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1.
SAR QSAR Environ Res ; 35(4): 309-324, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38591134

ABSTRACT

In this study, we focus on the development of Quantitative Structure-Property Relationship (QSPR) models to predict the critical micelle concentration (CMC) for per- and polyfluoroalkyl substances (PFASs). Experimental CMC values for both fluorinated and non-fluorinated compounds were meticulously compiled from existing literature sources. Our approach involved constructing two distinct types of models based on Support Vector Machine (SVM) algorithms applied to the dataset. Type (I) models were trained exclusively on CMC values for fluorinated compounds, while Type (II) models were developed utilizing the entire dataset, incorporating both fluorinated and non-fluorinated compounds. Comparative analyses were conducted against reference data, as well as between the two model types. Encouragingly, both types of models exhibited robust predictive capabilities and demonstrated high reliability. Subsequently, the model having the broadest applicability domain was selected to complement the existing experimental data, thereby enhancing our understanding of PFAS behaviour.


Subject(s)
Fluorocarbons , Micelles , Quantitative Structure-Activity Relationship , Support Vector Machine , Fluorocarbons/chemistry , Models, Chemical , Algorithms
2.
SAR QSAR Environ Res ; 34(8): 605-617, 2023.
Article in English | MEDLINE | ID: mdl-37642367

ABSTRACT

Combating global warming-related climate change demands prompt actions to reduce greenhouse gas emissions, particularly carbon dioxide. Biomass-based biofuels represent a promising alternative fossil energy source. To convert biomass into energy, numerous conversion processes are performed at high pressure and temperature conditions, and the design and dimensioning of such processes requires thermophysical property data, particularly thermal conductivity, which are not always available in the literature. In this paper, we proposed the application of Chemoinformatics methodologies to investigate the prediction of thermal conductivity for hydrocarbons and oxygenated compounds. A compilation of experimental data followed by a careful data curation were performed to establish a database. The support vector machine algorithm has been applied to the database leading to models with good predictive abilities. The support vector regression (SVR) model has then been applied to an external set of compounds, i.e. not considered during the training of models. It showed that our SVR model can be used for the prediction of thermal conductivity values for temperatures and/or compounds that are not covered experimentally in the literature.


Subject(s)
Global Warming , Quantitative Structure-Activity Relationship , Temperature , Thermal Conductivity , Machine Learning
3.
SAR QSAR Environ Res ; 24(4): 259-77, 2013.
Article in English | MEDLINE | ID: mdl-23574496

ABSTRACT

We report the development of predictive models for two fuel specifications: melting points (T(m)) and net heat of combustion (Δ(c)H). Compounds inside the scope of these models are those likely to be found in alternative fuels, i.e. hydrocarbons, alcohols and esters. Experimental T(m) and Δ(c)H values for these types of molecules have been gathered to generate a unique database. Various quantitative structure-property relationship (QSPR) approaches have been used to build models, ranging from methods leading to multi-linear models such as genetic function approximation (GFA), or partial least squares (PLS) to those leading to non-linear models such as feed-forward artificial neural networks (FFANN), general regression neural networks (GRNN), support vector machines (SVM), or graph machines. Except for the case of the graph machines method for which the only inputs are SMILES formulae, previously listed approaches working on molecular descriptors and functional group count descriptors were used to develop specific models for T(m) and Δ(c)H. For each property, the predictive models return slightly different responses for each molecular structure. Therefore, models labelled as 'consensus models' were built by averaging values computed with selected individual models. Predicted results were then compared with experimental data and with predictions of models in the literature.


Subject(s)
Artificial Intelligence , Chemical Phenomena , Gasoline , Transition Temperature , Alcohols/chemistry , Computer Simulation , Databases, Chemical , Esters/chemistry , Hot Temperature , Hydrocarbons/chemistry , Quantitative Structure-Activity Relationship
4.
J Chem Phys ; 138(14): 144102, 2013 Apr 14.
Article in English | MEDLINE | ID: mdl-24981523

ABSTRACT

We have computed interfacial tension in oil-water-surfactant model systems using dissipative particle dynamics (DPD) simulations. Oil and water molecules are modelled as single DPD beads, whereas surfactant molecules are composed of head and tail beads linked together by a harmonic potential to form a chain molecule. We have investigated the influence of the harmonic potential parameters, namely, the force constant K and the equilibrium distance r0, on the interfacial tension values. For both parameters, the range investigated has been chosen in agreement with typical values in the literature. Surprisingly, we observe a large effect on interfacial tension values, especially at large surfactant concentration. We demonstrate that, due to a subtle balance between intra-molecular and inter-molecular interactions, the local structure of surfactants at the oil-water interface is modified, the interfacial tension is changed and the interface stability is affected.

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