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1.
Anal Biochem ; 377(2): 223-33, 2008 Jun 15.
Article in English | MEDLINE | ID: mdl-18381199

ABSTRACT

Visible circular dichroism (CD) spectra from the copper(II) titration of the metal-binding region of the prion protein, residues 57-98, were analyzed using the self-modeling curve resolution method multivariate curve resolution-alternating least squares (MCR-ALS). MCR-ALS is a set of mathematical tools for estimating pure component spectra and composition profiles from mixture spectra. Model-free solutions (e.g., soft models) are produced under the assumption that pure component profiles should be nonnegative and unimodal. Optionally, equality constraints can be used when the concentration or spectrum of one or more species is known. MCR-ALS is well suited to complex biochemical systems such as the prion protein which binds multiple copper ions and thus gives rise to titration data consisting of several pure component spectra with overlapped or superimposed absorption bands. Our study reveals the number of binding modes used in the uptake of Cu(2+) by the full metal-binding region of the prion protein and their relative concentration profiles throughout the titration. The presence of a non-CD active binding mode can also be inferred. We show that MCR-ALS analysis can be initialized using empirically generated or mathematically generated pure component spectra. The use of small model peptides allows us to correlate specific Cu(2+)-binding structures to the pure component spectra.


Subject(s)
Circular Dichroism/methods , Copper/metabolism , Prions/metabolism , Amino Acid Sequence , Analysis of Variance , Animals , Binding Sites , Least-Squares Analysis , Molecular Sequence Data , Peptides/metabolism , Prions/chemistry , Titrimetry
2.
Ann Neurol ; 25(1): 74-81, 1989 Jan.
Article in English | MEDLINE | ID: mdl-2913931

ABSTRACT

The extent of disease as detected by magnetic resonance imaging was compared between 32 patients with benign multiple sclerosis (MS) and 32 patients with the chronic progressive form matched for age, sex, and disease duration. Computer-assisted quantitation of magnetic resonance images revealed a higher mean lesion load in chronic progressive multiple sclerosis (CPMS); however, in approximately 20% of benign MS patients the lesion load was higher than that in the CPMS patients. CPMS patients had a higher number of infratentorial lesions, yet similar numbers of supratentorial lesions, when compared with benign MS patients. The degree of confluency of lesions and the clinical expression of infratentorial lesions were typically higher in the CPMS patients. Benign MS was characterized by a lower degree of confluency and a higher number of asymptomatic infratentorial lesions. Thus, magnetic resonance imaging shows characteristic differences in magnetic resonance-detected changes between MS patients with different clinical courses.


Subject(s)
Brain/pathology , Magnetic Resonance Imaging , Multiple Sclerosis/pathology , Adult , Brain Stem/pathology , Cerebellum/pathology , Female , Humans , Male , Middle Aged
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