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1.
PLoS One ; 12(11): e0184183, 2017.
Article in English | MEDLINE | ID: mdl-29112947

ABSTRACT

Carbon-carbon bond formation is one of the most challenging reactions in synthetic organic chemistry, and aldol reactions catalysed by dihydroxyacetone phosphate-dependent aldolases provide a powerful biocatalytic tool for combining C-C bond formation with the generation of two new stereo-centres, with access to all four possible stereoisomers of a compound. Dihydroxyacetone phosphate (DHAP) is unstable so the provision of DHAP for DHAP-dependent aldolases in biocatalytic processes remains complicated. Our research has investigated the efficiency of several different enzymatic cascades for the conversion of glycerol to DHAP, including characterising new candidate enzymes for some of the reaction steps. The most efficient cascade for DHAP production, comprising a one-pot four-enzyme reaction with glycerol kinase, acetate kinase, glycerophosphate oxidase and catalase, was coupled with a DHAP-dependent fructose-1,6-biphosphate aldolase enzyme to demonstrate the production of several rare chiral sugars. The limitation of batch biocatalysis for these reactions and the potential for improvement using kinetic modelling and flow biocatalysis systems is discussed.


Subject(s)
Acetate Kinase/metabolism , Catalase/metabolism , Dihydroxyacetone Phosphate/metabolism , Glycerol Kinase/metabolism , Glycerolphosphate Dehydrogenase/metabolism , Sugars/chemical synthesis , Biocatalysis , Chromatography, High Pressure Liquid , Stereoisomerism , Sugars/chemistry
2.
ACS Chem Neurosci ; 8(3): 629-637, 2017 03 15.
Article in English | MEDLINE | ID: mdl-27958708

ABSTRACT

The metal ions of iron, copper, and zinc have long been associated with the aggregation of ß-amyloid (Aß) plaques in Alzheimer's disease; an interaction that has been suggested to promote increased oxidative stress and neuronal dysfunction. We examined plaque metal load in the hippocampus of APP/PS1 mice using X-ray fluorescence microscopy to assess how the anatomical location of Aß plaques was influenced by the metal content of surrounding tissue. Immunohistochemical staining of Aß plaques colocalized with areas of increased X-ray scattering power in unstained tissue sections, allowing direct X-ray based-assessment of plaque metal levels in sections subjected to minimal chemical fixation. We identified and mapped 48 individual plaques in four subregions of the hippocampus from four biological replicates. Iron, Cu, and Zn areal concentrations (ng cm-2) were increased in plaques compared to the surrounding neuropil. However, this elevation in metal load reflected the local metal makeup of the surrounding neuropil, where different brain regions are enriched for different metal ions. After correcting for tissue density, only Zn levels remained elevated in plaques. This study suggests that the in vivo binding of Zn to plaques is not simply due to increased protein deposition.


Subject(s)
Alzheimer Disease/pathology , Brain/pathology , Copper/chemistry , Iron/chemistry , Neuropil/chemistry , Zinc/chemistry , Alzheimer Disease/genetics , Amyloid beta-Peptides/metabolism , Amyloid beta-Protein Precursor/genetics , Animals , Disease Models, Animal , Humans , Metals/chemistry , Mice , Mice, Transgenic , Mutation/genetics , Plaque, Amyloid/metabolism , Presenilin-1/genetics , X-Rays
3.
Nat Commun ; 7: 11007, 2016 Mar 15.
Article in English | MEDLINE | ID: mdl-26975966

ABSTRACT

The inherent disadvantages of using granulocyte colony-stimulating factor (G-CSF) for hematopoietic stem cell (HSC) mobilization have driven efforts to identify alternate strategies based on single doses of small molecules. Here, we show targeting α9ß1/α4ß1 integrins with a single dose of a small molecule antagonist (BOP (N-(benzenesulfonyl)-L-prolyl-L-O-(1-pyrrolidinylcarbonyl)tyrosine)) rapidly mobilizes long-term multi-lineage reconstituting HSC. Synergistic engraftment augmentation is observed when BOP is co-administered with AMD3100. Impressively, HSC in equal volumes of peripheral blood (PB) mobilized with this combination effectively out-competes PB mobilized with G-CSF. The enhanced mobilization observed using BOP and AMD3100 is recapitulated in a humanized NODSCIDIL2Rγ(-/-) model, demonstrated by a significant increase in PB CD34(+) cells. Using a related fluorescent analogue of BOP (R-BC154), we show that this class of antagonists preferentially bind human and mouse HSC and progenitors via endogenously primed/activated α9ß1/α4ß1 within the endosteal niche. These results support using dual α9ß1/α4ß1 inhibitors as effective, rapid and transient mobilization agents with promising clinical applications.


Subject(s)
Dipeptides/pharmacology , Hematopoietic Stem Cell Mobilization/methods , Hematopoietic Stem Cells/drug effects , Heterocyclic Compounds/pharmacology , Integrin alpha4beta1/antagonists & inhibitors , Integrins/antagonists & inhibitors , Rhodamines/pharmacology , Sulfones/pharmacology , Animals , Benzylamines , Cyclams , Humans , Interleukin Receptor Common gamma Subunit/genetics , Mice , Mice, Inbred NOD , Mice, Knockout , Mice, SCID , Receptors, CXCR4/antagonists & inhibitors
4.
J Org Chem ; 80(20): 9831-7, 2015 Oct 16.
Article in English | MEDLINE | ID: mdl-26394038

ABSTRACT

Total synthesis of the highly functionalized cyclic peptide natural product, ustiloxin D, has been achieved in a convergent manner. Our strategy incorporates an asymmetric allylic alkylation to construct the tert-alkyl aryl ether linkage between the dopa and isoleucine residues. The elaborated ß-hydroxydopa derivative is rapidly converted to a linear tripeptide through an ammonia-Ugi reaction. Subsequent cyclization and global deprotection affords ustiloxin D in six steps from a known ß-hydroxydopa derivative.


Subject(s)
Aldehydes/chemistry , Ammonia/chemistry , Peptides, Cyclic/chemical synthesis , Alkylation , Molecular Conformation , Peptides, Cyclic/chemistry
5.
J Org Chem ; 80(11): 5428-35, 2015 Jun 05.
Article in English | MEDLINE | ID: mdl-25993092

ABSTRACT

We have developed a general protocol for the interconversion of diverse protected boronic acids, via intermediate organotrifluoroborates. N-Methyliminodiacetyl boronates, which have been hitherto resistant to direct conversion to trifluoroborates, have been shown to undergo fluorolysis at elevated temperatures. Subsequent solvolysis of organotrifluoroborates in the presence of trimethylsilyl chloride and a wide range of bis-nucleophiles enables the generation of a variety of protected boronic acids.

6.
Bioorg Med Chem Lett ; 24(14): 3108-12, 2014 Jul 15.
Article in English | MEDLINE | ID: mdl-24878198

ABSTRACT

Alzheimer's disease is the most common neurodegenerative disease and is one of the main causes of death in developed countries. Consumption of foods rich in polyphenolics is strongly correlated with reduced incidence of Alzheimer's disease. Our study has investigated the biological activity of previously untested polyphenolic compounds in preventing amyloid ß aggregation. The anti-aggregatory potential of these compounds was assessed using the Thioflavin-T assay, transmission electron microscopy, dynamic light scattering and size exclusion chromatography. Two structurally related compounds, luteolin and transilitin were identified as potent inhibitors of Aß fibril formation. Computational docking studies with an X-ray derived oligomeric structure offer a rationale for the inhibitory activity observed and may facilitate development of improved inhibitors of Aß aggregation and toxicity.


Subject(s)
Amyloid beta-Peptides/metabolism , Peptide Fragments/metabolism , Polyphenols/pharmacology , Protein Aggregates/drug effects , Crystallography, X-Ray , Dose-Response Relationship, Drug , Humans , Models, Molecular , Molecular Structure , Polyphenols/chemistry , Polyphenols/isolation & purification , Protein Aggregation, Pathological/prevention & control , Structure-Activity Relationship
8.
Chem Commun (Camb) ; 49(58): 6552-4, 2013 Jul 25.
Article in English | MEDLINE | ID: mdl-23770756

ABSTRACT

Light-initiated, radical and hydrogen-bond induced self-assembly of bis-acetamido-functionalized triarylamines is demonstrated to occur in strongly dipolar "push-pull" molecules. This self-assembly process results in the formation of self-assembled nanostructures which in turn increase the efficiency of organic photovoltaic devices.


Subject(s)
Amines/chemistry , Electrochemistry , Hydrogen Bonding , Light , Optical Phenomena , Photochemical Processes
9.
Org Lett ; 13(11): 2900-3, 2011 Jun 03.
Article in English | MEDLINE | ID: mdl-21561144

ABSTRACT

Petasis reactions of substituted styrenylboronic acids and glyoxylic acid, employing tert-butylsulfinamide as the 'amine' component, proceed with high stereoselectivity to produce ß,γ-dehydrohomoarylalanine derivatives. Subsequent asymmetric dihydroxylation under neutral conditions gives the corresponding protected ß,γ-dihydroxyhomoarylalanines with up to 15:1 dr. The method has been exploited in the efficient, stereoselective synthesis of protected ß,γ-dihydroxyhomotyrosine, a component of the antifungal cyclic peptide echinocandin B.


Subject(s)
Antifungal Agents/chemical synthesis , Echinocandins/chemical synthesis , Fungal Proteins/chemical synthesis , Glyoxylates/chemistry , Tyrosine/analogs & derivatives , Antifungal Agents/chemistry , Echinocandins/chemistry , Fungal Proteins/chemistry , Molecular Structure , Stereoisomerism , Tyrosine/chemical synthesis , Tyrosine/chemistry
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