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1.
Chest ; 144(3): 758-765, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23412642

ABSTRACT

BACKGROUND: Evaluation of cardiovascular safety for new therapies for COPD is important because of a high prevalence of cardiac comorbidities in the COPD population. Hence, we evaluated the effects of roflumilast, a novel oral phosphodiesterase 4 inhibitor developed for the treatment and prevention of COPD exacerbations, on major adverse cardiovascular events (MACEs). METHODS: Intermediate- and long-term placebo-controlled clinical trials of roflumilast in COPD were pooled and assessed for potential cardiovascular events. Studies comprised 14 12- to 52-week placebo-controlled trials in patients with moderate to very severe COPD. All deaths and serious nonfatal cardiovascular events were evaluated by an independent adjudication committee blinded to study and treatment. The MACE composite of cardiovascular death, nonfatal myocardial infarction, and stroke was analyzed according to treatment group. RESULTS: Of 6,563 patients receiving roflumilast, 52 experienced MACEs (14.3 per 1,000 patient-years), and of 5,491 patients receiving placebo, 76 experienced MACEs (22.3 per 1,000 patient-years). The MACE composite rate was significantly lower for roflumilast compared with placebo (hazard ratio, 0.65; 95% CI, 0.45-0.93; P = .019). CONCLUSIONS: A lower rate of cardiovascular events was observed with roflumilast than with placebo in patients with COPD, indicating the lack of a cardiovascular safety signal when treating patients with COPD. Potential cardiovascular benefits of roflumilast should be evaluated in future controlled clinical trials.


Subject(s)
Aminopyridines/administration & dosage , Benzamides/administration & dosage , Cardiovascular Diseases/complications , Pulmonary Disease, Chronic Obstructive/drug therapy , Adult , Aged , Aged, 80 and over , Cardiovascular Diseases/epidemiology , Cardiovascular Diseases/prevention & control , Cyclopropanes/administration & dosage , Disease Progression , Dose-Response Relationship, Drug , Female , Follow-Up Studies , Forced Expiratory Volume , Humans , Male , Middle Aged , Phosphodiesterase 4 Inhibitors , Prevalence , Prospective Studies , Pulmonary Disease, Chronic Obstructive/complications , Pulmonary Disease, Chronic Obstructive/physiopathology , Switzerland/epidemiology , Treatment Outcome
2.
PLoS One ; 8(1): e54008, 2013.
Article in English | MEDLINE | ID: mdl-23349778

ABSTRACT

BACKGROUND: The role of viral infections in the pathogenesis of atherosclerosis remains controversial largely due to inconsistent detection of the virus in atherosclerotic lesions. However, viral infections elicit a pro-inflammatory cascade known to be atherogenic and to precipitate acute ischemic events. We have published in vitro data that provide the foundation for a mechanism that reconciles these conflicting observations. To determine the relation between an early viral protein, deoxyuridine triphosphate nucleotidohydrolase (dUTPase), produced following reactivation of Epstein Barr Virus (EBV) to circulating pro-inflammatory cytokines, intercellular adhesion molecule-1 (ICAM-1) and acute coronary events. METHODOLOGY/PRINCIPAL FINDINGS: Blood samples were obtained from 299 patients undergoing percutaneous coronary intervention for stable angina (SA), unstable angina (UA), or acute myocardial infarction (AMI). Plasma concentrations of pro-inflammatory cytokines and neutralizing antibody against EBV-encoded dUTPase were compared in the three patient groups. AMI was associated with the highest measures of interleukin-6 (ANOVA p<0.05; 4.6 ± 2.6 pg/mL in patients with AMI vs. 3.2 ± 2.3 pg/mL in SA). ICAM-1 was significantly higher in patients with AMI (ANOVA p<0.05; 304 ± 116 pg/mL in AMI vs. 265 ± 86 pg/mL SA). The highest values of ICAM-1 were found in patients having an AMI and who were antibody positive for dUTPase (ANOVA p=0.008; 369 ± 183 pg/mL in AMI and positive for dUTPase vs. 249 ± 70 pg/mL in SA negative for dUTPase antibody). CONCLUSIONS/SIGNIFICANCE: These clinical data support a model, based on in vitro studies, by which EBV may precipitate AMI even under conditions of low viral load through the pro-inflammatory action of the early protein dUTPase that is produced even during incomplete viral replication. They further support the putative role of viral infections in the pathogenesis of atherosclerosis and coronary artery events.


Subject(s)
Cardiovascular Diseases/blood , Epstein-Barr Virus Infections/blood , Herpesvirus 4, Human/metabolism , Intercellular Adhesion Molecule-1/blood , Pyrophosphatases/blood , Aged , Analysis of Variance , Angina Pectoris/blood , Angina Pectoris/surgery , Angina Pectoris/virology , Angina, Unstable/blood , Angina, Unstable/surgery , Angina, Unstable/virology , Antibodies, Neutralizing/blood , Antibodies, Neutralizing/immunology , Cardiovascular Diseases/surgery , Cardiovascular Diseases/virology , Epstein-Barr Virus Infections/surgery , Epstein-Barr Virus Infections/virology , Female , Herpesvirus 4, Human/physiology , Host-Pathogen Interactions , Humans , Inflammation Mediators/blood , Interleukin-6/blood , Male , Middle Aged , Myocardial Infarction/blood , Myocardial Infarction/surgery , Myocardial Infarction/virology , Percutaneous Coronary Intervention , Pyrophosphatases/immunology , Viral Proteins/blood , Viral Proteins/immunology
3.
Future Cardiol ; 4(1): 19-21, 2008 Jan.
Article in English | MEDLINE | ID: mdl-19804269

ABSTRACT

The risk of coronary heart disease (CHD) events increases in women after menopause and it was thought that hormone therapy (HT) would decrease this risk. However, numerous large randomized clinical trials have not demonstrated decreased risk in secondary prevention and some have actually shown increased risk of cardiovascular events with HT in primary prevention. Platelets are involved in CHD events and platelet glycoprotein single-nucleotide polymorphisms may help to identify risk and treatment efficacy. It may become a plausible strategy in the future for clinicians to identify, by genotyping, high-risk patients who would benefit from HT to reduce CHD risk as well as to identify patients with neutral risk for whom HT could be harmful.

4.
Am Heart J ; 155(1): 69-74, 2008 Jan.
Article in English | MEDLINE | ID: mdl-18082492

ABSTRACT

BACKGROUND: This investigation was designed to identify clinical variables associated with recovery of normal ventricular function in patients with dilated cardiomyopathy treated with medical therapy. Recovery of normal ventricular function with medical treatment of patients with dilated cardiomyopathy is observed with increasing frequency. However, the clinical variables associated with such dramatic improvement of ventricular performance are poorly defined. METHODS: Fifty-three patients with dilated cardiomyopathy and reduced ejection fractions who achieved an increase in ejection fraction to > or = 40% with medical therapy were identified during follow-up in a dedicated heart failure clinic. A cohort of patients frequency-matched on baseline ejection fraction who did not recover ventricular systolic function to this magnitude constituted the control group. Clinical variables characterizing the 2 groups were compared by univariable analysis. Variables that significantly differed between the 2 groups were entered in a stepwise logistic regression analysis to identify factors independently associated with recovery of ejection fraction to > or = 40%. RESULTS: In the final logistic regression model, QRS duration, sex, etiology of cardiomyopathy, diabetes, and systolic blood pressure were significantly associated with improvement of ejection fraction to > or = 40%. CONCLUSIONS: Five clinical variables that are independently associated with improvement of left ventricular ejection fraction to normal or near-normal values with medical therapy alone were identified by this modeling process. These variables may be used to discriminate between patients in whom ventricular function will normalize with medical therapy alone and those who will require more aggressive pharmacologic or device therapy.


Subject(s)
Cardiomyopathy, Dilated/diagnosis , Cardiomyopathy, Dilated/drug therapy , Cardiotonic Agents/therapeutic use , Stroke Volume/physiology , Ventricular Function, Left/physiology , Adult , Age Factors , Analysis of Variance , Cardiomyopathy, Dilated/mortality , Case-Control Studies , Cohort Studies , Female , Heart Function Tests , Hemodynamics , Humans , Logistic Models , Male , Middle Aged , Predictive Value of Tests , Prognosis , ROC Curve , Recovery of Function , Risk Assessment , Severity of Illness Index , Sex Factors , Survival Rate , Treatment Outcome
5.
Pharmacogenomics ; 8(12): 1723-34, 2007 Dec.
Article in English | MEDLINE | ID: mdl-18086002

ABSTRACT

Nitric oxide functions as a signaling molecule with a well-established role in vascular homeostasis. It is synthesized from the oxidation of L-arginine by the enzyme, endothelial nitric oxide synthase (eNOS). The eNOS gene has a number of polymorphic sites, including SNPs, dinucleotide repeats and variable number tandem repeat sequences, and the opportunity exists to investigate polymorphic functional correlates as well as disease-specific associations, especially in cardiovascular disease, including coronary artery disease, and its most severe consequence, myocardial infarction. A number of clinical and functional correlative studies involving eNOS polymorphisms have been reported and are presented. The promise and complexity of pharmacogenetics is illustrated using eNOS as an example because of its relationship with cardiovascular biology and pathology. In this review, we will discuss the impact of nitric oxide, eNOS, genetic regulation, clinical investigation and, ultimately, prospects for treatment of heart disease.


Subject(s)
Heart Diseases/therapy , Nitric Oxide Synthase Type III/genetics , Animals , Exons , Haplotypes , Heart Diseases/enzymology , Heart Diseases/genetics , Humans , Introns , Pharmacogenetics , Polymorphism, Single Nucleotide , Promoter Regions, Genetic
6.
AMIA Annu Symp Proc ; : 1037, 2007 Oct 11.
Article in English | MEDLINE | ID: mdl-18694135

ABSTRACT

Single Nucleotide Polymorphisms (SNPs) may be the key to diagnosing and treating certain diseases. A preliminary study was conducted at The Ohio State University Medical Center Information Warehouse to correlate such SNPs with a selected group of lab values for cardiology patients. Early results show that data mining tools can be valuable for understanding such correlations, but further refinement of the methodology and data preparation is needed to fully realize such value.


Subject(s)
Cardiovascular Diseases/genetics , Information Storage and Retrieval , Phenotype , Polymorphism, Single Nucleotide , C-Reactive Protein/analysis , Cardiovascular Diseases/blood , Genotype , Humans , Lipids/blood
7.
J Heart Lung Transplant ; 25(11): 1363-6, 2006 Nov.
Article in English | MEDLINE | ID: mdl-17097502

ABSTRACT

Cardiac transplant recipients develop coronary artery disease in the form of cardiac allograft vasculopathy (CAV), and still undergo annual left heart catheterizations for detection at most centers. We prospectively enrolled 20 cardiac transplant recipients scheduled for annual left heart catheterization with X-ray coronary angiography (XRA) to also undergo electrocardiographically gated coronary computed tomography angiography (CTA), which was performed on a 64-detector computed tomography scanner. CTA detected more CAV vs XRA in 4 patients and less CAV in 0 patient, resulting in good overall agreement between the two modalities (kappa = 0.69). CTA may be superior to conventional catheter-based angiography to identify non-obstructive vessel wall disease that may go unrecognized with catheter-based angiography alone.


Subject(s)
Coronary Angiography/methods , Coronary Disease/diagnostic imaging , Coronary Disease/pathology , Heart Transplantation/pathology , Tomography, X-Ray Computed/methods , Transplantation/pathology , Adult , Aged , Aged, 80 and over , Cardiac Catheterization , Disease Progression , Female , Follow-Up Studies , Humans , Male , Middle Aged , Myocardium/pathology , Prospective Studies
8.
Expert Opin Drug Saf ; 5(6): 815-26, 2006 Nov.
Article in English | MEDLINE | ID: mdl-17044808

ABSTRACT

The use of aspirin and clopidogrel in combination has become part of the standard clinical care of patients with coronary artery disease. The use of this combination provides significant benefits compared with the use of aspirin alone in patients with acute coronary syndromes, and in patients treated with percutaneous coronary intervention with stent placement (both bare metal and drug-eluting stents). Clinical trials have demonstrated significant efficacy of this dual therapy; however, there is the potential for significant bleeding complications from the synergistic antiplatelet effects. In total, it appears that when there is vessel injury (mechanical from perctutaneous coronary intervention or a ruptured plaque), dual antiplatelet therapy with aspirin and clopidogrel results in improved outcomes, albeit with a small but significant inherent risk of increased bleeding.


Subject(s)
Aspirin/adverse effects , Aspirin/therapeutic use , Coronary Disease/drug therapy , Platelet Aggregation Inhibitors/adverse effects , Platelet Aggregation Inhibitors/therapeutic use , Ticlopidine/analogs & derivatives , Clopidogrel , Coronary Disease/epidemiology , Coronary Disease/prevention & control , Drug Therapy, Combination , Humans , Ticlopidine/adverse effects , Ticlopidine/therapeutic use
9.
Am Heart J ; 152(1): 136-9, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16824843

ABSTRACT

BACKGROUND: The platelet glycoprotein IIb/IIIa receptor is a key mediator of platelet aggregation and intracoronary thrombosis. Studies have suggested that hormone replacement therapy (HRT) may increase coronary events in postmenopausal women. OBJECTIVES: We sought to characterize the relationship between the estrogen concentration expected in HRT and platelet aggregation. DESIGN AND RESULTS: Platelet aggregation studies were performed using epinephrine on 30 healthy individuals (15 Pl(A1/A1) and 15 Pl(A1/A2)) before and after incubation with beta-estradiol (E2) (10(-11) mol/L). The effect of E2 10(-11) mol/L on Pl(A1/A1) platelets demonstrated a significant increase (P = .03) in aggregation compared with baseline. In contrast, with the same concentration of E2, aggregation of Pl(A1/A2) platelets decreased significantly compared with baseline (P < .0001). CONCLUSIONS: Estrogen concentration similar to that expected in HRT resulted in an increase in platelet aggregation in Pl(A1/A1) individuals, but not in Pl(A1/A2) individuals. The data may provide further insight for the increase in coronary events seen in HRT clinical trials and suggest that further evaluation is needed to better define the role of pharmacogenetics in HRT.


Subject(s)
Antigens, Neoplasm/physiology , Estradiol/pharmacology , Estrogen Replacement Therapy , Platelet Aggregation/drug effects , Blood Platelets/drug effects , Dose-Response Relationship, Drug , Epinephrine/pharmacology , Estradiol/genetics , Estradiol/physiology , Female , Genotype , Humans , Integrin beta3 , Male , Middle Aged , Platelet Aggregation/genetics , Platelet Aggregation/physiology , Platelet Aggregation Inhibitors/pharmacology , Postmenopause/physiology
10.
J Am Coll Cardiol ; 47(3): 541-6, 2006 Feb 07.
Article in English | MEDLINE | ID: mdl-16458133

ABSTRACT

OBJECTIVES: We studied the modifier effect of platelet antigen polymorphism (PlA2) on platelet inhibition by acetylsalicylic acid (ASA, i.e., aspirin), clopidogrel, or their combination in patients with coronary heart disease. BACKGROUND: Clopidogrel, when administered with ASA, was shown to significantly improve the outcome of patients with acute coronary syndromes compared with patients receiving only ASA. We have shown previously that the effect of ASA on platelets is modified by the glycoprotein IIIa single nucleotide polymorphism PlA2. Hence, an important pharmacogenetic question remains whether the antiplatelet effect of clopidogrel is uniform for all patients or, like acetylsalicylic acid, more selective. METHODS: Thirty PlA1/A1 and 30 PlA1/A2 patients were assigned randomly to ASA 325 mg/day, clopidogrel 75 mg/day, or both. After 10 days, platelet function was studied. RESULTS: Clopidogrel provided stronger platelet inhibition than ASA with adenosine diphosphate as the agonist, and combination therapy resulted in greater inhibition than either inhibitor used alone (p < 0.0001). The use of ASA resulted in greater inhibition compared with clopidogrel with epinephrine (p < 0.0001) and collagen as agonists (p < 0.0001). With collagen as the agonist, platelets from PlA1/A2 donors were markedly and significantly less inhibited by ASA (p = 0.005). In contrast, with clopidogrel, no significant difference could be detected between inhibition of Pl(A1/A1) and Pl(A1/A2) platelets. CONCLUSIONS: The combination of ASA and clopidogrel appears superior to either agent alone in inhibiting platelet function. Pl(A2) functions as an important modifier for platelet responsiveness to ASA but not to clopidogrel. These findings could have significant impact on the future design of pharmacogenetic antithrombotic strategies for patients with coronary heart disease.


Subject(s)
Antigens, Human Platelet/genetics , Aspirin/therapeutic use , Coronary Artery Disease/drug therapy , Platelet Aggregation Inhibitors/therapeutic use , Platelet Aggregation/drug effects , Polymorphism, Genetic , Ticlopidine/analogs & derivatives , Adenosine Diphosphate/pharmacology , Aspirin/administration & dosage , Blood Platelets/metabolism , Clopidogrel , Collagen/pharmacology , Coronary Artery Disease/blood , Coronary Artery Disease/genetics , Cytoplasmic Granules/metabolism , Epinephrine/pharmacology , Humans , Platelet Glycoprotein GPIIb-IIIa Complex/metabolism , Ticlopidine/administration & dosage , Ticlopidine/therapeutic use
11.
Vascul Pharmacol ; 44(2): 66-74, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16376619

ABSTRACT

We now have a greater understanding of the workings of the human genome as well as a wide assortment of pharmacological and mechanical therapies that clearly improve mortality and quality of life for our patients with cardiovascular disease, but these areas of therapeutics and genomics have essentially advanced independently with little interaction up until recently. Pharmacogenetics is the study of the effect of a medication as it relates to single or defined sets of genes. A major goal will be to integrate the two so that true personalized therapy can be delivered. This review explores the clinical implications of the complex interactions in multigenic disease and pharmacology with examples of atherosclerosis and heart failure. The therapies of today are the direct result of understanding the epidemiological, molecular and genetic basis of cardiovascular disease with the application to clinical practice. The complexity of multigenic disease and the promise of pharmacogenetics will require that we improve on the methods of drug evaluation and this includes the need for new statistical methods, bioinformatics, and novel clinical trial design with sufficient power to detect differences in therapy. There must be a continued effort to apply biological and mechanistic plausibility in understanding disease and pharmacology but openness to new ideas and concepts, especially in understanding the workings of the genome.


Subject(s)
Coronary Artery Disease/genetics , Heart Diseases/genetics , Antigens, Human Platelet/genetics , Antioxidants/therapeutic use , Coronary Artery Disease/drug therapy , Coronary Artery Disease/prevention & control , Drug Design , Estrogen Replacement Therapy/adverse effects , Heart Diseases/drug therapy , Heart Diseases/prevention & control , Humans , Integrin beta3/genetics , Peptidyl-Dipeptidase A/genetics , Pharmacogenetics , Platelet Aggregation Inhibitors/therapeutic use , Polymorphism, Genetic , Randomized Controlled Trials as Topic , Receptors, Adrenergic, beta/genetics , Stents/adverse effects , Thromboembolism/genetics , Vasodilator Agents/therapeutic use
12.
Congenit Heart Dis ; 1(4): 169-74, 2006 Jul.
Article in English | MEDLINE | ID: mdl-18377542

ABSTRACT

OBJECTIVE: Down syndrome patients are at increased risk for developing pulmonary hypertension (PHTN). Nitric oxide (NO) is an important factor for pulmonary vasoreactivity. Various endothelial nitric oxide synthase (eNOS) polymorphisms have been shown to affect NO. The goal of this study was to determine whether there was a difference in prevalence of eNOS polymorphisms between Down syndrome patients vs. non-Down syndrome patients. METHODS: Down syndrome patients were recruited as well as non-Down syndrome patients. Gene polymorphisms for eNOS-3 (GG, GT, TT), eNOS-4 (bb, ba, aa), and eNOS-P (TT, TC, CC) were determined. Three forms of the 3 genes were compared in cross-tabulation tables with Down syndrome patients vs. non-Down syndrome patients and Down syndrome patients with heart defects vs. those without defects. Association was tested with chi-square and significance was set at P < or = .05. RESULTS: Fifty-one Down syndrome patients and 411 controls were studied. Twenty-one Down syndrome patients had heart defects and 6 of these patients had documented PHTN. There was no difference in gender between Down syndrome patients (males 56.9%) and controls (males 50.4%), P = .38. Prevalence of eNOS polymorphisms between Down syndrome patients and controls was not different for the genes (eNOS-3, P = .94; eNOS-4, P = .40; eNOS-P, P = .18). There was no difference in gene polymorphisms between Down syndrome patients with heart defects vs. those without defects (eNOS-3, P = .19; eNOS-4, P = .29; eNOS-P, P = .99). CONCLUSION: Prevalence of various eNOS polymorphisms between Down syndrome patients and controls was not different. Other polymorphisms that are associated with PHTN should be studied to determine whether they may be the cause of the increased risk of PHTN in Down syndrome patients.


Subject(s)
Down Syndrome/complications , Down Syndrome/genetics , Gene Frequency , Hypertension, Pulmonary/complications , Hypertension, Pulmonary/genetics , Nitric Oxide Synthase Type III/genetics , Polymorphism, Genetic , Child , Child, Preschool , Female , Genetic Predisposition to Disease/epidemiology , Heart Defects, Congenital/complications , Heart Defects, Congenital/genetics , Humans , Male , Nitric Oxide/biosynthesis , Prevalence
13.
Am Heart J ; 149(2): 342-8, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15846275

ABSTRACT

BACKGROUND: In addition to its well-recognized role in the regulation of vascular tone, nitric oxide modulates sympathetic and parasympathetic nervous system activities. Abnormalities of both autonomic control and nitric oxide synthase activity are known to occur in patients with congestive heart failure. Recently, a polymorphism of the promoter of the endothelial nitric oxide synthase (eNOS) gene has been associated with a reduction of eNOS activity. This study tested the hypothesis that patients with congestive heart failure who are homozygous for this polymorphism will have a more advanced imbalance of autonomic activity. METHODS: Patients who have congestive heart failure were tested for the presence of an eNOS promoter polymorphism (thymidine to cytosine transition [T(-786)C]). Spectral analysis of heart rate variability was performed to quantify sympathetic and parasympathetic autonomic activity, which were compared between subjects homozygous for the polymorphism and all other subjects. RESULTS: Patients homozygous for the polymorphism of the eNOS promoter had a greater autonomic imbalance as reflected by significant differences in high- and low-frequency heart rate variability. These differences in autonomic function were noted in the absence of intergroup differences in patterns of respiratory variability, demographic features, and despite a higher mean ejection fraction in patients homozygous for the polymorphism. CONCLUSIONS: Patients with congestive heart failure who are homozygous for this polymorphism of the eNOS promoter were found to have a more advanced autonomic imbalance. This polymorphism may serve as a marker for patients at increased risk for sudden death and more rapid progression of disease.


Subject(s)
Autonomic Nervous System/physiopathology , Heart Failure/genetics , Heart Rate/physiology , Nitric Oxide Synthase/genetics , Polymorphism, Genetic , Female , Heart Failure/physiopathology , Homozygote , Humans , Male , Middle Aged , Nitric Oxide Synthase Type III , Promoter Regions, Genetic , Respiratory Physiological Phenomena
14.
Congest Heart Fail ; 10(6): 274-78; quiz 279-80, 2004.
Article in English | MEDLINE | ID: mdl-15591841

ABSTRACT

A vast array of gene polymorphisms have been described, and further discovery of these gene variants will continue as the human genome is defined. Therefore, selection of a single polymorphism to investigate in relation to disease evolution or outcome must be motivated by specific physiologic, pathophysiologic, or epidemiologic associations. A significant gene polymorphism may result in an alteration of protein function, or be associated with disease incidence or outcome. Prevalence of the polymorphism in the general population is of extreme importance, as it must be common enough to warrant interest in its clinical impact. The polymorphism of the gene encoding for the enzyme adenosine monophosphate deaminase 1 results in an abnormal protein necessary in skeletal muscle metabolism. While its physiologic effects are not completely understood, it has been associated with improved morbidity and mortality in patients with cardiovascular disease.


Subject(s)
AMP Deaminase/genetics , Heart Failure/genetics , Polymorphism, Genetic , Humans
16.
Biotechniques ; 34(5): 1068-72, 2003 May.
Article in English | MEDLINE | ID: mdl-12765033

ABSTRACT

We present a PCR method for identification of single nucleotide polymorphisms (SNPs), using allele-specific primers designed for selective amplification of each allele. Matching the SNP at the 3' end of the forward or reverse primer, and additionally incorporating a 3' mismatch to prevent amplification of the incorrect allele, results in selectivity of the allele-specific primers. DNA melting analysis with fluorescent SYBR Green affords detection of the PCR products. By incorporating a GC-rich sequence into one of the two allele-specific primers to increase the melting temperature, both alleles can be measured simultaneously at their respective melting temperatures. Applying the DNA melting analysis to SNPs in ApoE and ABCA1 yielded results identical to those obtained with other genotyping methods. This provides a cost-effective, high-throughput method for amplification and scoring of SNPs.


Subject(s)
ATP-Binding Cassette Transporters/genetics , Alleles , Apolipoproteins E/genetics , Gene Expression Profiling/methods , Polymerase Chain Reaction/methods , Polymorphism, Single Nucleotide/genetics , Spectrometry, Fluorescence/methods , ATP Binding Cassette Transporter 1 , ATP-Binding Cassette Transporters/chemistry , Apolipoproteins E/chemistry , Genotype , Hot Temperature , Transition Temperature
17.
Stat Med ; 22(10): 1741-60, 2003 May 30.
Article in English | MEDLINE | ID: mdl-12720308

ABSTRACT

The Pl(A2) polymorphism of the glycoprotein IIIa subunit of the fibrinogen receptor (GPIIb-IIIa) has been reported by some studies to be associated with an increased risk of coronary thrombosis. Following the first paper on the subject in 1996, a large number of studies have investigated the relationship between this polymorphism and coronary thrombosis, either at the epidemiological or at the cellular and molecular levels. The cellular and molecular studies have shown in a consistent manner that this polymorphism increases platelet responsiveness. In contrast, epidemiological studies have generated inconsistent results regarding the clinical impact of Pl(A2). We consider 12 epidemiological studies that investigate the link between presence/absence of this polymorphism and presence/absence of coronary heart disease. Each is a case-control study that reports an odds ratio. The studies are not directly comparable because they differ greatly in their patient pools and also in the way the data are analysed. We present several meta-analyses of these 12 studies. The simplest one is based on a standard frequentist random effects model with a normal distribution for the study effects (the per-study population log-odds ratios). We also consider a Bayesian version of this model, with a diffuse prior for the mean and variance of the normal distribution of the study effects. The conclusions from both of these analyses is about the same, and is that there is evidence that the Pl(A2) polymorphism is associated with an increased risk of coronary heart disease. A look at the reported log-odds ratios across studies suggests that the study effects do not come from a symmetric distribution. For this reason, we also consider semi-parametric priors for the distribution of the study effects. These priors are specifically designed for this kind of meta-analysis, and are based on a certain class of mixtures of Dirichlet priors. They can be designed to concentrate most of their mass around the family of normal distributions, but still allow for any other distribution. The semi-parametric Bayesian model continues to give evidence of an association between the Pl(A2) polymorphism and the risk of coronary heart disease.


Subject(s)
Bayes Theorem , Coronary Disease/genetics , Platelet Glycoprotein GPIb-IX Complex/genetics , Polymorphism, Genetic/genetics , Case-Control Studies , Humans , Odds Ratio , Risk Factors
18.
Am Heart J ; 145(1): 118-24, 2003 Jan.
Article in English | MEDLINE | ID: mdl-12514663

ABSTRACT

BACKGROUND: Although inherited thrombophilias are more common in patients with venous thromboembolism, their influence on the development of myocardial infarction (MI) requires clarification. METHODS AND RESULTS: To determine whether there are increased frequencies of mutations/polymorphisms in 14 genes potentially causing thrombophilia in patients with no flow-limiting stenoses after MI compared with patients with > or =1 flow-limiting stenosis of >50%, we studied 395 patients (60 with no flow-limiting stenosis) who underwent angiography at approximately 1 month. The mutations/polymorphisms studied included Factor V Leiden, prothrombin variant G20210A, beta-fibrinogen 448 (G/A), endothelial protein C receptor (23-base pair insertion), methyl tetrahydrofolate reductase 677 (C/T), platelet glycoprotein IIIa PlA1/A2, plasminogen activator inhibitor-1 4G/5G, angiotensin II type 1 receptor (A/C), hemochromatosis gene 282 (G/A), nitric oxide synthase (NOS) (3 forms: eNOS, eNOS3, eNOS4), p22 phox of NADPH oxidase C242T, and angiotensin-converting enzyme insertion/deletion polymorphism. The frequencies of Factor V Leiden and the beta-fibrinogen 448 A allele were higher in patients with no flow-limiting stenosis than in patients with > or =1 stenosis (11.7% vs 3.6%, odds ratio [OR] 3.6, 95% CI 1.3-9.4, P =.015; and 42% vs 27%, OR 2.0, 95% CI 1.1-3.5, P =.018, respectively), and there was a trend toward an increased frequency of prothrombin variant G20210A (6.7% vs 2.1%, OR 3.4, 95% CI 0.95-11.8, P =.069). However, in patients with no flow-limiting stenosis after MI the frequencies of the other gene mutations/polymorphisms were not increased. Also, there were no significant interactions between any of these 14 mutation/polymorphisms, major cardiovascular risk factors, and the absence of any flow-limiting stenosis, except for Factor V Leiden and hypertension (OR 6.34, 95% CI 2.67-100, P =.004). CONCLUSIONS: Patients with no flow-limiting stenosis after MI had increased frequencies of 2 inherited thrombophilias (Factor V Leiden and beta-fibrinogen 448 A allele), and there was a trend toward an increased frequency of prothrombin variant G20210A compared with patients with > or =1 stenosis. These data suggest that polymorphisms/mutations in some gene products influencing coagulation may influence the pathogenesis of MI.


Subject(s)
Factor V/genetics , Fibrinogen/genetics , Mutation , Myocardial Infarction/genetics , Adult , Coronary Stenosis/complications , Coronary Stenosis/genetics , Female , Gene Frequency , Humans , Male , Middle Aged , Myocardial Infarction/complications , Polymorphism, Genetic , Risk Factors , Thrombophilia/complications , Thrombophilia/genetics
19.
Proc Natl Acad Sci U S A ; 99(21): 13795-800, 2002 Oct 15.
Article in English | MEDLINE | ID: mdl-12374865

ABSTRACT

Studies in humans and in experimental models of HIV-1 infection indicate an important role for monocyte chemoattractant protein-1 (MCP-1; also known as CC chemokine ligand 2), a potent chemoattractant and activator of mononuclear phagocytes (MP) in the pathogenesis of HIV-associated dementia (HAD). We determined the influence of genetic variation in MCP-1 on HIV-1 pathogenesis in large cohorts of HIV-1-infected adults and children. In adults, homozygosity for the MCP-1 -2578G allele was associated with a 50% reduction in the risk of acquiring HIV-1. However, once HIV-1 infection was established, this same MCP-1 genotype was associated with accelerated disease progression and a 4.5-fold increased risk of HAD. We examined the molecular and cellular basis for these genotype-phenotype associations and found that the mutant MCP-1 -2578G allele conferred greater transcriptional activity via differential DNA-protein interactions, enhanced protein production in vitro, increased serum MCP-1 levels, as well as MP infiltration into tissues. Thus, MCP-1 expression had a two-edged role in HIV-1 infection: it afforded partial protection from viral infection, but during infection, its proinflammatory properties and ability to up-regulate HIV-1 replication collectively may contribute to accelerated disease progression and increased risk of dementia. Our findings suggest that MCP-1 antagonists may be useful in HIV-1 infection, especially for HAD, and that HIV+ individuals possessing the MCP-1 -2578G allele may benefit from early initiation of antiretroviral drugs that effectively cross the blood-brain barrier. In a broader context, the MCP-1 -2578G allele may serve as a genetic determinant of outcome of other disease states in which MP-mediated tissue injury is central to disease pathogenesis.


Subject(s)
AIDS Dementia Complex/genetics , AIDS Dementia Complex/pathology , Chemokine CCL2/genetics , HIV Infections/genetics , HIV Infections/pathology , Monocytes/pathology , Mutation , AIDS Dementia Complex/metabolism , Adult , Alleles , Chemokine CCL2/metabolism , Child , Cohort Studies , Genetic Variation , Genotype , HIV Infections/metabolism , HIV-1 , Haplotypes , Humans , Phenotype , Polymorphism, Single Nucleotide , Risk Factors
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