Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 29
Filter
Add more filters










Publication year range
1.
Rev Sci Instrum ; 91(1): 016101, 2020 Jan 01.
Article in English | MEDLINE | ID: mdl-32012599

ABSTRACT

We describe an experimental system based on optical microscopy, permitting the analysis of the four dimensional structure of the flow inside evaporating sessile droplets by monitoring the motion of tracers in horizontal planes localized at different heights. Inter-plane particle identification is accomplished via 3D tracking algorithms. The multiple plane observation is achieved using a piezoelectric device to make the microscope objective oscillate vertically, while a high-speed camera captures images. The droplet evaporation process lasts several minutes and greatly accelerates as the fluid advances toward complete evaporation. In order to capture the dynamics of the whole process, two cameras with the same optical output but different temporal resolution are used sequentially. Using image processing algorithms, we obtain the full trajectories of multiple tracers, velocities of particles on the free surface of the droplets, and velocity fields. The information available may be used to understand the geometry of the sedimentation pattern.

2.
Biol Reprod ; 99(5): 1010-1021, 2018 11 01.
Article in English | MEDLINE | ID: mdl-29893793

ABSTRACT

Sperm motility is essential for fertilization. The asymmetry of flagellar beat in spermatozoa is finely regulated by intracellular calcium concentration ([Ca2+]i). Recently, we demonstrated that the application of high concentrations (10-20 µM) of the Ca2+ ionophore A23187 promotes sperm immobilization after 10 min, and its removal thereafter allows motility recovery, hyperactivation, and fertilization. In addition, the same ionophore treatment overcomes infertility observed in sperm from Catsper1-/-, Slo3-/-, and Adcy10-/-, but not PMCA4-/-, which strongly suggest that regulation of [Ca2+]i is mandatory for sperm motility and hyperactivation. In this study, we found that prior to inducing sperm immobilization, high A23187 concentrations (10 µM) increase flagellar beat. While 5-10 µM A23187 substantially elevates [Ca2+]i and rapidly immobilizes sperm in a few minutes, smaller concentrations (0.5 and 1 µM) provoke smaller [Ca2+]i increases and sperm hyperactivation, confirming that [Ca2+]i increases act as a motility switch. Until now, the [Ca2+]i thresholds that switch motility on and off were not fully understood. To study the relationship between [Ca2+]i and flagellar beating, we developed an automatic tool that allows the simultaneous measurement of these two parameters. Individual spermatozoa were treated with A23187, which is then washed to evaluate [Ca2+]i and flagellar beat recovery using the implemented method. We observe that [Ca2+]i must decrease below a threshold concentration range to facilitate subsequent flagellar beat recovery and sperm motility.


Subject(s)
Calcium/physiology , Sperm Motility/physiology , Sperm Tail/physiology , Animals , Calcimycin/pharmacology , Calcium/metabolism , Cells, Immobilized , In Vitro Techniques , Ionophores/pharmacology , Male , Mice , Microscopy, Fluorescence , Spermatozoa/drug effects , Spermatozoa/metabolism
3.
Mol Hum Reprod ; 23(9): 583-593, 2017 09 01.
Article in English | MEDLINE | ID: mdl-28911211

ABSTRACT

STUDY QUESTION: Are there intracellular Ca2+ ([Ca2+]i) oscillations correlated with flagellar beating in human sperm? SUMMARY ANSWER: The results reveal statistically significant [Ca2+]i oscillations that are correlated with the human sperm flagellar beating frequency, when measured in three-dimensions (3D). WHAT IS KNOWN ALREADY: Fast [Ca2+]i oscillations that are correlated to the beating flagellar frequency of cells swimming in a restricted volume have been detected in hamster sperm. To date, such findings have not been confirmed in any other mammalian sperm species. An important question that has remained regarding these observations is whether the fast [Ca2+]i oscillations are real or might they be due to remaining defocusing effects of the Z component arising from the 3D beating of the flagella. STUDY DESIGN, SIZE, DURATION: Healthy donors whose semen samples fulfill the WHO criteria between the age of 18-28 were selected. Cells from at least six different donors were utilized for analysis. Approximately the same number of experimental and control cells were analyzed. PARTICIPANTS/MATERIALS, SETTING, METHODS: Motile cells were obtained by the swim-up technique and were loaded with Fluo-4 (Ca2+ sensitive dye) or with Calcein (Ca2+ insensitive dye). Ni2+ was used as a non-specific plasma membrane Ca2+ channel blocker. Fluorescence data and flagella position were acquired in 3D. Each cell was recorded for up to 5.6 s within a depth of 16 microns with a high speed camera (coupled to an image intensifier) acquiring at a rate of 3000 frames per second, while an oscillating objective vibrated at 90 Hz via a piezoelectric device. From these samples, eight experimental and nine control sperm cells were analyzed in both 2D and 3D. MAIN RESULTS AND THE ROLE OF CHANCE: We have implemented a new system that allows [Ca2+]i measurements of the human sperm flagellum beating in 3D. These measurements reveal statistically significant [Ca2+]i oscillations that correlate with the flagellar beating frequency. These oscillations may arise from intracellular sources and/or Ca2+ transporters, as they were insensitive to external Ni2+, a non-specific plasma membrane Ca2+ channel blocker. LARGE SCALE DATA: N/A. LIMITATIONS REASONS FOR CAUTION: Analysis in 3D needs a very fast image acquisition rate to correctly sample a volume containing swimming sperm. This condition requires a very short exposure time per image making it necessary to use an image intensifier which also increases noise. The lengthy analysis time required to obtain reliable results limited the number of cells that could be analyzed. WIDER IMPLICATIONS OF THE FINDINGS: The possibility of recording flagellar [Ca2+]i oscillations described here may open a new avenue to better understand ciliary and flagellar beating that are fundamental for mucociliary clearance, oocyte transport, fertilization, cerebrospinal fluid pressure regulation and developmental left-right symmetry breaking in the embryonic node. STUDY FUNDING AND COMPETING INTEREST(S): This work was supported by Consejo Nacional de Ciencia y Tecnología (CONACyT) (grants 253952 to G.C.; 156667 to F.M.M. and Fronteras 71 39908-Q to A.D. and Post-doctoral scholarships 366844 to P.H.-H. and 291028 to F.M.) and the Dirección General de Asuntos del Personal Académico of the Universidad Nacional Autónoma de México (DGAPA-UNAM) (grants CJIC/CTIC/4898/2016 to F.M. and IN205516 to A.D.). There are no conflicts of interest to declare.


Subject(s)
Calcium Channels/physiology , Calcium/metabolism , Imaging, Three-Dimensional/methods , Sperm Motility/physiology , Sperm Tail/physiology , Spermatozoa/physiology , Adolescent , Adult , Aniline Compounds/chemistry , Calcium Channel Blockers/pharmacology , Calcium Signaling/drug effects , Calcium Signaling/physiology , Fluoresceins/chemistry , Fluorescent Dyes/chemistry , Humans , Imaging, Three-Dimensional/instrumentation , Male , Nickel/pharmacology , Sperm Motility/drug effects , Sperm Tail/drug effects , Sperm Tail/ultrastructure , Spermatozoa/drug effects , Spermatozoa/ultrastructure , Video Recording , Xanthenes/chemistry
4.
Adv Biochem Eng Biotechnol ; 149: 55-90, 2015.
Article in English | MEDLINE | ID: mdl-25652005

ABSTRACT

Filamentous cultures, such as fungi and actinomycetes, contribute substantially to the pharmaceutical industry and to enzyme production, with an annual market of about 6 billion dollars. In mechanically stirred reactors, most frequently used in fermentation industry, microbial growth and metabolite productivity depend on complex interactions between hydrodynamics, oxygen transfer, and mycelial morphology. The dissipation of energy through mechanically stirring devices, either flasks or tanks, impacts both microbial growth through shearing forces on the cells and the transfer of mass and energy, improving the contact between phases (i.e., air bubbles and microorganisms) but also causing damage to the cells at high energy dissipation rates. Mechanical-induced signaling in the cells triggers the molecular responses to shear stress; however, the complete mechanism is not known. Volumetric power input and, more importantly, the energy dissipation/circulation function are the main parameters determining mycelial size, a phenomenon that can be explained by the interaction of mycelial aggregates and Kolmogorov eddies. The use of microparticles in fungal cultures is also a strategy to increase process productivity and reproducibility by controlling fungal morphology. In order to rigorously study the effects of hydrodynamics on the physiology of fungal microorganisms, it is necessary to rule out the possible associated effects of dissolved oxygen, something which has been reported scarcely. At the other hand, the processes of phase dispersion (including the suspended solid that is the filamentous biomass) are crucial in order to get an integral knowledge about biological and physicochemical interactions within the bioreactor. Digital image analysis is a powerful tool for getting relevant information in order to establish the mechanisms of mass transfer as well as to evaluate the viability of the mycelia. This review focuses on (a) the main characteristics of the two most common morphologies exhibited by filamentous microorganisms; (b) how hydrodynamic conditions affect morphology and physiology in filamentous cultures; and (c) techniques using digital image analysis to characterize the viability of filamentous microorganisms and mass transfer in multiphase dispersions. Representative case studies of fungi (Trichoderma harzianum and Pleurotus ostreatus) exhibiting different typical morphologies (disperse mycelia and pellets) are discussed.


Subject(s)
Fungi/physiology , Hydrodynamics , Industrial Microbiology/methods , Biomass , Bioreactors , Fungi/cytology , Industrial Microbiology/trends , Pleurotus/cytology , Pleurotus/physiology , Shear Strength , Signal Transduction , Stress, Mechanical , Trichoderma/cytology , Trichoderma/physiology
5.
Article in English | MEDLINE | ID: mdl-25569929

ABSTRACT

The study of the mechanical and environmental factors that regulate a fundamental event such as fertilization have been subject of multiple studies. Nevertheless, the microscopical size of the spermatozoa and the high beating frequency of their flagella (up to 20 Hz) impose a series of technological challenges for the study of the mechanical factors implicated. Traditionally, due to the inherent characteristics of the rapid sperm movement, and to the technological limitations of microscopes (optical or confocal) to follow in three dimensions (3D) their movement, the analysis of their dynamics has been studied in two dimensions, when the head is confined to a surface. Flagella propel sperm and while their head can be confined to a surface, flagellar movement is not restricted to 2D, always displaying 3D components. In this work, we present a highly novel and useful tool to analyze sperm flagella dynamics in 3D. The basis of the method is a 100 Hz oscillating objective mounted on a bright field optical microscope covering a 16 microns depth space at a rate of ~ 5000 images per second. The best flagellum focused subregions were associated to their respective Z real 3D position. Unprecedented graphical results making evident the 3D movement of the flagella are shown in this work and supplemental material illustrating a 3D animation using the obtained experimental results is also included.


Subject(s)
Imaging, Three-Dimensional/methods , Sperm Motility/physiology , Sperm Tail/physiology , Humans , Male , Movement
6.
J Microsc ; 245(1): 72-81, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21999166

ABSTRACT

Recent advances in microscopy and cytolabelling methods enable the real time imaging of cells as they move and interact in their real physiological environment. Scenarios in which multiple cells move autonomously in all directions are not uncommon in biology. A remarkable example is the swimming of marine spermatozoa in search of the conspecific oocyte. Imaging cells in these scenarios, particularly when they move fast and are poorly labelled or even unlabelled requires very fast three-dimensional time-lapse (3D+t) imaging. This 3D+t imaging poses challenges not only to the acquisition systems but also to the image analysis algorithms. It is in this context that this work describes an original automated multiparticle segmentation method to analyse motile translucent cells in 3D microscopical volumes. The proposed segmentation technique takes advantage of the way the cell appearance changes with the distance to the focal plane position. The cells translucent properties and their interaction with light produce a specific pattern: when the cell is within or close to the focal plane, its two-dimensional (2D) appearance matches a bright spot surrounded by a dark ring, whereas when it is farther from the focal plane the cell contrast is inverted looking like a dark spot surrounded by a bright ring. The proposed method analyses the acquired video sequence frame-by-frame taking advantage of 2D image segmentation algorithms to identify and select candidate cellular sections. The crux of the method is in the sequential filtering of the candidate sections, first by template matching of the in-focus and out-of-focus templates and second by considering adjacent candidates sections in 3D. These sequential filters effectively narrow down the number of segmented candidate sections making the automatic tracking of cells in three dimensions a straightforward operation.


Subject(s)
Imaging, Three-Dimensional/methods , Locomotion , Microscopy, Video/methods , Spermatozoa/cytology , Spermatozoa/physiology , Strongylocentrotus purpuratus/cytology , Time-Lapse Imaging/methods , Algorithms , Animals , Male
7.
Article in English | MEDLINE | ID: mdl-21096252

ABSTRACT

In this work, we describe a segmentation cell method oriented to deal with experimental data obtained from 3D+t microscopical volumes. The proposed segmentation technique takes advantage of the pattern of appearances exhibited by the objects (cells) from different focal planes, as a result of the object translucent properties and its interaction with light. This information allows us to discriminate between cells and artifacts (dust an other) with equivalent size and shape that are present in the biological preparation. Using a simple correlation criteria, the method matches a 3D video template (extracted from a sample of cells) with the motile cells contained into the biological sample, obtaining a high rate of true positives while discarding artifacts. In this work, our analysis is focused on sea urchin spermatozoa cells but is applicable to many other microscopical structures having the same optical properties.


Subject(s)
Cell Tracking/methods , Image Interpretation, Computer-Assisted/methods , Imaging, Three-Dimensional/methods , Microscopy, Video/methods , Pattern Recognition, Automated/methods , Spermatozoa/cytology , Subtraction Technique , Algorithms , Animals , Cells, Cultured , Image Enhancement/methods , Male , Reproducibility of Results , Sea Urchins , Sensitivity and Specificity
8.
Article in English | MEDLINE | ID: mdl-19964530

ABSTRACT

The acquisition and analysis of data in microscopic systems with spatiotemporal evolution is a very relevant topic. In this work, we describe a method to optimize an experimental setup for acquiring and processing spatiotemporal (3D+t) data in microscopic systems. The method is applied to a three-dimensional multi-tracking and analysis system of free-swimming sperm trajectories previously developed. The experimental set uses a piezoelectric device making oscillate a large focal-distance objective mounted on an inverted microscope (over its optical axis) to acquire stacks of images at a high frame rate over a depth on the order of 250 microns. A problem arise when the piezoelectric device oscillates, in such a way that a vibration is transmitted to the whole microscope, inducing undesirable 3D vibrations to the whole set. For this reason, as a first step, the biological preparation was isolated from the body of the microscope to avoid modifying the free swimming pattern of the microorganism due to the transmission of these vibrations. Nevertheless, as the image capturing device is mechanically attached to the "vibrating" microscope, the resulting acquired data are contaminated with an undesirable 3D movement that biases the original trajectory of these high speed moving cells. The proposed optimization method determines the functional form of these 3D oscillations to neutralize them from the original acquired data set. Given the spatial scale of the system, the added correction increases significantly the data accuracy. The optimized system may be very useful in a wide variety of 3D+t applications using moving optical devices.


Subject(s)
Imaging, Three-Dimensional/methods , Animals , Biomedical Engineering , Imaging, Three-Dimensional/instrumentation , Imaging, Three-Dimensional/statistics & numerical data , In Vitro Techniques , Male , Microscopy/instrumentation , Sea Urchins , Sperm Motility , Time Factors , Vibration
9.
J Neuroendocrinol ; 21(5): 439-48, 2009 May.
Article in English | MEDLINE | ID: mdl-19302192

ABSTRACT

Energy expenditure and thermogenesis are regultated by thyroid and sex hormones. Several parameters of hypothalamic-pituitary-thyroid (HPT) axis function are modulated by 17ß-oestradiol (E(2)) but its effects on thyrotrophin-releasing hormone (TRH) mRNA levels remain unknown. We evaluated, by in situ hybridisation and Northern bloting, TRH expression in the paraventricular nucleus of the hypothalamus (PVN) of cycling rats, 2 weeks-ovariectomised (OVX) and OVX animals injected s.c. during 1-4 days with E(2) (5, 50, 100 or 200 µg / kg) (OVX-E). Serum levels of E(2), thyroid-stimulating hormone (TSH), prolactin, corticosterone and triiodothyronine (T(3)) were quantified by radioimmunoassay. Increased serum E(2) levels were observed after 4 days injection of 50 µg / kg E(2) (to 68.5 ± 4.8 pg / ml) in OVX rats. PVN-TRH mRNA levels were slightly higher in OVX than in virgin females at dioestrous 1 or pro-oestrous, decreasing proportionally to increased serum E(2) levels. E(2) injections augmented serum T(3), prolactin, and corticosterone levels. Serum TSH levels augmented with 4 days 50 µg / kg E(2), but not with the higher doses that enhanced serum T(3) levels. Exposure to cold for 1 h resulted in marked HPT axis activation in OVX rats, increasing the levels of TRH mRNA along the rostro-caudal PVN areas, as well as serum TSH, T(3), corticosterone and prolactin levels. By contrast, no significant changes in any of these parameters were observed in cold-exposed OVX-E (50 µg / kg E(2)) rats. Very few PVN-TRHergic neurones expressed the oestrogen receptor type-α, suggesting that the effects of E(2) on PVN-TRH expression are indirect, most probably as a result of its multiple modulatory effects on circulating hormones and their receptor sensitivity. The blunted response of OVX-E rats to cold coincides with the effects of E(2) on the autonomic nervous system and increased cold tolerance.


Subject(s)
Cold Temperature , Estradiol/pharmacology , Paraventricular Hypothalamic Nucleus/drug effects , Paraventricular Hypothalamic Nucleus/metabolism , Thyroid Gland/drug effects , Thyroid Gland/metabolism , Thyrotropin-Releasing Hormone/metabolism , Animals , Body Weight , Corticosterone/blood , Estrogen Receptor alpha/genetics , Estrogen Receptor alpha/metabolism , Female , Humans , Neurons/cytology , Neurons/metabolism , Ovariectomy , Prolactin/blood , Prolactin/genetics , Rats , Rats, Wistar , Thyrotropin-Releasing Hormone/genetics , Triiodothyronine/blood , Triiodothyronine/genetics
10.
Biochem Biophys Res Commun ; 373(1): 125-9, 2008 Aug 15.
Article in English | MEDLINE | ID: mdl-18555013

ABSTRACT

Sperm motility, crucial for fertilization, has been mostly studied in two dimensions (2D) by recording their swimming trajectories near a flat surface. However, spermatozoa swim in three-dimensions (3D) to find eggs, with their speed being the main impediment to track them under realistic conditions. Here, we describe a novel method allowing 3D tracking and analysis of the trajectories of multiple free-swimming sperm. The system uses a piezo-electric device displacing a large focal distance objective mounted on a microscope to acquire 70 image stacks per second, each stack composed of 60 images that span a depth of 100 microm. With this method, 3D paths of multiple sperm in the same field could be visualized simultaneously during 1 s. Within the same sample we found that surface-confined sperm swam 25% slower, produced 3-fold fewer circular revolutions per second, and had trajectories of 134% greater radius of curvature than those sperm swimming freely in 3D.


Subject(s)
Imaging, Three-Dimensional/instrumentation , Imaging, Three-Dimensional/methods , Sperm Motility , Spermatozoa/cytology , Spermatozoa/physiology , Animals , Male , Microscopy, Video , Strongylocentrotus
11.
Med Biol Eng Comput ; 40(4): 479-84, 2002 Jul.
Article in English | MEDLINE | ID: mdl-12227636

ABSTRACT

This paper reports results for a new measure of texture coarseness, as a step towards automation of metaphase finding in cell-proliferation studies. This measure is highly specific to grey-level inter-chromosome coarseness features in microscopic images of metaphase spreads and allows the texture quantification of cytological objects, analysing the intensity profile between chromosome-extrema samples. Chromosome fragments produce patterns of pixels at low resolution, and the local neighbourhood of their individual extrema presents a characteristic coarseness along intensity profiles, on randomly oriented test lines. Results of the use of this new measure on microscope images of fields of metaphases and artifacts are compared with some representative texture measures and the performance of reported metaphase finders. This new measure outperforms the latter, when applied in metaphase detection and elimination of artifacts. This coarseness feature provides a specific metaphase signature that can be used in conjunction with other morphological and textural parameters for automated metaphase discrimination.


Subject(s)
Chromosomes, Human/ultrastructure , Image Processing, Computer-Assisted/methods , Metaphase , Artifacts , Cell Division , Humans
12.
Neuroendocrinology ; 74(6): 407-22, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11752897

ABSTRACT

Thyrotropin-releasing hormone (TRH) is released from the median eminence upon neural stimulation such as cold or suckling exposure. Concomitant with the cold- or suckling-induced release of TRH is a rapid and transient increase in the expression of proTRH mRNA in the paraventricular nucleus (PVN) of the hypothalamus. We employed two strategies to determine whether TRH neurons responding to cold exposure are different from those responding to suckling. First, we attempted to identify a marker of cellular activation in TRH neurons of the PVN. Cold induced c-fos expression in about 25% of TRH neurons of the PVN, but no induction was observed by suckling. Moreover, we explored the expression of a variety of immediate early genes including NGFI-A, fra-1 and c-jun, or CREB phosphorylation but found none to be induced by suckling. The number of cells expressing high levels of proTRH mRNA was counted and compared to total expressing cells. An increased number of cells expressing high levels of proTRH mRNA was observed when both stimuli were applied to the same animal, suggesting that different cells respond separately to each stimulus. We therefore analyzed the distribution of responsive TRH neurons as defined by the cellular level of proTRH mRNA. The proTRH mRNA signal was analyzed within three rostrocaudal zones of the PVN and within six mediolateral columns. Results showed that in response to cold, all areas of the PVN of the lactating rat present increased proTRH mRNA levels, including the anterior zone where few hypophysiotropic TRHergic cells are believed to reside. The distribution of the proTRH mRNA expressing cells in response to cold was quite comparable in female and in male rats. In contrast, the response after suckling was confined to the middle and caudal zones. Our results provide evidence of a functional specialization of TRH cells in the PVN.


Subject(s)
Animals, Suckling/physiology , Cold Temperature , Neurons/physiology , Paraventricular Hypothalamic Nucleus/physiology , Thyrotropin-Releasing Hormone/physiology , Animals , Female , Genetic Variation , Lactation/physiology , Male , Paraventricular Hypothalamic Nucleus/cytology , Protein Precursors/genetics , Pyrrolidonecarboxylic Acid/analogs & derivatives , RNA, Messenger/metabolism , Rats , Rats, Wistar , Thyrotropin-Releasing Hormone/genetics , Tissue Distribution
13.
Med Biol Eng Comput ; 39(3): 391-6, 2001 May.
Article in English | MEDLINE | ID: mdl-11465896

ABSTRACT

The mitotic index (MI) is an important measure in cell proliferation studies. Determination of the MI is usually made by light-microscope analysis of slide preparations. The analyst identifies and counts thousands of cells and reports the percentage of mitotic shapes found among the interphase nuclei. Full automation of this process is an ambitious task, because there can exist very few mitotic shapes among hundreds of nuclei and thousands of artifacts, resulting in a high probability of false positives, i.e. objects erroneously identified as mitosis or nuclei. A semi-automated approach for MI calculation is reported, based on the development of a neural network (NN) for automatic identification of metaphase spreads and stimulated nuclei in digital images of microscope preparations at 10X magnification. After segmentation of the objects on each image, ten different morphometrical, photometrical and textural features are measured on each segmented object. An NN is used to classify the feature vectors into three classes: metaphases, nuclei and artifacts. The system has been able to classify correctly approximately 91% of the objects in each class, in a test set of 191 mitosis, 331 nuclei and 387 artifacts, obtained from 30 different microscope slides. Manual editing of false positives from the metaphase classification results allows the calculation of the MI with an error of 6.5%.


Subject(s)
Image Processing, Computer-Assisted/methods , Metaphase , Neural Networks, Computer , Humans , Mitotic Index
14.
J Bacteriol ; 183(10): 3142-8, 2001 May.
Article in English | MEDLINE | ID: mdl-11325943

ABSTRACT

FliM is part of the flagellar switch complex. Interaction of this protein with phospho-CheY (CheY-P) through its N terminus constitutes the main information relay point between the chemotactic system and the flagellum. In this work, we evaluated the role of the N terminus of FliM in the swimming behavior of Rhodobacter sphaeroides. Strains expressing the FliM protein with substitutions in residues previously reported in Escherichia coli as being important for interaction with CheY showed an increased stop frequency compared with wild-type cells. In accordance, we observed that R. sphaeroides cells expressing FliM lacking either the first 13 or 20 amino acids from the N terminus showed a stopped phenotype. We show evidence that FliMDelta13 and FliMDelta20 are stable proteins and that cells expressing them allow flagellin export at levels indistinguishable from those detected for the wild-type strain. These results suggest that the N-terminal region of FliM is required to promote swimming in this bacterium. The role of CheY in controlling flagellar rotation in this organism is discussed.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Flagella/physiology , Rhodobacter sphaeroides/physiology , Alleles , Bacterial Proteins/genetics , Blotting, Western , Flagellin/metabolism , Gene Deletion , Gene Expression Regulation, Bacterial , Mutagenesis, Site-Directed , Rhodobacter sphaeroides/genetics
15.
J Virol ; 74(20): 9362-71, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11000204

ABSTRACT

We have tested the effect of metabolic inhibitors, membrane cholesterol depletion, and detergent extraction of cell surface molecules on the susceptibility of MA104 cells to infection by rotaviruses. Treatment of cells with tunicamycin, an inhibitor of protein N glycosylation, blocked the infectivity of the SA-dependent rotavirus RRV and its SA-independent variant nar3 by about 50%, while the inhibition of O glycosylation had no effect. The inhibitor of glycolipid biosynthesis d, l-threo-1-phenyl-2-decanoylamino-3-morpholino-1-propanol (PDMP) blocked the infectivity of RRV, nar3, and the human rotavirus strain Wa by about 70%. Sequestration of cholesterol from the cell membrane with beta-cyclodextrin reduced the infectivity of the three viruses by more than 90%. The involvement of N-glycoproteins, glycolipids, and cholesterol in rotavirus infection suggests that the virus receptor(s) might be forming part of lipid microdomains in the cell membrane. MA104 cells incubated with the nonionic detergent octyl-beta-glucoside (OG) showed a ca. 60% reduction in their ability to bind rotaviruses, the same degree to which they became refractory to infection, suggesting that OG extracts the potential virus receptor(s) from the cell surface. Accordingly, when preincubated with the viruses, the OG extract inhibited the virus infectivity by more than 95%. This inhibition was abolished when the extract was treated with either proteases or heat but not when it was treated with neuraminidase, indicating the protein nature of the inhibitor. Two protein fractions of around 57 and 75 kDa were isolated from the extract, and these fractions were shown to have rotavirus-blocking activity. Also, antibodies to these fractions efficiently inhibited the infectivity of the viruses in untreated as well as in neuraminidase-treated cells. Five individual protein bands of 30, 45, 57, 75, and 110 kDa, which exhibited virus-blocking activity, were finally isolated from the OG extract. These proteins are good candidates to function as rotavirus receptors.


Subject(s)
Receptors, Virus/isolation & purification , Rotavirus/physiology , Cholesterol/physiology , Glucosides/pharmacology , Glycolipids/biosynthesis , Glycosylation , Humans , Molecular Weight , Receptors, Virus/physiology
16.
Appl Environ Microbiol ; 64(4): 1400-4, 1998 Apr.
Article in English | MEDLINE | ID: mdl-9546177

ABSTRACT

In this work we introduce the confluent and various sizes image analysis method (COVASIAM), an automated colony count technique that uses digital imaging technology for detection and separation of confluent microbial colonies and colonies of various sizes growing on petri dishes. The proposed method takes advantage of the optical properties of the surfaces of most microbial colonies. Colonies in the petri dish are epi-illuminated in order to direct the reflection of concentrated light coming from a halogen lamp towards an image-sensing device. In conjunction, a multilevel threshold algorithm is proposed for colony separation and counting. These procedures improved the quantification of colonies showing confluence or differences in size. We tested COVASIAM with a sample set of microorganisms that form colonies with contrasting physical properties: Saccharomyces cerevisiae, Aspergillus nidulans, Escherichia coli, Azotobacter vinelandii, Pseudomonas aeruginosa, and Rhizobium etli. These physical properties range from smooth to hairy, from bright to opaque, and from high to low convexities. COVASIAM estimated an average of 95.47% (sigma = 8.55%) of the manually counted colonies, while an automated method based on a single-threshold segmentation procedure estimated an average of 76% (sigma = 16.27) of the manually counted colonies. This method can be easily transposed to almost every image-processing analyzer since the procedures to compile it are generically standard.


Subject(s)
Colony Count, Microbial/methods , Image Processing, Computer-Assisted/methods , Aspergillus nidulans/isolation & purification , Azotobacter vinelandii/isolation & purification , Colony Count, Microbial/instrumentation , Escherichia coli/isolation & purification , Evaluation Studies as Topic , Image Processing, Computer-Assisted/instrumentation , Pseudomonas aeruginosa/isolation & purification , Rhizobium/isolation & purification , Saccharomyces cerevisiae/isolation & purification
17.
Med Biol Eng Comput ; 36(6): 679-85, 1998 Nov.
Article in English | MEDLINE | ID: mdl-10367457

ABSTRACT

As a step towards automation of mitotic index estimation for cell proliferation studies, a roughness feature of surface-intensity images is introduced: the mean depth-width ratio of extrema (MDWRE). This feature allows identification of variable-shaped metaphases and interphase nuclei in the presence of many artefacts (one metaphase per hundreds of nuclei and thousands of artefacts). The texture of the cytological objects (seen as rough surfaces) is quantified by scanning, in one dimension, the lines contained in a closed contour. MDWRE proves to be suitable for image magnifications by a factor of as low as ten, making faster scanning of slides possible. The use of this feature gives +14%, +65%, +133% and +133% better performance figures than classical textural features derived from co-occurrence matrices, such as contrast, energy, entropy and angular second moment, respectively, and +51% better than the relative extrema density (RED). The MDWRE per object and the shape of the histogram of the depth-width ratio of grey-level roughs have been shown to be very useful as textural features for the classification of metaphase images.


Subject(s)
Image Processing, Computer-Assisted/methods , Metaphase , Mitotic Index , Cell Culture Techniques , Cell Division , Humans
18.
Arch Med Res ; 28(2): 183-7, 1997.
Article in English | MEDLINE | ID: mdl-9204606

ABSTRACT

Although the sural nerve is the most extensively studied nerve in man, there is a dearth of data regarding the normal variations in the size-frequency distribution of axons in normal subjects; criteria for assessing the normality of a given individual are not available. Therefore, in everyday practice, the surgical pathologist may meet with difficulty in interpreting the biopsy of one particular individual, in whom the distribution is slightly different from the curves published. The object of this work is to detect the normal limits of variation in the distribution of diameters of myelinated and unmyelinated fibers in normal subjects and to establish the criteria that permit the calculated curves to be used in everyday clinical practice. Normal sural nerves of 19 patients were analyzed. Ages ranged between 18 months and 55 years. Morphometric analysis was performed with the Histoscan X automatic image processing analyzer, and, for statistical analysis, mixtures of lognormal distributions were fitted and tested with Pearson's statistics. Nerves of three diabetic patients were used for testing the method. They were clearly classified as abnormal. The curves, therefore, have been proven useful for everyday surgical pathology practice.


Subject(s)
Nerve Fibers/ultrastructure , Sural Nerve/anatomy & histology , Adolescent , Adult , Axons/ultrastructure , Cell Size , Child , Child, Preschool , Diabetic Neuropathies/pathology , Female , Genetic Variation , Humans , Image Processing, Computer-Assisted , Infant , Male , Middle Aged , Nerve Fibers, Myelinated/ultrastructure , Reference Values
19.
Brain Res ; 761(1): 77-86, 1997 Jun 27.
Article in English | MEDLINE | ID: mdl-9247068

ABSTRACT

PC1 and PC2 are subtilisin-like processing enzymes capable of cleaving thyrotropin releasing hormone (TRH) precursor (pro-TRH) at paired basic residues in vitro. In the paraventricular nucleus of the hypothalamus (PVN), pro-TRH is synthesized to control adenohypophysial thyrotropin and prolactin release. Biochemical and immunological approaches have shown that in the hypothalamus, pro-TRH is extensively cleaved at pairs of basic amino acids. We quantified, by two different approaches, in situ hybridization (ISH) on consecutive cryostat sections or double label ISH, the proportion of PVN TRH neurons containing either PC1 or PC2 mRNAs. Both techniques gave similar results: PC2 mRNA was present in 60-70% of TRH neurons, and PC1 mRNA in 37-46%. Values were similar in the anterior and medial parts of the parvocellular PVN. TRH neurons containing either PC1 or PC2 mRNA were found throughout the areas containing TRH cells without any evidence of anatomical segregation. These results suggest a biochemical heterogeneity in PVN TRH biosynthetic machinery.


Subject(s)
Aspartic Acid Endopeptidases/genetics , Neurons/enzymology , Paraventricular Hypothalamic Nucleus/cytology , Subtilisins/genetics , Thyrotropin-Releasing Hormone/physiology , Animals , Gene Expression Regulation, Enzymologic/physiology , In Situ Hybridization , Male , Neurons/chemistry , Paraventricular Hypothalamic Nucleus/chemistry , Paraventricular Hypothalamic Nucleus/enzymology , Proprotein Convertase 2 , Proprotein Convertases , RNA, Messenger/metabolism , Rats , Rats, Wistar
20.
Synapse ; 25(3): 277-84, 1997 Mar.
Article in English | MEDLINE | ID: mdl-9068126

ABSTRACT

The pattern of association between neurotensin (NT)-immunoreactive (NTIR) preganglionic nerve terminals and cardiac and noncardiac neurons in the stellate ganglion of the cat is analyzed, based on the finding of an excitatory modulation effect of exogenous NT on cardiac functions. For this purpose, NT-containing terminals were labeled by immunohistochemistry, and ganglion cells were detected by retrograde labeling of cardiac and vertebral nerves to identify cardiac and noncardiac neurons. To determine a possible regional localization of NTIR terminals and ganglion cells, the ganglia were divided into four areas: caudal, dorsomedial, cranial, and ventromedial, related to the two major afferent nerves (thoracic white rami 3 [T3WR] and 2 [T2WR]) and the two efferent nerves (vertebral and cardiac). NTIR terminals were widespread in the complete ganglion tissue; they covered practically all the regions explored, although two clusters of high concentration of NTIR terminals were detected in the cranial and caudal areas. By retrograde labelling it was found that cardiac cells were arranged around the exit of the cardiac nerve and that the vertebral neurons were extended from the exit of the vertebral nerve to the entrance of T3WR. The finding of association of NTIR terminals with cardiac neurons may account for the cardioregulatory effect of NT; however, since the presence of NTIR terminals close to the noncardiac neurons is notorious, other regulatory functions of NT must be considered.


Subject(s)
Autonomic Fibers, Preganglionic/chemistry , Brain Mapping/methods , Heart/innervation , Neurotensin/analysis , Presynaptic Terminals/chemistry , Stellate Ganglion/chemistry , Animals , Autonomic Fibers, Preganglionic/cytology , Cats , Female , Immunohistochemistry , Male , Stellate Ganglion/cytology
SELECTION OF CITATIONS
SEARCH DETAIL
...