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1.
Blood ; 141(13): 1597-1609, 2023 03 30.
Article in English | MEDLINE | ID: mdl-36315912

ABSTRACT

T-cell acute lymphoblastic leukemia (T-ALL) is a T-cell malignancy characterized by cell subsets and enriched with leukemia-initiating cells (LICs). ß-Catenin modulates LIC activity in T-ALL. However, its role in maintaining established leukemia stem cells remains largely unknown. To identify functionally relevant protein interactions of ß-catenin in T-ALL, we performed coimmunoprecipitation followed by liquid chromatography-mass spectrometry. Here, we report that a noncanonical functional interaction of ß-catenin with the Forkhead box O3 (FOXO3) transcription factor positively regulates LIC-related genes, including the cyclin-dependent kinase 4, which is a crucial modulator of cell cycle and tumor maintenance. We also confirm the relevance of these findings using stably integrated fluorescent reporters of ß-catenin and FOXO3 activity in patient-derived xenografts, which identify minor subpopulations with enriched LIC activity. In addition, gene expression data at the single-cell level of leukemic cells of primary patients at the time of diagnosis and minimal residual disease (MRD) up to 30 days after the standard treatments reveal that the expression of ß-catenin- and FOXO3-dependent genes is present in the CD82+CD117+ cell fraction, which is substantially enriched with LICs in MRD as well as in early T-cell precursor ALL. These findings highlight key functional roles for ß-catenin and FOXO3 and suggest novel therapeutic strategies to eradicate aggressive cell subsets in T-ALL.


Subject(s)
Leukemia, Myeloid, Acute , Precursor T-Cell Lymphoblastic Leukemia-Lymphoma , beta Catenin , Humans , beta Catenin/metabolism , Leukemia, Myeloid, Acute/pathology , Precursor T-Cell Lymphoblastic Leukemia-Lymphoma/pathology
2.
Cytometry B Clin Cytom ; 98(3): 216-225, 2020 05.
Article in English | MEDLINE | ID: mdl-31697027

ABSTRACT

BACKGROUND: The assessment of minimal residual disease (MRD) by flow cytometry (FC) has a prognostic impact in acute myeloid leukemia (AML), despite the low sensitivity in predicting relapse. Nonetheless, the role of leukemic-associated immunophenotypes (LAIPs)-related specificity on the sensitivity of MRD has not been clarified yet. In this respect, we accomplished this study. METHODS: LAIP-frequencies of bone marrow samples from healthy donors and patients after treatment were quantified and subdivided in "categories of specificity" named as: "strong," "good," and "weak." At the following, the diagnostic performance of MRD was investigated in terms of sensitivity, specificity, predictive values, likelihood ratio (LR). RESULTS: "Strong" LAIPs were identified by CD7, CD2, CD4, and CD56 markers while "weak" LAIPs, independently of coexpressed markers, were mainly observed in CD33+ cells. MRD identified patients with significantly low DFS and OS but showed a low sensitivity in predicting relapse. Interestingly, majority of recurrences was noticed in patients with two LAIPs and lacking of "strong" LAIPs or only with one "good" LAIP. Thus, only patients showing one "strong" or two "good" LAIPs were considered suitable for MRD monitoring and selected to be further investigated. In this subset, positive MRD predicted a poor prognosis. Moreover, a higher sensitivity, negative predictive value (NPV) and LR- were observed after comparison with the previous series. CONCLUSIONS: These data highlight the relevant role of LAIP classification in "categories of specificity" in improving the sensitivity of MRD as assessed by FC.


Subject(s)
Flow Cytometry/methods , Immunophenotyping/methods , Leukemia, Myeloid, Acute/diagnosis , Neoplasm, Residual/diagnosis , Adult , Aged , Antigens, CD7/immunology , Bone Marrow/immunology , Bone Marrow/pathology , CD2 Antigens/immunology , CD4 Antigens/immunology , CD56 Antigen/immunology , Cell Lineage/immunology , Female , Healthy Volunteers , Humans , Leukemia, Myeloid, Acute/complications , Leukemia, Myeloid, Acute/immunology , Male , Middle Aged , Neoplasm, Residual/etiology , Neoplasm, Residual/immunology , Recurrence , Sialic Acid Binding Ig-like Lectin 3/immunology
3.
Nature ; 574(7778): 333, 2019 10.
Article in English | MEDLINE | ID: mdl-31616097
4.
Eur J Hum Genet ; 26(3): 387-395, 2018 03.
Article in English | MEDLINE | ID: mdl-29367705

ABSTRACT

Germline variants in the APC gene cause familial adenomatous polyposis. Inherited variants in MutYH, POLE, POLD1, NTHL1, and MSH3 genes and somatic APC mosaicism have been reported as alternative causes of polyposis. However, ~30-50% of cases of polyposis remain genetically unsolved. Thus, the aim of this study was to investigate the genetic causes of unexplained adenomatous polyposis. Eight sporadic cases with >20 adenomatous polyps by 35 years of age or >50 adenomatous polyps by 55 years of age, and no causative germline variants in APC and/or MutYH, were enrolled from a cohort of 56 subjects with adenomatous colorectal polyposis. APC gene mosaicism was investigated on DNA from colonic adenomas by Sanger sequencing or Whole Exome Sequencing (WES). Mosaicism extension to other tissues (peripheral blood, saliva, hair follicles) was evaluated using Sanger sequencing and/or digital PCR. APC second hit was investigated in adenomas from mosaic patients. WES was performed on DNA from peripheral blood to identify additional polyposis candidate variants. We identified APC mosaicism in 50% of patients. In three cases mosaicism was restricted to the colon, while in one it also extended to the duodenum and saliva. One patient without APC mosaicism, carrying an APC in-frame deletion of uncertain significance, was found to harbor rare germline variants in OGG1, POLQ, and EXO1 genes. In conclusion, our restrictive selection criteria improved the detection of mosaic APC patients. In addition, we showed for the first time that an oligogenic inheritance of rare variants might have a cooperative role in sporadic colorectal polyposis onset.


Subject(s)
Adenomatous Polyposis Coli/genetics , Genes, APC , Mosaicism , Multifactorial Inheritance , Adenomatous Polyposis Coli/pathology , Adult , DNA Glycosylases/genetics , DNA Repair Enzymes/genetics , DNA-Directed DNA Polymerase/genetics , Exodeoxyribonucleases/genetics , Female , Humans , Male , Middle Aged , DNA Polymerase theta
5.
Sci Rep ; 7(1): 6900, 2017 07 31.
Article in English | MEDLINE | ID: mdl-28761122

ABSTRACT

There are two main approximate theories in the contact of rough solids: Greenwood-Williamson asperity theories (GW) and Persson theories. Neither of them has been fully assessed so far with respect to load-separation curves. Focusing on the most important case of low fractal dimension (D f = 2.2) with extensive numerical studies we find that: (i) Persson's theory describes well the regime of intermediate pressures/contact area, but requires significant corrective factors: the latter depend also on upper wavevector cutoff of the roughness; hence, (ii) Persson's theory does not predict the correct functional dependence on magnification; (iii) asperity theories in the discrete version even neglecting interaction effects are more appropriate in the range of relatively large separations, also to take into consideration of the large scatter in actual realization of the surface.

6.
J Orthop Res ; 31(10): 1627-32, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23813771

ABSTRACT

Ceramic-on-ceramic hip joints have been reported to squeak, a phenomenon that may occur in compromised lubrication conditions. One factor related to the incidence of in vivo squeaking is the stem design. However, it has not yet been possible to relate stem design to squeaking in deteriorating lubrication conditions. The purpose of this study was to determine critical friction factors for different stem designs. A hip simulator was used to measure the friction factor of a ceramic bearing with different stem designs and gradually deteriorating lubrication represented by evaporation of a volatile fluid lubricant. The critical squeaking friction factor was measured at the onset of squeaking for each stem. Critical friction was higher for the long cobalt chrome (0.32 ± 0.02) and short titanium stems (0.39 ± 0.02) in comparison with a long titanium stem (0.29 ± 0.02). The onset of squeaking occurred at a friction factor lower than that measured for dry conditions, in which squeaking is usually investigated experimentally. The results suggest that shorter or heavier stems might limit the possibility of squeaking as lubrication deteriorates. The method developed can be used to investigate the influence of design parameters on squeaking probability.


Subject(s)
Arthroplasty, Replacement, Hip , Ceramics , Friction/physiology , Hip Joint/physiology , Hip Prosthesis , Prosthesis Design , Acetone , Chromium Alloys , Coated Materials, Biocompatible , Humans , Lubrication , Materials Testing , Movement/physiology , Noise , Temperature , Titanium
7.
Gene ; 515(2): 339-48, 2013 Feb 25.
Article in English | MEDLINE | ID: mdl-23262345

ABSTRACT

BACKGROUND: Hereditary multiple exostosis represents the most frequent bone tumor disease in humans. It consists of cartilage deformities affecting the juxta-ephyseal region of long bones. Usually benign, exostosis could degenerate in malignant chondrosarcoma form in less than 5% of the cases. Being caused by mutations in the predicted tumor suppressor genes, EXT1 (chr 8q23-q24) and EXT2 (chr 11p11-p12) genes, HMEs are usually inherited with an autosomal dominant pattern, although "de novo" cases are not infrequent. AIM: Here we present our genetic diagnostic report on the largest Southern Italy cohort of HME patients consisting of 90 subjects recruited over the last 5years. RESULTS: Molecular screening performed by direct sequencing of both EXT1 and EXT2 genes, by MLPA and Array CGH analyses led to the identification of 66 mutations (56 different occurrences) and one large EXT2 deletion out of 90 patients (74.4%). The total of 21 mutations (20 different occurrences, 33.3%) and the EXT2 gene deletion were novel. In agreement with literature data, EXT1 gene mutations were scattered along all the protein sequence, while EXT2 lesions fell in the first part of the protein. Conservation, damaging prediction and 3-D modeling, in-silico, analyses, performed on three novel missense variants, confirmed that at least in two cases the novel aminoacidic changes could alter the structure stability causing a strong protein misfolding. CONCLUSIONS: Here we present 20 novel EXT1/EXT2 mutations and one large EXT2 deletion identified in the largest Southern Italy cohort of patients affected by hereditary multiple exostosis.


Subject(s)
Exostoses, Multiple Hereditary/genetics , N-Acetylglucosaminyltransferases/genetics , Point Mutation , Sequence Deletion , Adolescent , Adult , Aged , Amino Acid Sequence , Base Sequence , Child , Child, Preschool , Cohort Studies , Comparative Genomic Hybridization , Conserved Sequence , DNA Mutational Analysis , Female , Genetic Association Studies , Humans , Infant , Italy , Male , Middle Aged , Models, Molecular , Molecular Sequence Data , Mutation, Missense , Pedigree , Polymorphism, Single Nucleotide , Protein Isoforms/genetics , Protein Structure, Tertiary , Young Adult
8.
J Colloid Interface Sci ; 315(2): 786-90, 2007 Nov 15.
Article in English | MEDLINE | ID: mdl-17689550

ABSTRACT

Present understanding of adhesion is mostly due to the well-known contact theories for spheres, including JKR (Johnson-Kendall-Roberts), DMT (Derjaguin-Muller-Toporov) and MD (Maugis-Dugdale). Since most of the models exhibit their optimal applicability only in a specific regime, an adhesion map has been developed [K.L. Johnson, J.A. Greenwood, J. Colloid Interface Sci. (1997)] to guide the selection among different models. In the JG (Johnson-Greenwood) map, however, an important physical fact has been neglected that the adhesion strength must not exceed the theoretical strength; thereby the applicability of the classical adhesion models is overestimated and misguidance may arise from the JG map. To avoid this limitation, in this paper we introduce the strength limit into the adhesion map and find that the selection of adhesion models depends not only on the Tabor number but also on the ratio of the theoretical strength to the stiffness. Given this ratio, there exists a critical Tabor number or the size of the sphere, below which adhesion is dominated by the limiting strength and the classical adhesion models are no longer appropriate for spheres. These results eventually lead to a corrected adhesion map for spheres.

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