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1.
Vet Med Sci ; 8(2): 454-459, 2022 03.
Article in English | MEDLINE | ID: mdl-35166463

ABSTRACT

Rhipicephalus sanguineus is the most widely reported tick in the world. Molecular characterisation is important to verify its taxonomic status in the different parts of the world. In this study, we provide information on the molecular characterisation of R. sanguineus tick of dogs collected from Nigeria. Ticks were collected from 62 of 93 sampled dogs. The collected ticks were subjected to morphological identification with the aid of appropriate entomological keys. Deoxyribonucleic acid (DNA) was extracted from the most prevalent tick species (R. sanguineus) and was subjected to further molecular characterisation protocols. The partial mitochondrial 16S rRNA gene sequences (∼300 bp) were obtained from representative specimens. Data were statistically analysed using the chi-square (χ2 ) test. Phylogenetic analysis was performed including different lineages of R. sanguineus (sl) from Africa, Asia, Europe and America, and other species belonging to the R. sanguineus 'tropical lineage' (R. linnaei) as well as Rhipicephalus turanicus and Ixodes ricinus. Results of this study showed that R. sanguineus was the most abundant ticks of dogs with a prevalence of 61.8% (68/110; 95% CI = 52.5-70.54), followed by Amblyomma variegatum (20.0%) and Haemaphysalis leachi (18.2%). The molecular analysis shows that they are genetically different from the temperate strains but closely related to those from other West African countries. There is a need to establish the vector competence of this common Nigerian dog tick.


Subject(s)
Dog Diseases , Rhipicephalus sanguineus , Animals , Dog Diseases/epidemiology , Dogs , Nigeria , Phylogeny , RNA, Ribosomal, 16S/genetics , Rhipicephalus sanguineus/anatomy & histology , Rhipicephalus sanguineus/genetics
6.
Clin Microbiol Infect ; 19(2): 107-12, 2013 Feb.
Article in English | MEDLINE | ID: mdl-22925473

ABSTRACT

The model of biofilm infection was first proposed over a decade ago. Recent scientific advances have added much to our understanding of biofilms, usually polymicrobial communities, which are commonly associated with chronic infection. Metagenomics has demonstrated that bacteria pursuing a biofilm strategy possess many mechanisms for encouraging diversity. By including multiple bacterial and/or fungal species in a single community, biofilms obtain numerous advantages, such as passive resistance, metabolic cooperation, byproduct influence, quorum sensing systems, an enlarged gene pool with more efficient DNA sharing, and many other synergies, which give them a competitive advantage. Routine clinical cultures are ill-suited for evaluating polymicrobial infections. DNA methods utilizing PCR methods, PCR/mass spectroscopy and sequencing have demonstrated their ability to identify microorganisms and quantitate their contribution to biofilms in clinical infections. A more robust model of biofilm infection along with more accurate diagnosis is rapidly translating into improved clinical outcomes.


Subject(s)
Bacteria/isolation & purification , Bacterial Physiological Phenomena , Biofilms/growth & development , Biota , Coinfection/diagnosis , Fungi/isolation & purification , Bacteria/classification , Coinfection/microbiology , Fungi/classification , Humans , Microbiological Techniques/methods , Molecular Diagnostic Techniques/methods
7.
Clin Microbiol Infect ; 18(7): 696-701, 2012 Jul.
Article in English | MEDLINE | ID: mdl-21883668

ABSTRACT

Tick-borne relapsing fever (TBRF) is a spirochetal infection caused by the genus Borrelia. The disease is distributed in the Old and New World with many different species reported. In Europe, TBRF is caused by B. hispanica transmitted to man by Ornithodoros erraticus, a soft tick usually found in old premises to shelter pig herds. In Portugal, the first human case of TBRF was reported in 1942 but since the beginning of the 1960s, the disease has rarely been described and seems to either have disappeared or have been undiagnosed. Therefore, in 2009 a survey was undertaken to evaluate the presence of the tick in this type of premises and to evaluate its role as a reservoir of Borrelia. The work was carried out where the ticks were previously reported in the Alentejo and Algarve regions. Of 63 pigpens surveyed, O. erraticus was collected from 19% (n = 12) of these pigpens using CO(2) traps. To evaluate potential Borrelia hosts, both pigs (n = 25) and small rodents (n = 10) inhabiting these pigpens were surveyed for Borrelia presence, by whole blood PCR and/or tissue culture, respectively. All results for pigs and rodents were negative for the presence of B. hispanica. PCR assays targeting the 16S rRNA gene and intergenic spacer region of Borrelia were used. Sequence analysis of the positive samples confirmed the presence of B. hispanica in 2.2% (n = 5) of ticks from a pigpen in Alentejo. These results confirm natural, but albeit low, persistence of this agent in Portugal.


Subject(s)
Borrelia/isolation & purification , Ornithodoros/microbiology , Animals , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Disease Reservoirs , Molecular Sequence Data , Portugal , RNA, Ribosomal, 16S/genetics , Rodentia , Sequence Analysis, DNA , Swine
8.
Clin Microbiol Infect ; 17(2): 195-7, 2011 Feb.
Article in English | MEDLINE | ID: mdl-20456459

ABSTRACT

Genomic sequencing of two relapsing fever spirochaetes showed truncation of recA in Borrelia recurrentis, but not in Borrelia duttonii. RecA has an important role among bacteria; we investigated whether this characteristic was representative of B. recurrentis, or an artefact following in vitro cultivation. We sequenced recA directly from samples of patient with louse-borne relapsing fever (B. recurrentis) or tick-borne relapsing fever (B. duttonii). We confirmed the premature stop codon in seven louse-borne relapsing fever samples, and its absence from three tick-borne relapsing fever samples. Furthermore, specific signature polymorphisms were found that could differentiate between these highly similar spirochaetes.


Subject(s)
Borrelia/physiology , Rec A Recombinases/physiology , Relapsing Fever/microbiology , Borrelia/genetics , Borrelia/isolation & purification , Codon, Nonsense , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Ethiopia , Humans , Molecular Sequence Data , Polymorphism, Genetic , Rec A Recombinases/genetics , Sequence Analysis, DNA , Tanzania
9.
Phys Med Biol ; 55(16): 4721-34, 2010 Aug 21.
Article in English | MEDLINE | ID: mdl-20671354

ABSTRACT

A small field of view, high resolution gamma camera has been integrated into a dedicated breast, single photon emission computed tomography (SPECT) device. The detector can be flexibly positioned relative to the breast and image beyond the chest wall, allowing the system to capture direct views of the heart and liver. The incomplete sampling of these organs creates artifacts in reconstructed images, complicating lesion detection. To understand the limits imposed on a 3D acquisition trajectory, sequential tilted trajectories at increasing polar tilt are utilized to collect data of anthropomorphic phantoms filled with aqueous (99m)Tc in a clinically realistic concentration ratio. The counts collected per projection between different scans and the SNR, contrast and resolution (FWHM) of two hot lesions were compared. As expected, the counts per projection increased when the camera had direct views of the heart and liver, but remained relatively constant at other angles. The SNR, contrast and FWHM were more affected by the insufficient sampling of the data by the large polar angles than by the cardiac and hepatic activity. An upper bound on polar tilt for each azimuthal position reduces the artifacts in the reconstructed images. Such trajectories were implemented to show artifact-free reconstructed images.


Subject(s)
Breast/pathology , Liver/pathology , Myocardium/pathology , Technetium/pharmacokinetics , Tomography, Emission-Computed, Single-Photon/methods , Artifacts , Breast/radiation effects , Heart/radiation effects , Humans , Image Processing, Computer-Assisted , Imaging, Three-Dimensional , Liver/radiation effects , Phantoms, Imaging , Reproducibility of Results , Tissue Distribution
10.
Phys Med Biol ; 55(7): 1903-16, 2010 Apr 07.
Article in English | MEDLINE | ID: mdl-20224159

ABSTRACT

An observer-based contrast-detail study is performed in an effort to evaluate the limits of object detectability using a dedicated CZT-based breast SPECT imaging system under various imaging conditions. A custom geometric contrast-resolution phantom was developed that can be used for both positive ('hot') and negative contrasts ('cold'). The 3 cm long fillable tubes are arranged in six sectors having equal inner diameters ranging from 1 mm to 6 mm with plastic wall thicknesses of <0.25 mm, on a pitch of twice their inner diameters. Scans of the activity filled tubes using simple circular trajectories are obtained in a 215 mL uniform water filled cylinder, varying the rod:background concentration ratios from 10:1 to 1:10 simulating a large range of biological uptake ratios. The rod phantom is then placed inside a non-uniformly shaped 500 mL breast phantom and scans are again acquired using both simple and complex 3D trajectories for similarly varying contrasts. Summed slice and contiguous multi-slice images are evaluated by five independent readers, identifying the smallest distinguishable rod for each concentration and experimental setup. Linear and quadratic regression is used to compare the resulting contrast-detail curves. Results indicate that in a moderately low-noise 500 mL background, using the SPECT camera having 2.5 mm intrinsic pixels, the mean detectable rod was approximately 3.4 mm at a 10:1 ratio, degrading to approximately 5.2 mm with the 2.5:1 concentration ratio. The smallest object detail was observed using a 45 degrees tilted trajectory acquisition. The complex 3D projected sine wave acquisition, however, had the most consistent combined intra- and inter-observer results, making it potentially the best imaging approach for consistent results.


Subject(s)
Algorithms , Breast Neoplasms/diagnostic imaging , Breast/diagnostic imaging , Image Interpretation, Computer-Assisted/methods , Imaging, Three-Dimensional/methods , Tomography, Emission-Computed, Single-Photon/methods , Female , Humans , Image Enhancement/methods , Observer Variation , Phantoms, Imaging , Reproducibility of Results , Sensitivity and Specificity , Tomography, Emission-Computed, Single-Photon/instrumentation
11.
J Appl Microbiol ; 108(4): 1115-22, 2010 Apr.
Article in English | MEDLINE | ID: mdl-19886891

ABSTRACT

Borrelial relapsing fever was once a major worldwide epidemic disease that made a significant impact on Livingstone during his epic travels through Africa and throughout Europe. Indeed, the term 'relapsing fever' was first used to describe clinical cases of this disease in Edinburgh. During the last century, we have witnessed the demise of the louse-borne infection, largely through improving standards of living resulting in a reduction in body lice, the vector for Borrelia recurrentis [louse-borne relapsing fever (LBRF)]. The tick-borne zoonotic form of the disease persists in endemic foci around the world [tick-borne relapsing fever (TBRF)]. Indeed, TBRF is reportedly the most common bacterial infection from Senegal and listed within the top ten causes of mortality in children under five in Tanzania. In Ethiopia, LBRF is again within the top ten causes of hospital admission, associated with significant morbidity and mortality. Despite these figures, many now regard relapsing fever as an unusual tropical disease. Certainly, recent cases have been imported following travel from endemic zones. More surprisingly, cases have been reported following family reunions in Colorado, USA. A further case was reported from the Mt Wilson observatory in Los Angeles, USA. In many regions, the infection is zoonotic with natural reservoirs in several vertebrate species. In West Africa, infection is again primarily zoonotic. Whether those species found predominantly in East Africa are zoonoses or are infections of humans alone is still debated, however, the life cycle may be determined by the feeding preferences of their arthropod vectors.


Subject(s)
Relapsing Fever/microbiology , Relapsing Fever/transmission , Animals , Arthropod Vectors/microbiology , Birds , Borrelia/physiology , Chiroptera , Disease Reservoirs/microbiology , History, 19th Century , History, 20th Century , Humans , Pets , Relapsing Fever/epidemiology , Relapsing Fever/history , Relapsing Fever/prevention & control
12.
Environ Technol ; 30(9): 893-910, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19803328

ABSTRACT

Trials were conducted aboard the tanker Seabulk Mariner to test a natural product, SeaKleen, as a biocide controlling non-indigenous populations of plankton and bacteria in ballast water. SeaKleen was dosed into matched ballast tanks at two different concentrations, 0.8 mg L(-1) active ingredient (a.i.) and 1.6 mg L(-1) a.i. during ballasting off the Oregon coast during a three-day passage to Prince William Sound, Alaska. Live organism counts from treated ballast water were compared with those from untreated (control tank) water collected from the same source location. Shipboard chemical analyses were made to verify dose and quantify chemical degradation and residuals following dilution. Results indicated that both SeaKleen doses resulted in complete zooplankton and phytoplankton mortality and that the higher dose (1.6 mg L(-1) a.i.) caused a two-log removal of culturable bacteria over a 92 h grow-out period. Spectrophotometry confirmed initial dosing to within 5% of nominal values. Shipboard bioassays were conducted using larval fish (Cyprinodon variegatus), brine shrimp (Artemia salina) and the bioluminescent dinoflagellate Pyrocystis lunula. Exposure of the test organisms to water drawn from treated ballast tanks 48 h after SeaKleen was added to the tanks resulted in 100% mortalities in Cyprinodon and Pyrocystis at both doses. Corresponding mortalities for Artemia larvae were 100% and 60% for high and low SeaKleen doses, respectively. Toxicity testing of treated water, subjected to varying dilutions, indicated that residual toxicity to even the most sensitive organisms would be eliminated once the discharge had dispersed beyond 100 feet from the vessel.


Subject(s)
Bacteria/drug effects , Plankton/drug effects , Ships , Sterilization/methods , Vitamin K 3/pharmacology , Water Pollution/prevention & control , Water Purification/methods , Cell Survival/drug effects , Dose-Response Relationship, Drug , Pacific Ocean , Water Microbiology
13.
Clin Microbiol Infect ; 15(5): 395-6, 2009 May.
Article in English | MEDLINE | ID: mdl-19489920

ABSTRACT

Relapsing fever borreliosis is often shrouded in mystery. From its discovery, it has evaded fulfilment of Koch's postulates. It has resulted in epidemic waves of infection, although it is now mostly localized to particular endemic pockets of infection. Structurally, this spirochaete breaks many paradigms for conventional microorganisms, e.g. through its segmented genomic structure. Disclosure of host-microbial interactions is revealing a plethora of mechanisms, from antigenic variation to binding of various host-derived proteins. We dispel some of the myths and explore current understanding of this much neglected area through a series of reviews within this theme section.


Subject(s)
Borrelia/genetics , Borrelia/pathogenicity , Relapsing Fever/epidemiology , Relapsing Fever/microbiology , Endemic Diseases , Humans
14.
Clin Microbiol Infect ; 15(5): 400-6, 2009 May.
Article in English | MEDLINE | ID: mdl-19489922

ABSTRACT

Relapsing fever, caused by spirochaetes belonging to the genus Borrelia, was once the cause of worldwide epidemic disease. This was largely through infection with the louse-borne form of the disease, caused by Borrelia recurrentis (louse-borne relapsing fever (LBRF)). During the last century, we have witnessed the demise of this infection, largely owing to improved standards of living and the introduction of the insecticide DDT, resulting in a reduction in the incidence of the body louse, the vector for relapsing fever. In areas of extreme poverty this disease persists, causing a significant burden of disease. It is now looking probable that this infection is caused by a louse-adapted variant of Borrelia duttonii, transmitted by Ornithodoros moubata 'soft' ticks in East Africa. Like LBRF, infection still causes impact, particularly affecting young children and pregnant women. Over recent years, the true burden of relapsing fever caused by infection with the closely related Borrelia crocidurae, transmitted by Ornithodoros sonrai ticks, has only just begun to emerge. Here, the current state of knowledge concerning relapsing fever in Africa is reviewed.


Subject(s)
Borrelia/isolation & purification , Relapsing Fever/epidemiology , Africa/epidemiology , Animals , Bacteria , Disease Vectors , Humans , Incidence , Ornithodoros/microbiology
15.
Vet Res Commun ; 32(3): 209-13, 2008 Mar.
Article in English | MEDLINE | ID: mdl-17934790

ABSTRACT

This report describes the use of cell mediated immunity to improve specificity of current diagnosis for Brucella suis. Diagnosis is problematic due to cross reactions that lead to false positive serological reactions (FPSR) in the standard diagnostic tests. A common cause of this cross reactivity is infection with the organism Yersinia enterocolitica O:9. Gottingen mini-pigs were experimentally infected with B. suis biovar I field strain or Y. enterocolitica serotype O:9 biotype 3. Infection was followed for 70 days. During this time whole blood stimulation assays were set up using Brucella specific antigen. IFNgamma was measured in the supernatants (SN) from these assays by ELISA. Concurrent standard serological tests were carried out. The results indicate that the IFNgamma assay is specifically able to distinguish Y. enterocolitica O:9 infection from a B. suis infection in experimentally infected mini-pigs. These results represent an improvement in diagnostic specificity compared to currently used serological tests. Thus suggesting that in a surveillance setting this test could be applied as a confirmatory test in the face of FPSR.


Subject(s)
Brucella suis/isolation & purification , Brucellosis/veterinary , Enzyme-Linked Immunosorbent Assay/veterinary , Interferon-gamma/blood , Swine Diseases/diagnosis , Analysis of Variance , Animals , Antibodies, Bacterial/blood , Antibodies, Bacterial/metabolism , Brucellosis/diagnosis , Brucellosis/immunology , Enzyme-Linked Immunosorbent Assay/methods , Enzyme-Linked Immunosorbent Assay/standards , Female , Interferon-gamma/immunology , Population Surveillance/methods , Swine , Swine Diseases/immunology , Swine, Miniature , Time Factors , Yersinia Infections/diagnosis , Yersinia Infections/veterinary , Yersinia enterocolitica/isolation & purification
16.
Environ Technol ; 28(3): 309-19, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17432383

ABSTRACT

Several benzo-, naphtho- and anthraquinones were tested for their efficacy as biocides in controlling aquatic nuisance species in ships' ballast water. A requirement of this application was broad spectrum aquatic toxicity, coupled with a relatively rapid rate of degradation, in order to comply with coastal discharge requirements. Compounds were screened using a suite of toxicity bioassays designed to establish their relative toxicity to an array of planktonic organisms including larval bivalves Dreissena and Crassostrea, various developmental stages of the estuarine copepod Eurytemora affinis, brine shrimp larvae (Artemia salina), the freshwater invasive water flea Bythotrephes, larval sheepshead minnows CCyprinodon variegates) and two unicellular algal genera Isochrysis and Neochloris.. The majority of the data were recorded as the lowest concentration of the test compound resulting in complete mortality or inactivation of test organisms (LC ,m). The naphthoquinones juglone, plumbagin, menadione and naphthazarin showed the highest toxicity to the broadest range of organisms, often at levels much less than 1 mg l(-1), and most of the attention was focused on this group. While plumbagin and juglone appeared overall to be the most toxic compounds, it was concluded that menadione was probably the most cost-effective candidate compound for shipboard use for controlling invasive species in ballast water, particularly in view of the large volumes of water that would require treatment.


Subject(s)
Biological Products/toxicity , Cyprinidae , Disinfectants/toxicity , Invertebrates/drug effects , Pest Control/methods , Phaeophyceae/drug effects , Quinones/toxicity , Ships , Animals , Larva/drug effects , Molecular Structure , Naphthoquinones , Toxicity Tests , Vitamin K 3
17.
Water Res ; 41(6): 1294-302, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17270232

ABSTRACT

Current UN International Maritime Organization legislation mandates the phased introduction of ballast water treatment technologies capable of complying with rigorous standards related to removal of waterborne organisms. Doubts concerning mechanical treatments at very high ballasting rates have renewed interest in chemical treatment for very large vessels. High removal rates for biota require broad spectrum biocides that are safe to transport and handle and pose no corrosion problems for ships' structure. The current study focuses on the naphthoquinone group of compounds and extends a previously reported set of screening bioassays with an investigation of the toxicity of four naphthoquinones to select protists and prokaryotes, representative of typical ballast water organisms. Vegetative dinoflagellate cysts exposed to 2.0 mg/L of the naphthoquinones juglone, plumbagin, menadione and naphthazarin showed varying degrees of chloroplast destruction, with menadione demonstrating the most potency. Laboratory and mesocosm exposures of various phytoplankton genera to menadione showed toxicity at 1.0 mg/L. Juglone demonstrated the most bactericidal activity as judged by a Deltatox assay (Vibrio fischeri) and by acridine orange counts of natural bacterial populations.


Subject(s)
Bacteria/drug effects , Naphthoquinones/pharmacology , Phytoplankton/drug effects , Ships , Aliivibrio fischeri/drug effects , Animals , Biological Assay/methods , Dinoflagellida/drug effects , Environmental Monitoring , Microscopy, Fluorescence , Naphthoquinones/toxicity , Vitamin K 3/toxicity , Waste Disposal, Fluid/methods
18.
Phys Med Biol ; 51(19): 5051-64, 2006 Oct 07.
Article in English | MEDLINE | ID: mdl-16985287

ABSTRACT

We evaluate the effect of breast shape and size and lesion location on a dedicated emission mammotomography system developed in our lab. The hemispherical positioning gantry allows ample flexibility in sampling a pendant, uncompressed breast. Realistic anthropomorphic torso (which includes the upper portion of the arm) and breast phantoms draw attention to the necessity of using unique camera trajectories (orbits) rather than simple circular camera trajectories. We have implemented several novel three-dimensional (3D) orbits with fully contoured radius-of-rotation capability for compensating for the positioning demands that emerge from different breast shapes and sizes. While a general orbit design may remain the same between two different breasts, the absolute polar tilt range and radius-of-rotation range may vary. We have demonstrated that using 3D orbits with increased polar camera tilt, lesions near the chest wall can be visualized for both large and small sized breasts (325 ml to 1,060 ml), for a range of intrinsic contrasts (three to ten times higher activity concentration in the lesion than breast background). Overall, nearly complete 3D acquisition schemes yield image data with relatively high lesion SNRs and contrasts and with minimal distortion of the uncompressed breast shape.


Subject(s)
Breast/pathology , Mammography/methods , Tomography, Emission-Computed/methods , Equipment Design , Female , Humans , Image Enhancement , Image Interpretation, Computer-Assisted , Image Processing, Computer-Assisted , Imaging, Three-Dimensional , Phantoms, Imaging
19.
Infect Immun ; 74(7): 4157-63, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16790790

ABSTRACT

Relapsing fever is a rapidly progressive and severe septic disease caused by certain Borrelia spirochetes. The disease is divided into two forms, i.e., epidemic relapsing fever, caused by Borrelia recurrentis and transmitted by lice, and the endemic form, caused by several Borrelia species, such as B. duttonii, and transmitted by soft-bodied ticks. The spirochetes enter the bloodstream by the vector bite and live persistently in plasma even after the development of specific antibodies. This leads to fever relapses and high mortality and clearly indicates that the Borrelia organisms utilize effective immune evasion strategies. In this study, we show that the epidemic relapsing fever pathogen B. recurrentis and an endemic relapsing fever pathogen, B. duttonii, are serum resistant, i.e., resistant to complement in vitro. They acquire the host alternative complement pathway regulator factor H on their surfaces in a similar way to that of the less serum-resistant Lyme disease pathogen, B. burgdorferi sensu stricto. More importantly, the relapsing fever spirochetes specifically bind host C4b-binding protein, a major regulator of the antibody-mediated classical complement pathway. Both complement regulators retained their functional activities when bound to the surfaces of the spirochetes. In conclusion, this is the first report of complement evasion by Borrelia recurrentis and B. duttonii and the first report showing capture of C4b-binding protein by spirochetes.


Subject(s)
Borrelia/metabolism , Complement C4b-Binding Protein/metabolism , Complement Factor H/metabolism , Complement Inactivating Agents/metabolism , Relapsing Fever/metabolism , Borrelia/immunology , Borrelia/pathogenicity , Borrelia burgdorferi/immunology , Humans , Relapsing Fever/immunology
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