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1.
Proc Natl Acad Sci U S A ; 107(32): 14020-5, 2010 Aug 10.
Article in English | MEDLINE | ID: mdl-20660317

ABSTRACT

Thirty years after the first discovery of high-temperature submarine venting, the vast majority of the global mid-ocean ridge remains unexplored for hydrothermal activity. Of particular interest are the world's ultraslow spreading ridges that were the last to be demonstrated to host high-temperature venting but may host systems particularly relevant to prebiotic chemistry and the origins of life. Here we report evidence for previously unknown, diverse, and very deep hydrothermal vents along the approximately 110 km long, ultraslow spreading Mid-Cayman Rise (MCR). Our data indicate that the MCR hosts at least three discrete hydrothermal sites, each representing a different type of water-rock interaction, including both mafic and ultramafic systems and, at approximately 5,000 m, the deepest known hydrothermal vent. Although submarine hydrothermal circulation, in which seawater percolates through and reacts with host lithologies, occurs on all mid-ocean ridges, the diversity of vent types identified here and their relative geographic isolation make the MCR unique in the oceans. These new sites offer prospects for an expanded range of vent-fluid compositions, varieties of abiotic organic chemical synthesis and extremophile microorganisms, and unparalleled faunal biodiversity--all in close proximity.


Subject(s)
Hot Temperature , Seawater , Biodiversity , Geography , Oceans and Seas
2.
Curr Pharm Des ; 15(33): 3904-7, 2009.
Article in English | MEDLINE | ID: mdl-19671041

ABSTRACT

Cellular and systemic oxygen homeostasis is regulated by an oxygen-sensitive signalling pathway centred on a transcription factor known as Hypoxia Inducible Factor (HIF). Regulation of HIF activity and protein stability is mediated by a family of hydroxylases that act as oxygen sensors due to the dependence of the hydroxylation reaction on oxygen. The transcriptional activity of HIF is at least in part determined by asparaginyl hydroxylation by Factor Inhibiting HIF (FIH) of a C-terminal residue that regulates co-activator recruitment. The activity of FIH on HIF is limiting; emerging data suggest this may be due to competition from a large family of alternative FIH substrates that act as a 'sink' for FIH activity. These alternative substrates are targeted for hydroxylation at conserved Asn residues within a protein interaction domain known as the Ankyrin Repeat Domain (ARD). Many ARD-containing proteins bind to FIH more tightly than does HIF. Furthermore, ARD proteins are common within the proteome and in some cases are highly abundant. Since ARD substrates bind to FIH in a similar manner to HIF it is thought that these properties of the ARD family lead to competitive inhibition of FIH-dependent HIF hydroxylation. We summarise the current literature here and discuss the possible role of cross-talk between the FIH, HIF and ARD systems in fine tuning hypoxia responses.


Subject(s)
Ankyrin Repeat , Hypoxia-Inducible Factor 1/metabolism , Repressor Proteins/metabolism , Homeostasis , Humans , Hydroxylation , Mixed Function Oxygenases , Oxygen/metabolism , Protein Binding , Signal Transduction/physiology
3.
Oncogene ; 25(19): 2708-16, 2006 May 04.
Article in English | MEDLINE | ID: mdl-16407839

ABSTRACT

The proto-oncogene Ras GTPase stimulates transcription of p21Waf1/Cip1 (p21), which is repressed by the RhoA GTPase. We previously showed that Ras also elevates p21 protein levels by reducing its proteasome-mediated degradation. Therefore, we investigated whether RhoA also influenced p21 protein degradation. Pulse-chase analysis of p21 protein stability revealed that inhibitors of Rho function, which disrupt filamentous actin (F-actin), drastically slowed p21 degradation. Direct F-actin disruption mimicked Rho inhibition to stabilize p21. We found that Rho inhibition, or F-actin disruption, activated the JNK stress-activated protein kinase, and that interfering with JNK signalling, but not p38, abrogated p21 stabilization by Rho inhibition or F-actin-disrupting drugs. In addition, Ras-transformation led to increased constitutive JNK activity that contributed to the elevated p21 protein levels. These data suggest that p21 stability is influenced by a mechanism that monitors F-actin downstream of Rho, and which acts through a pathway involving activation of JNK. These results may have significant implications for therapies that target Rho-signalling pathways to induce p21-mediated cell-cycle arrest.


Subject(s)
Actins/metabolism , Cyclin-Dependent Kinase Inhibitor p21/metabolism , Cytoskeleton/metabolism , rhoA GTP-Binding Protein/metabolism , Animals , Blotting, Northern , Blotting, Western , Cell Transformation, Neoplastic , Cyclin-Dependent Kinase Inhibitor p21/genetics , Enzyme Stability , Fibroblasts/cytology , Fibroblasts/metabolism , MAP Kinase Kinase 4/metabolism , Mice , NIH 3T3 Cells , Proto-Oncogene Mas , Signal Transduction , Swiss 3T3 Cells , p38 Mitogen-Activated Protein Kinases/metabolism , ras Proteins/pharmacology , rhoA GTP-Binding Protein/genetics
4.
Cell Death Differ ; 9(5): 493-504, 2002 May.
Article in English | MEDLINE | ID: mdl-11973608

ABSTRACT

The killing and removal of superfluous cells is an important step during embryonic development, tissue homeostasis, wound repair and the resolution of inflammation. A specific sequence of biochemical events leads to a form of cell death termed apoptosis, and ultimately to the disassembly of the dead cell for phagocytosis. Dynamic rearrangements of the actin cytoskeleton are central to the morphological changes observed both in apoptosis and phagocytosis. Recent research has highlighted the importance of Rho GTPase signalling pathways to these changes in cellular architecture. In this review, we will discuss how these signal transduction pathways affect the structure of the actin cytoskeleton and allow for the efficient clearance of apoptotic cells.


Subject(s)
Apoptosis/physiology , Caenorhabditis elegans Proteins , Signal Transduction/physiology , rho GTP-Binding Proteins/metabolism , Actin Cytoskeleton/chemistry , Actin Cytoskeleton/metabolism , Animals , Caenorhabditis elegans/genetics , Caspases/metabolism , Humans , Mammals/genetics , Membrane Proteins/genetics , Membrane Proteins/metabolism , Phagocytosis/genetics , Phagocytosis/physiology , rho GTP-Binding Proteins/genetics
6.
Anal Chem ; 73(20): 4946-50, 2001 Oct 15.
Article in English | MEDLINE | ID: mdl-11681470

ABSTRACT

Chlorate and perchlorate compounds, used as herbicides, solid fuel propellants, and explosives, are increasingly recognized as pollutants in groundwater. Stable isotope characterization would permit both environmental monitoring of extent of remediation and forensic characterization. Stoichiometric reduction to chloride (greater than 98% yield), by Fe(II) for chlorate and alkaline fusion-decomposition for perchlorate, allows analysis by standard methods to give highly reproducible and accurate delta37Cl results (0.05/1000, 2 x standard error). Analysis of various compounds from different suppliers yielded delta37Cl values for chlorate samples near to +0.2/1000 (SMOC), but one has within-sample heterogeneity of 0.5/1000, possibly due to crystallization processes during manufacture. Results for perchlorate samples also are generally near +0.2/1000, but one is +2.3/1000 (SMOC). The initial results suggest that both forensic and environmental applications might be feasible.


Subject(s)
Chlorates/analysis , Chlorine/analysis , Perchlorates/analysis , Water Pollutants, Chemical/analysis , Chlorates/chemistry , Chlorine/chemistry , Isotopes/analysis , Isotopes/chemistry , Oxidation-Reduction , Perchlorates/chemistry
7.
Nat Cell Biol ; 3(4): 339-45, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11283606

ABSTRACT

The execution phase of apoptosis is characterized by marked changes in cell morphology that include contraction and membrane blebbing. The actin-myosin system has been proposed to be the source of contractile force that drives bleb formation, although the biochemical pathway that promotes actin-myosin contractility during apoptosis has not been identified. Here we show that the Rho effector protein ROCK I, which contributes to phosphorylation of myosin light-chains, myosin ATPase activity and coupling of actin-myosin filaments to the plasma membrane, is cleaved during apoptosis to generate a truncated active form. The activity of ROCK proteins is both necessary and sufficient for formation of membrane blebs and for re-localization of fragmented DNA into blebs and apoptotic bodies.


Subject(s)
Apoptosis , Caspases/metabolism , Protein Serine-Threonine Kinases/metabolism , 3T3 Cells , Animals , Caspase Inhibitors , Cell Membrane/pathology , DNA/metabolism , DNA Fragmentation , Enzyme Activation , Humans , Intracellular Signaling Peptides and Proteins , Mice , Protein Serine-Threonine Kinases/genetics , Recombinant Fusion Proteins/genetics , Tumor Cells, Cultured , rho-Associated Kinases
9.
Arthritis Rheum ; 28(11): 1211-8, 1985 Nov.
Article in English | MEDLINE | ID: mdl-3933523

ABSTRACT

We investigated the correlation between whole blood gold concentrations and clinical outcomes in 59 auranofin-treated patients and 51 gold sodium thiomalate-treated patients who completed a 21-week, placebo-controlled, multicenter parallel trial. Whole blood gold concentrations did not correlate with clinical outcome, as assessed by changes in joint tenderness, joint swelling, or Westergren erythrocyte sedimentation rate. They also did not correlate with toxic reactions necessitating withdrawal from the study.


Subject(s)
Arthritis, Rheumatoid/drug therapy , Aurothioglucose/analogs & derivatives , Gold Sodium Thiomalate/therapeutic use , Gold/analogs & derivatives , Gold/blood , Adolescent , Adult , Arthritis, Rheumatoid/blood , Auranofin , Aurothioglucose/therapeutic use , Clinical Trials as Topic , Double-Blind Method , Gold Sodium Thiomalate/adverse effects , Humans , Joints/pathology , Placebos
10.
Control Clin Trials ; 6(1): 12-24, 1985 Mar.
Article in English | MEDLINE | ID: mdl-3987300

ABSTRACT

Measurement of improvement in clinical trials in chronic diseases commonly compares baseline data to endpoint values by performing t-tests or analysis of variance (ANOVA) on raw gains or percentage changes. This procedure can be misleading and the use of an analysis of covariance (ANCOVA) should be considered. Properly used, ANCOVA increases statistical power in a clinical trial. However, its advantage over t-tests can be nullified by small numbers of patients, violations of assumptions, and incorrect application of the techniques. An evaluation of ANCOVA in chronic disease studies is given, with examples of its strengths and weaknesses as seen in several drug trials in the rheumatic diseases. Recommendations on its use and a decision tree for the nonstatistician are provided.


Subject(s)
Analysis of Variance , Clinical Trials as Topic , Arthritis/drug therapy , Arthritis, Rheumatoid/drug therapy , Double-Blind Method , Humans , Psoriasis/drug therapy , Random Allocation , Research Design , Sampling Studies
11.
Arthritis Rheum ; 27(7): 721-7, 1984 Jul.
Article in English | MEDLINE | ID: mdl-6378208

ABSTRACT

Two hundred six patients were entered into a prospective controlled, double-blind, multicenter trial comparing azathioprine (AZA) 1.25-1.5 mg/kg/day with D-penicillamine (DP) 10-12 mg/kg/day. One hundred thirty-four patients completed 24 weeks of therapy. Improvement in nearly all efficacy variables was seen in both groups. Patients taking DP demonstrated a greater rise in hemoglobin concentration and greater fall in erythrocyte sedimentation rate than patients receiving AZA; these were the only efficacy variables with a significant difference between the treatment groups. Fewer withdrawals for adverse reactions occurred among the patients receiving AZA, but the difference was not significant. Patients receiving AZA were withdrawn from the drug mainly for abnormal liver function test results, nausea and gastrointestinal upset, and leukopenia. The main reasons for withdrawal of patients receiving DP were nausea, rash and pruritus, thrombocytopenia, dysgeusia, and proteinuria.


Subject(s)
Arthritis, Rheumatoid/drug therapy , Azathioprine/therapeutic use , Penicillamine/therapeutic use , Azathioprine/adverse effects , Clinical Trials as Topic , Double-Blind Method , Female , Gold/therapeutic use , Humans , Male , Middle Aged , Penicillamine/adverse effects , Random Allocation , Time Factors
12.
Br J Nutr ; 51(2): 199-208, 1984 Mar.
Article in English | MEDLINE | ID: mdl-6367817

ABSTRACT

A new method has been developed for the study of zinc metabolism in man using the stable isotope 67Zn. The technique involves intravenous infusion of the isotope followed by measurements of the plasma and faecal enrichments over a period of days. A procedure for the analysis of Zn isotopes in plasma and faeces is described which requires the separation of Zn from other elements using the chelator dithizone before analysis by thermal-ionization mass spectrometry. The stable isotope technique has been used in conjunction with a metabolic balance study to obtain measurements of Zn absorption and gastrointestinal secretion in a normal subject. Preliminary measurements of the size of the exchangeable pool of Zn have been made as have estimates of the rates of plasma and whole-body Zn turnover. Following an increase in dietary Zn the body appeared to respond in two ways. The gastrointestinal secretion of Zn increased immediately, but only by a relatively small amount. The absorption of Zn initially increased in proportion to the increase in dietary levels but then decreased within 4 d by an amount sufficient to restore Zn balance.


Subject(s)
Homeostasis , Zinc/metabolism , Adult , Digestive System/metabolism , Feces/analysis , Humans , Indicator Dilution Techniques , Intestinal Absorption , Male , Mass Spectrometry , Zinc/blood , Zinc/urine , Zinc Isotopes
13.
J Fam Pract ; 15(2): 339-45, 1982 Aug.
Article in English | MEDLINE | ID: mdl-7097171

ABSTRACT

Patients have infrequently been assessed about their desire for their family physician to possess a certain level of expertise in managing a wide range of behavioral science problems. This has led to inconsistencies in the type of behavioral science training offered to family physicians and thence to a marked discrepancy between the amount of training offered (relatively large) and the amount of mental health care provided (relatively small). This study reports the result of a study of patient attitudes concerning the level of involvement by their family physician for each of 45 psychosocial problems. The levels offered were (1) no help, (2) referral, (3) compassion, concern, and minor advice, and (4) expert therapeutic help. The mean responses place a majority (25 of the 45) of the problems in level 3. Certain obvious problems appeared in level 1 (religious/church problems) and level 4 (pregnancy). Child behavioral problems dominated in level 2. Certain surprises were also found, such as the presence of problems of marital discord in level 1, and the problem of long-term pain in level 4.


Subject(s)
Attitude to Health , Behavioral Sciences/education , Family Practice/education , Adolescent , Adult , Curriculum , Humans , Physician-Patient Relations , Physicians, Family , Pilot Projects , Referral and Consultation , Surveys and Questionnaires
15.
Clin Genet ; 21(3): 187-95, 1982 Mar.
Article in English | MEDLINE | ID: mdl-7094394

ABSTRACT

We describe a familial reciprocal translocation between the distal part of the short arm of chromosome 2 and the long arm of chromosome 10. Five individuals in two generations had multiple congenital anomalies. Their karyotypes were 46,XX or XY, -10, + der(10), t(2;10)(p24;q26). Seven persons were balanced translocation carriers whose karyotypes were 46,XX or XY,t(2;10)(p24;q26). Common manifestations included mental retardation, strabismus, narrow high-arched palate, wide alveolar ridges, other facial abnormalities, genital abnormalities and mutism. The phenotype of the unbalanced individuals is compared to that of previously published cases of the syndrome of partial duplication 2p and to reported patients with partial deletion of 10q.


Subject(s)
Abnormalities, Multiple/genetics , Chromosome Deletion , Chromosomes, Human, 1-3 , Chromosomes, Human, 6-12 and X , Translocation, Genetic , Adult , Child, Preschool , Dermatoglyphics , Female , Heterozygote , Humans , Infant, Newborn , Intellectual Disability/genetics , Karyotyping , Male , Mutism/genetics , Pedigree
16.
Am J Med ; 70(3): 677-80, 1981 Mar.
Article in English | MEDLINE | ID: mdl-7211900

ABSTRACT

Prospectively studied were 520 patients undergoing elective thoracic, upper abdominal and lower abdominal surgeries to analyze risk factors for postoperative pneumonias. Over-all, pneumonias developed in 91 of the 520 patients studied (17.5 percent). The acquisition of pneumonia was highly associated with preoperative markers of the severity of underlying diseases such as low serum albumin concentrations on admission (P less than 0.005) and high American Society of Anesthesiologists pre-anesthesia physical status classification (P less than 0.0001). History of smoking (P less than 0.001), longer preoperative stays (P less than 0.0001), longer operative procedures (P less than 0.0001) and thoracic or upper abdominal sites of surgery (P less than 0.0001) were also significant risk factors for postoperative pneumonias. Although massive obesity, old age and male sex were also associated with increased incidences of pneumonia, statistical significance was lost when these variables were controlled for site or duration of surgery. We were able to identify risk factors for pneumonia and to define a subpopulation of patients in which the risk of pneumonia was negligible. The acquisition of pneumonia by a low-risk patient should alert the physician to the possibility of a potentially preventable nosocomial infection.


Subject(s)
Cross Infection/etiology , Pneumonia/etiology , Postoperative Complications/etiology , Adult , Age Factors , Aged , Body Weight , Female , Humans , Male , Middle Aged , Prospective Studies , Risk , Serum Albumin/analysis , Sex Factors , Smoking
18.
J Med Genet ; 15(1): 73-6, 1978 Feb.
Article in English | MEDLINE | ID: mdl-633320

ABSTRACT

Chromosome analysis of an infant with characteristic features of trisomy 18 is presented. The chromosome complement contained a modal count of 47 but there was only one No. 18. In addition, there were two metacentric chromosomes of different sizes. The two metacentric chromosomes were identified by G- and C-banding to be possible isochromosomes of the long and short arms of a No. 18 chromosome.


Subject(s)
Chromosomes, Human, 16-18 , Trisomy , Azure Stains , Chromosomes/ultrastructure , Chromosomes, Human , Female , Follow-Up Studies , Humans , Infant , Infant, Newborn , Karyotyping
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