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1.
Environ Pollut ; 175: 1-7, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23291231

ABSTRACT

The use of accumulation bioindicator to assess metal bioavailability has mainly concerned individual species. This work addresses this issue at the plant community level. Metal content within different species from plant communities found at three contaminated and one uncontaminated site was compared. Results showed that for two contaminated sites, leaf metals concentrations were comparable to those in plants from control site, i.e. approx (mg/kg) 0.1 Cd, 0.2 Cr, 9.2 Cu, 1.8 Ni, 0.5 Pb and 42 Zn. Only plants from the third site showed higher metal contents, ranging from 1.5- to 8-fold those of the control community. This contrasted with ammonium acetate-EDTA extractions, which indicated a very high "availability" of metals at the three sites, as compared to the control site. Thus, metal content in plant communities provided accurate information on actual transfer toward the ensemble of vegetation, which could be used to establish site-specific "fingerprints" of metal bioavailability.


Subject(s)
Environmental Monitoring/methods , Metals/metabolism , Plants/metabolism , Soil Pollutants/metabolism , Metals/analysis , Soil/chemistry , Soil Pollutants/analysis
2.
Mol Ecol ; 16(18): 3955-69, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17850556

ABSTRACT

The detection of adaptive loci in the genome is essential as it gives the possibility of understanding what proportion of a genome or which genes are being shaped by natural selection. Several statistical methods have been developed which make use of molecular data to reveal genomic regions under selection. In this paper, we propose an approach to address this issue from the environmental angle, in order to complement results obtained by population genetics. We introduce a new method to detect signatures of natural selection based on the application of spatial analysis, with the contribution of geographical information systems (GIS), environmental variables and molecular data. Multiple univariate logistic regressions were carried out to test for association between allelic frequencies at marker loci and environmental variables. This spatial analysis method (SAM) is similar to current population genomics approaches since it is designed to scan hundreds of markers to assess a putative association with hundreds of environmental variables. Here, by application to studies of pine weevils and breeds of sheep we demonstrate a strong correspondence between SAM results and those obtained using population genetics approaches. Statistical signals were found that associate loci with environmental parameters, and these loci behave atypically in comparison with the theoretical distribution for neutral loci. The contribution of this new tool is not only to permit the identification of loci under selection but also to establish hypotheses about ecological factors that could exert the selection pressure responsible. In the future, such an approach may accelerate the process of hunting for functional genes at the population level.


Subject(s)
Adaptation, Biological , Genomics/methods , Sheep/genetics , Weevils/genetics , Animals , Gene Frequency , Genetic Markers , Geographic Information Systems , Microsatellite Repeats , Polymorphism, Genetic , Regression Analysis , Selection, Genetic , Sequence Analysis, DNA
3.
Heredity (Edinb) ; 97(1): 46-55, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16705324

ABSTRACT

The distribution of genetic variation within and among 20 European sites infested by the large pine weevil, Hylobius abietis, was analysed using dominant amplified fragment length polymorphism markers. Analysis of molecular variance was performed at the European, regional and local scales. Most of the genetic variability was found within rather than among populations and the global fixation index averaged over loci was low (0.07). We found no evidence of genetic drift, even in relatively isolated sites. This genetic pattern tends to confirm the high dispersal ability of the weevil and the influence of human-mediated expansion of its range through conifer plantations across Europe since the 19th century. Assignment tests demonstrated that the regional forest is a pertinent geographic scale for defining populations in the large pine weevil. Testing the potential influence of the larval host-plant identity (Scot Pine vs Norway Spruce) on the genetic structure revealed a weak but significant effect in two of the three regions tested (in Ardèche and in Limousin but not in Finland). One locus varied with host-plant use in the two French regions, indicating a potential role in host-plant adaptation. However, host-race formation is not observed in H. abietis; we discuss this result in the light of our current knowledge of this insect's biology. Altogether, this study shows that the use of different host plants for development does not constitute a strong barrier to gene flow for H. abietis and confirms the high dispersal ability of this forest pest.


Subject(s)
Tracheophyta/parasitology , Weevils/genetics , Analysis of Variance , Animals , Europe , Gene Flow , Genetic Variation , Geography , Host-Parasite Interactions , Larva/genetics , Phylogeny , Polymerase Chain Reaction , Polymorphism, Genetic , Selection, Genetic , Trees/parasitology
4.
Hum Reprod ; 19(9): 1979-84, 2004 Sep.
Article in English | MEDLINE | ID: mdl-15192072

ABSTRACT

BACKGROUND: When administered in the late follicular phase to prevent an LH surge, GnRH antagonists induce a sharp decrease in serum LH levels that may be detrimental for assisted reproductive technology cycle outcome. Therefore, a prospective study was designed to assess the effects of recombinant human (r)LH supplementation during GnRH antagonist (cetrorelix) administration. METHODS: The protocol consisted of cycle programming with oral contraceptive pill, ovarian stimulation with rFSH and flexible administration of a single dose of cetrorelix (3 mg). A total of 218 patients from three IVF centres were randomized (by sealed envelopes or according to woman's birth date) to receive (n = 114) or not (n = 104) a daily injection of rLH 75 IU from GnRH antagonist initiation to hCG injection. RESULTS: The only significant difference was a higher serum peak E2 level in patients treated with rLH (1476 +/- 787 versus 1012 +/- 659 pg/ml, P < 0.001) whereas the numbers of oocytes and embryos as well as the delivery rate (25.2 versus 24%) and the implantation rate per embryo (19.1 versus 17.4%) were similar in both groups. CONCLUSIONS: These results show that in an unselected group of patients, there is no evident benefit to supplement GnRH antagonist-treated cycles with rLH.


Subject(s)
Fertilization in Vitro , Gonadotropin-Releasing Hormone/analogs & derivatives , Gonadotropin-Releasing Hormone/antagonists & inhibitors , Gonadotropin-Releasing Hormone/therapeutic use , Hormone Antagonists/therapeutic use , Luteinizing Hormone/therapeutic use , Sperm Injections, Intracytoplasmic , Adult , Cell Count , Delivery, Obstetric/statistics & numerical data , Embryo Implantation/drug effects , Embryo, Mammalian/drug effects , Estradiol/blood , Female , Humans , Oocytes/cytology , Oocytes/drug effects , Prospective Studies , Recombinant Proteins/therapeutic use , Treatment Outcome
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