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1.
J Clin Microbiol ; 55(4): 1140-1146, 2017 04.
Article in English | MEDLINE | ID: mdl-28122871

ABSTRACT

Bloodstream infections are a leading cause of morbidity and mortality in the United States and are associated with increased health care costs. We evaluated the Portrait Staph ID/R blood culture panel (BCP) multiplex PCR assay (Great Basin Scientific, Salt Lake City, UT) for the rapid and simultaneous identification (ID) of Staphylococcus aureus, Staphylococcus lugdunensis, and Staphylococcus species to the genus level and the detection of the mecA gene directly from a positive blood culture bottle. A total of 765 Bactec bottles demonstrating Gram-positive cocci in singles or clusters were tested during the prospective trial at 3 clinical sites. The Portrait Staph ID/R BCP results were compared with results from conventional biochemical and cefoxitin disk methods performed at an independent laboratory. Discordant ID and mecA results were resolved by rpoB gene sequencing and mecA gene sequencing, respectively. A total of 658 Staphylococcus species isolates (S. aureus, 211 isolates; S. lugdunensis, 3 isolates; and Staphylococcus spp., 444 isolates) were recovered from monomicrobial and 33 polymicrobial blood cultures. After discrepant analysis, the overall ratios of Portrait Staph ID/R BCP positive percent agreement and negative percent agreement were 99.4%/99.9% for Staphylococcus ID and 99.7%/99.2% for mecA detection.


Subject(s)
Blood Culture/methods , Genes, Bacterial , Methicillin Resistance , Multiplex Polymerase Chain Reaction/methods , Staphylococcal Infections/diagnosis , Staphylococcus/classification , Staphylococcus/isolation & purification , Humans , Prospective Studies , Staphylococcal Infections/microbiology , Staphylococcus/genetics , Time Factors , United States
2.
J Pharmacol Toxicol Methods ; 70(2): 188-94, 2014.
Article in English | MEDLINE | ID: mdl-25150934

ABSTRACT

INTRODUCTION: Malaria is a major health concern and affects over 300million people a year. Accordingly, there is an urgent need for new efficacious anti-malarial drugs. A major challenge in developing new anti-malarial drugs is to design active molecules that have preferable drug-like characteristics. These "drug-like" characteristics include physiochemical properties that affect drug absorption, distribution, metabolism, and excretion (ADME). Compounds with poor ADME profiles will likely fail in vivo due to poor pharmacokinetics and/or other drug delivery related issues. There have been numerous assays developed in order to pre-screen compounds that would likely fail in further development due to poor absorption properties including PAMPA, Caco-2, and MDCK permeability assays. METHODS: The use of cell-based permeability assays such as Caco-2 and MDCK serve as surrogate indicators of drug absorption and transport, with the two approaches often used interchangeably. We sought to evaluate both approaches in support of anti-malarial drug development. Accordingly, a comparison of both assays was conducted utilizing apparent permeability coefficient (Papp) values determined from liquid chromatography/tandem mass spectrometry (LC-MS) analyses. RESULTS: Both Caco-2 and MDCK permeability assays produced similar Papp results for potential anti-malarial compounds with low and medium permeability. Differences were observed for compounds with high permeability and compounds that were P-gp substrates. Additionally, the utility of MDCK-MDR1 permeability measurements was demonstrated in probing the role of P-glycoprotein transport in Primaquine-Chloroquine drug-drug interactions in comparison with in vivo pharmacokinetic changes. DISCUSSION: This study provides an in-depth comparison of the Caco-2 and MDCK-MDR1 cell based permeability assays and illustrates the utility of cell-based permeability assays in anti-malarial drug screening/development in regard to understanding transporter mediated changes in drug absorption/distribution.


Subject(s)
Absorption, Physiological , Antimalarials/metabolism , Antimalarials/pharmacokinetics , Drug Evaluation, Preclinical/methods , Absorption, Physiological/drug effects , Animals , Antimalarials/chemistry , Caco-2 Cells , Cells, Cultured , Chromatography, Liquid , Dogs , Drug Delivery Systems , Drug Design , Humans , Madin Darby Canine Kidney Cells , Male , Mice , Mice, Inbred C3H , Permeability/drug effects , Tandem Mass Spectrometry
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