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1.
J Am Chem Soc ; 129(28): 8801-10, 2007 Jul 18.
Article in English | MEDLINE | ID: mdl-17580945

ABSTRACT

The electrochemical behavior of diversely substituted Cu-N3-calix[6]arene, enzyme-like, "funnel" complexes is analyzed. The Cu(II)/Cu(I) redox process is regulated by the supramolecular organization of the Cu coordination. The presence of a "shoetree" alkyl nitrile guest molecule inside the host cavity is a prerequisite for a dynamic redox behavior. Combination of supramolecular CH-pi weak interactions with the calixarene cavity and electronic/steric effects from the N3 substituting groups (pyridine, imidazole, pyrrolidine) enforces the preferential geometrical pattern adopted by Cu. This dictates the pathway of the electron-transfer process and, thus, the thermodynamics and kinetics of the redox reaction in the framework of a square-scheme mechanism. The present observations recall strongly the redox control exerted by the protein matrix on copper proteins through biological concepts such as induced fit mechanism, protein foldings, and entatic and allosteric effects.


Subject(s)
Biomimetics , Calixarenes/chemistry , Copper/chemistry , Phenols/chemistry , Binding Sites , Electrochemistry , Kinetics , Models, Biological , Oxidation-Reduction , Thermodynamics
2.
Biotechnol Bioeng ; 95(1): 29-36, 2006 Sep 05.
Article in English | MEDLINE | ID: mdl-16637059

ABSTRACT

A set of engineered peptides (33 amino acids long) corresponding to the helix-turn-helix (EF-Hand) motif of the metal-binding site I of the protein calmodulin from paramecium tetraurelia have been synthesized. A disulfide bridge has been introduced in the native sequence in order to stabilize a native-like conformation. The calcium-binding carboxylate residues in positions 20, 22, 24, and 31 were mutated into other amino acids and the influence of such mutations on the binding affinity of the peptides for calcium and lanthanides have been studied. It was shown that the binding affinity for terbium ions can be modulated with dissociation constants ranging from 40 nmolar to 40 mmolar. The study of the influence of the mutations on the terbium affinity showed that the residue in position 24 played a key role on the capability of the peptides to bind lanthanides and that the affinity could be enhanced by mutations on non-coordinating positions. Such peptides with high affinity for lanthanides may facilitate the development of new highly sensitive biosensors to monitor the metal pollution in the environment.


Subject(s)
Biosensing Techniques/methods , Calmodulin/analysis , Calmodulin/chemistry , Lanthanoid Series Elements/analysis , Lanthanoid Series Elements/chemistry , Amino Acid Sequence , Amino Acid Substitution , Binding Sites , Isomerism , Molecular Sequence Data , Peptides/analysis , Peptides/chemistry , Protein Binding , Protein Engineering/methods , Spectrometry, Fluorescence/methods , Structure-Activity Relationship
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