicated that strain DCY114T could not be assigned to a recognized species. The results of this study support that the DCY114T strain is a novel species belonging to the genus Paenibacillus, for which the name Paenibacillus panacihumi is proposed. The type strain is DCY114T (= KCTC 33915T = JCM 32073T).


Subject(s)
Paenibacillus/isolation & purification , Panax/growth & development , Soil Microbiology , Bacterial Typing Techniques , Base Composition , DNA, Bacterial/genetics , Fatty Acids/metabolism , Paenibacillus/classification , Paenibacillus/genetics , Paenibacillus/metabolism , Panax/microbiology , Phylogeny , RNA, Ribosomal, 16S/genetics , Republic of Korea , Sequence Analysis, DNA
3.
Artif Cells Nanomed Biotechnol ; 46(1): 108-117, 2018 Feb.
Article in English | MEDLINE | ID: mdl-28290213

ABSTRACT

Gold (FA-AuNps) and silver (FA-AgNps) nanoparticles were synthesized at room temperature by aqueous extract of dried fruits of Amomum villosum, also known as Fructus Amomi (cardamom), in order to confer antioxidant, catalytic, antimicrobial activities and treatment effect against breast cancer cells. Fruit extracts served as both reducing agents and stabilizers in lieu of chemical agents. Ultra-violet visible (UV-Vis) spectroscopy, field emission transmission electron microscopy (FE-TEM), energy-dispersive X-ray (EDX) spectroscopy, elemental mapping, X-ray powder diffraction (XRD), selected area electron diffraction (SAED), dynamic light scattering (DLS) and Fourier transform infrared (FTIR) spectroscopy were employed to characterize the biosynthesized nanoparticles. Both FA-AuNps and FA-AgNps exhibited free radical scavenging activity against 2,2-diphenyl-1-picrylhydrzyl (DPPH). Additionally, biosynthesized nanoparticles successfully reduced methylene blue, a well-known redox indicator. FA-AgNps showed zones of inhibition against pathogenic Staphylococcus aureus and Escherichia coli. Finally, the biological activities and cytotoxicity of nanoparticles were subsequently investigated in vitro. FA-AuNps demonstrated a potential cytotoxic agent against breast cancer cells as evaluated by MTT assay. The study highlights a rapid synthesis of FA-AuNps and FA-AgNps by dried Fructus Amomi aqueous extract and evaluates their potential biological applications on medical platforms.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/pharmacology , Elettaria/chemistry , Fruit/chemistry , Gold/chemistry , Metal Nanoparticles/chemistry , Silver/chemistry , Animals , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/toxicity , Biphenyl Compounds/chemistry , Chemistry Techniques, Synthetic , Escherichia coli/drug effects , Green Chemistry Technology , Humans , MCF-7 Cells , Mice , Particle Size , Picrates/chemistry , RAW 264.7 Cells , Staphylococcus aureus/drug effects
4.
Artif Cells Nanomed Biotechnol ; 46(2): 303-312, 2018 Mar.
Article in English | MEDLINE | ID: mdl-28375686

ABSTRACT

The current study highlights the rapid biosynthesis of gold nanoparticles (Gu-AuNps) and silver chloride nanoparticles (Gu-AgClNps) by aqueous root extract of Glycyrrhiza uralensis, a medicinal plant. G. uralensis has been reported for anticancer and hepatoprotective effects. The reduction of chloroauric acid and silver nitrate by the Glycyrrhiza root extract prompted the formation of Gu-AuNps and Gu-AgClNps within 4 and 40 min at 80 °C, respectively. The complete reaction did not require supplemental reducing and stabilizing agents, which demonstrated green synthesis. Field emission transmission electron microscopy (FE-TEM) revealed the spherical shape of Gu-AuNps and Gu-AgClNps. X-ray diffraction (XRD) showed face-centred cubic structure of Gu-AuNps and Gu-AgClNps with average crystallite size 12.25 nm and 8.01 nm, respectively. The biosynthesized Gu-AgClNps served as competent antimicrobial agent against Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa and Salmonella enterica. Additionally, Gu-AuNps and Gu-AgClNps were analyzed for their catalytic ability to reduce methylene blue as model test pollutant. Likewise, both nanoparticles possessed free radical scavenging activity against 2,2-diphenyl-1-picrylhydrzyl (DPPH). Moreover, in vitro cytotoxicity in murine macrophage (RAW264.7) and human breast cancer (MCF7) cells were evaluated. Thus, the study proposes a green synthesis of Gu-AuNps and Gu-AgClNps by G. uralensis extract and in vitro biological applications. [Formula: see text].


Subject(s)
Glycyrrhiza uralensis/chemistry , Gold/chemistry , Gold/pharmacology , Metal Nanoparticles/chemistry , Nanotechnology , Plant Extracts/chemistry , Silver Compounds/chemistry , Animals , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Antioxidants/chemical synthesis , Antioxidants/chemistry , Antioxidants/pharmacology , Catalysis , Chemistry Techniques, Synthetic , Green Chemistry Technology , Humans , MCF-7 Cells , Mice , RAW 264.7 Cells
5.
Artif Cells Nanomed Biotechnol ; 46(8): 1530-1540, 2018 Dec.
Article in English | MEDLINE | ID: mdl-28918663

ABSTRACT

This research article investigates the one-pot synthesis of gold and silver chloride nanoparticles functionalized by fruit extract of Crataegus pinnatifida as reducing and stabilizing agents and their possible roles as novel anti-inflammatory agents. Hawthorn (C. pinnatifida) fruits are increasingly popular as raw materials for functional foods and anti-inflammatory potential agents because of abundant flavonoids. The reduction of auric chloride and silver nitrate by the aqueous fruit extract led to the formation of gold and silver chloride nanoparticles. The nanoparticles were further characterized by field emission transmission electron microscopy indicated that CP-AuNps and CP-AgClNps were hexagonal and cubic shape, respectively. According to X-ray diffraction results, the average crystallite sizes of CP-AuNps and CP-AgClNps were 14.20 nm and 24.80 nm. The biosynthesized CP-AgClNps served as efficient antimicrobial agents against Escherichia coli and Staphylococcus aureus. Furthermore, CP-AuNps and CP-AgClNps enhanced the DPPH radical scavenging activity of the fruit extract. Lastly, MTT assay of nanoparticles demonstrated low toxicity in murine macrophage (RAW264.7). Biosynthesized nanoparticles also reduced the production of the inflammatory cytokines including nitric oxide and prostaglandin E2 in lipopolysaccharide-induced RAW264.7 cells. Altogether, these findings suggest that CP-AuNps and CP-AgClNps can be used as novel drug carriers or biosensors with intrinsic anti-inflammatory activity.


Subject(s)
Anti-Inflammatory Agents , Crataegus/chemistry , Fruit/chemistry , Gold , Nanoparticles/chemistry , Plant Extracts/chemistry , Silver Compounds , Animals , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/pharmacology , Escherichia coli/growth & development , Gold/chemistry , Gold/pharmacology , Mice , RAW 264.7 Cells , Silver Compounds/chemistry , Silver Compounds/pharmacology , Staphylococcus aureus/growth & development
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