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1.
J Mol Biol ; 272(5): 716-30, 1997 Oct 10.
Article in English | MEDLINE | ID: mdl-9368653

ABSTRACT

Nuclear transport factor 2 (NTF2) is associated with the translocation stage of nuclear protein import and binds both to nuclear pore proteins (nucleoporins) containing phenylalanine-rich repeats and to the Ras family GTPase Ran. In this study we probed the role of the NTF2-Ran interaction in nuclear protein import using site-directed mutants of NTF2 that interfere with its interaction with GDP-Ran. The design of these mutants was based on the X-ray crystal structure of NTF2 and was concentrated on conserved residues in and around the molecule's hydrophobic cavity. The mutant NTF2 cDNAs were expressed in Escherichia coli. Purified mutant proteins retained the interaction with FxFG-repeat nucleoporins, but several mutants in the negatively charged residues that surround the NTF2 cavity or in residues in the cavity itself were unable to bind GDP-Ran in vitro. The crystal structure of the E42K mutant protein showed significant structural changes only in this side-chain, indicating that it participated directly in the interaction with GDP-Ran. In permeabilised cell nuclear protein import assays, only wild-type NTF2 and mutants that bound GDP-Ran were functional. Furthermore, when the NTF2 E42K and D92N/D94N NTF2 mutants that failed to bind GDP-Ran in vitro were substituted for the chromosomal yeast NTF2, the yeast cells became non-viable, whereas yeast substituted with wild-type human NTF2 remained viable. We conclude that interaction between NTF2 and GDP-Ran is important for efficient nuclear protein import.


Subject(s)
Carrier Proteins/metabolism , GTP Phosphohydrolases/metabolism , Nuclear Proteins/metabolism , Nucleocytoplasmic Transport Proteins , Animals , Carrier Proteins/chemistry , Carrier Proteins/genetics , Cell Membrane Permeability , Cloning, Molecular , Crystallography, X-Ray , Electrophoresis, Polyacrylamide Gel , Fungal Proteins/genetics , Fungal Proteins/metabolism , Membrane Glycoproteins/metabolism , Models, Molecular , Mutagenesis, Site-Directed/genetics , Nuclear Pore Complex Proteins , Nuclear Proteins/chemistry , Nuclear Proteins/genetics , Plasmids/genetics , Protein Binding , Rats , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Sequence Alignment , Sodium Chloride/pharmacology , ran GTP-Binding Protein
2.
J Mol Biol ; 266(4): 722-32, 1997 Mar 07.
Article in English | MEDLINE | ID: mdl-9102465

ABSTRACT

We have used in vitro binding assays to examine specific interactions between a number of cytoplasmic and nuclear pore proteins involved in nuclear protein import in vertebrates. We demonstrate that nuclear transport factor 2 (NTF2), nucleoporin p62 and the Ras-like GTPase Ran bind to the importin heterodimer via its beta subunit. The binding behaviour of p62 truncation mutants indicated that importin-beta interacts primarily with the alpha-helical coiled-coil rod domain of nucleoporin p62 and not with the N-terminal domain that contains a number of degenerate repeats based on the xFxFG sequence motif. The binding of Ran to importin-beta was sensitive to its nucleotide state, with RanGTP binding strongly, whereas RanGDP binding could not be detected using our assay conditions. RanGTP, but not RanGDP, was able to displace p62 bound to the importin alpha/beta complex, suggesting that the binding sites for p62 and RanGTP on importin-beta overlap. Moreover, RanGTP, but not RanGDP, weakened the interaction between importin-alpha and importin-beta in a concentration-dependent manner. NTF2 bound to the importin heterodimer but did not displace p62, suggesting that the NTF2 and p62 binding sites on importin-beta do not overlap. The set of interactions we observed was not altered by the binding of NLS-containing substrates such as transcription factor IIIA to the importin heterodimer. Our results are consistent with models for nuclear protein import in which Ran nucleotide exchange modulates the binding of the importin-substrate complexes during translocation through nuclear pore complexes.


Subject(s)
Nuclear Envelope/metabolism , Nuclear Proteins/metabolism , Nucleocytoplasmic Transport Proteins , Amino Acid Sequence , Animals , Carrier Proteins/metabolism , Cell Nucleus/chemistry , Cell Nucleus/metabolism , DNA-Binding Proteins/metabolism , Dimerization , Electrophoresis, Polyacrylamide Gel , Humans , Membrane Glycoproteins/metabolism , Molecular Sequence Data , Mutation/genetics , Nuclear Envelope/chemistry , Nuclear Localization Signals , Nuclear Pore Complex Proteins , Protein Binding , Protein Structure, Secondary , Rats , Transcription Factor TFIIIA , Transcription Factors/metabolism , alpha Karyopherins , beta Karyopherins , ran GTP-Binding Protein
3.
J Mol Biol ; 263(4): 517-24, 1996 Nov 08.
Article in English | MEDLINE | ID: mdl-8918934

ABSTRACT

Nuclear transport factor 2 (NTF2) facilitates nuclear protein import through nuclear pore complexes (NPCs). Bacterially expressed rat NTF2 exists in solution as dimers and, when bound to Sepharose beads, is able to interact specifically with both the Ras-like GTPase Ran, and the xFxFG repeat containing domains of nucleoporins p62 (vertebrate) and Nsp1p (yeast). These interactions are sufficiently strong and specific to enable native Ran and p62 to be isolated from crude rat liver homogenates. Comparison of the sequences of the xFxFG repeat regions of p62 and Nsplp indicated that NTF2 was probably interacting with the phenylalanine-containing core of these repeats and not the intervening hydrophilic linkers. Ran and p62 do not compete with one another for binding to NTF2, indicating that they bind to different sites on NTF2. These interactions could help target Ran and NTF2 to a series of putative docking sites for the importin-substrate complex located along the central transport channel of the NPC and so facilitate the passage of import material being transported from the cytoplasm into the nucleus.


Subject(s)
Calcium-Binding Proteins , Carrier Proteins/metabolism , Fungal Proteins/metabolism , Membrane Glycoproteins/metabolism , Nuclear Proteins/metabolism , Nucleocytoplasmic Transport Proteins , Repetitive Sequences, Nucleic Acid , Saccharomyces cerevisiae Proteins , Amino Acid Sequence , Animals , Binding Sites , Binding, Competitive , Carrier Proteins/chemistry , Chromatography, Liquid/methods , Electrophoresis, Polyacrylamide Gel/methods , Guanosine Diphosphate/metabolism , Membrane Glycoproteins/chemistry , Membrane Glycoproteins/genetics , Molecular Sequence Data , Nuclear Pore Complex Proteins , Nuclear Proteins/chemistry , Phenylalanine/chemistry , Protein Conformation , Rats , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sepharose , Serum Albumin, Bovine/metabolism , ran GTP-Binding Protein
4.
J Mol Biol ; 260(3): 422-31, 1996 Jul 19.
Article in English | MEDLINE | ID: mdl-8757804

ABSTRACT

Nuclear transport factor 2 (NTF2) facilitates protein transport into the nucleus and interacts with both the small Ras-like GTPase Ran and nucleoporin p62. We have determined the structure of bacterially expressed rat NTF2 at 1.6 angstroms resolution using X-ray crystallography. The NTF2 polypeptide chain forms an alpha + beta barrel that opens at one end to form a distinctive hydrophobic cavity and its fold is homologous to that of scytalone dehydratase. The NTF2 hydrophobic cavity is a candidate for a potential binding site for other proteins involved in nuclear import such as Ran and nucleoporin p62. In addition, the hydrophobic cavity contains a putative catalytic Asp-His pair, which raises the possibility of an unanticipated enzymatic activity of the molecule that may have implications for the molecular mechanism of nuclear protein import.


Subject(s)
Carrier Proteins/chemistry , Nuclear Proteins/chemistry , Nucleocytoplasmic Transport Proteins , Amino Acid Sequence , Animals , Carrier Proteins/genetics , Carrier Proteins/metabolism , Crystallography, X-Ray , Gene Expression , Hydro-Lyases/chemistry , Membrane Glycoproteins/metabolism , Models, Molecular , Molecular Sequence Data , Nuclear Pore Complex Proteins , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Protein Binding , Protein Conformation , Protein Folding , Rats , Sequence Homology, Amino Acid , ran GTP-Binding Protein
5.
Curr Opin Struct Biol ; 6(2): 162-5, 1996 Apr.
Article in English | MEDLINE | ID: mdl-8728648

ABSTRACT

Transport in and out of the nucleus is mediated by nuclear pore complexes (NPCs). Information has recently been emerging both on the structure of many of the proteins involved in this transport and on the complexes formed between them. In addition to NPC-based complexes, such as those based on nucleoporins Nsp1p and p62, cytoplasmic protein macromolecular assemblies are also important for nucleocytoplasmic transport.


Subject(s)
Cell Nucleus/metabolism , Cytoplasm/metabolism , Membrane Glycoproteins/chemistry , Nuclear Envelope/chemistry , Nuclear Proteins/chemistry , Animals , Biological Transport , Macromolecular Substances , Nuclear Proteins/metabolism
6.
J Struct Biol ; 116(2): 326-9, 1996.
Article in English | MEDLINE | ID: mdl-8812990

ABSTRACT

We have cloned and expressed in Escherichia coli cDNA for rat nuclear transport factor 2 (NTF2), a key cytoplasmic factor that facilitates the import of proteins into the nucleus through nuclear pores. We have used this bacterially expressed material to produce orthorhombic crystals suitable for high-resolution X-ray diffraction structure determination. The crystals have P212121 symmetry with a = 55.9 A; b = 56.7 A; c = 88.3 A and diffract past 2 A on laboratory X-ray sources. The asymmetric unit of these crystals contains two NTF2 polypeptide chains, consistent with the reported dimeric structure of the molecule.


Subject(s)
Carrier Proteins/chemistry , Nuclear Proteins/chemistry , Nucleocytoplasmic Transport Proteins , Amino Acid Sequence , Animals , Base Sequence , Carrier Proteins/genetics , Carrier Proteins/isolation & purification , Crystallization , Crystallography, X-Ray , DNA, Complementary/genetics , Molecular Sequence Data , Nuclear Proteins/genetics , Nuclear Proteins/isolation & purification , Protein Conformation , Rats , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/isolation & purification
7.
Cell Calcium ; 13(9): 553-64, 1992 Oct.
Article in English | MEDLINE | ID: mdl-1334809

ABSTRACT

We have previously reported that a component of ADP-evoked Ca2+ entry in human platelets appears to be promoted following the release of Ca2+ from intracellular stores. Other agonists may employ a similar mechanism. Here we have further investigated the relationship between the state of filling of the Ca2+ stores and plasma membrane Ca2+ permeability in Fura-2-loaded human platelets. Ca2+ influx was promoted following store depletion by inhibitors of the endoplasmic reticulum Ca(2+)-ATPase, thapsigargin (TG) and 2,5-di-(t-butyl)-1,4-benzohydroquinone (tBuBHQ). Divalent cation entry was confirmed by quenching of Fura-2 fluorescence with externally added Mn2+. It has been suggested that cytochrome P-450 may couple Ca2+ store depletion to an increased plasma membrane Ca2+ permeability. In apparent agreement with this, Mn2+ influx promoted by TG and tBuBHQ, or by preincubation of cells in Ca(2+)-free medium, was inhibited by the imidazole antimycotics, econazole and miconazole, which inhibit cytochrome P-450 activity. Agonist-evoked Mn2+ influx was only partially inhibited by these compounds at the same concentration (3 microM). Econazole (3 microM) reduced the Mn2+ quench evoked by ADP by 38% of the control value and that evoked by vasopressin, platelet activating factor (PAF) and thrombin no more than 15% of control, 20 s after agonist addition. Stopped-flow fluorimetry indicated that econazole had no detectable effect on the early time course of agonist-evoked Mn2+ entry or rises in [Ca2+]i. These data confirm the existence of a Ca2+ entry pathway in human platelets which is activated by depletion of the intracellular Ca2+ stores. Further, the results support the suggestion that cytochrome P-450 may participate in such a pathway. However, any physiological role for the cytochrome or its products in agonist-evoked events appears to be in the long-term maintenance or restoration of store Ca2+ content, rather than in promoting Ca2+ influx in the initial stages of platelet Ca2+ signal generation.


Subject(s)
Blood Platelets/metabolism , Calcium Channels/drug effects , Calcium/metabolism , Cytochrome P-450 Enzyme System/physiology , Ion Channel Gating/drug effects , Adenosine Diphosphate/pharmacology , Blood Platelets/drug effects , Blood Platelets/enzymology , Calcium Channels/metabolism , Calcium Channels/physiology , Calcium-Transporting ATPases/antagonists & inhibitors , Cell Compartmentation , Cytochrome P-450 Enzyme Inhibitors , Econazole/pharmacology , Humans , Hydroquinones/pharmacology , Inositol 1,4,5-Trisphosphate/physiology , Intracellular Fluid/metabolism , Manganese/metabolism , Miconazole/pharmacology , Osmolar Concentration , Platelet Activating Factor/pharmacology , Platelet Activation/drug effects , Receptors, Cholinergic/physiology , Ryanodine Receptor Calcium Release Channel , Signal Transduction , Terpenes/pharmacology , Thapsigargin , Thrombin/pharmacology , Vasopressins/pharmacology
8.
J Am Vet Med Assoc ; 195(1): 77-80, 1989 Jul 01.
Article in English | MEDLINE | ID: mdl-2759899

ABSTRACT

A 4-month-old Pomeranian pup was examined because of anorexia, salivation, and persistent vomiting. Initial laboratory testing revealed marked hemolytic anemia with spherocytosis. Survey abdominal radiography revealed 4 metal objects which, when removed by gastrotomy, were identified as pennies. Of 4 pennies, 3 were minted since 1983 and were heavily pitted over the surface and rim. Partially digested pennies were composed of a copper-plated high zinc concentration alloy. Further laboratory testing indicated a marked increase in serum zinc concentration in the pup (28.8 mg/L), confirming metal toxicosis. Serum zinc concentrations decreased during recovery.


Subject(s)
Anemia, Hemolytic/veterinary , Dog Diseases/chemically induced , Foreign Bodies/veterinary , Zinc/poisoning , Anemia, Hemolytic/chemically induced , Animals , Copper/blood , Dogs , Female , Zinc/blood
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