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4.
Arch Biochem Biophys ; 238(1): 30-42, 1985 Apr.
Article in English | MEDLINE | ID: mdl-3885857

ABSTRACT

Difference spectroscopy was used to determine the equilibrium constants and thermodynamic parameters for the monomer-dimer association of bovine and porcine insulin and bovine proinsulin at pH 2.0 and 7.0. At pH 2 delta G degree 25, delta S degree, and delta H degree for dimerization of bovine insulin were found to be -6.6 kcal/mol, -18 cal/mol-deg, and -12 kcal/mol, respectively. Porcine insulin behaved similarly to bovine insulin in its dimerization properties in that delta G degree 25, delta S degree, and delta H degree were found to be -6.8 kcal/mol, -14 cal/mol-deg, and -11 kcal/mol, respectively. At pH 7 delta G degree 25, delta S degree, and delta H degree for dimerization of bovine insulin were found to be -7.2 kcal/mol, -16 cal/mol/deg, and -12 kcal/mol, respectively. At pH 7.0 delta G degree 25, delta S degree, and delta H degree for dimerization of porcine insulin were -6.7 kcal/mol, -11.6 cal/mol-deg, and -10 kcal/mol, respectively. The similarity in the thermodynamic parameters of both insulin species at the different pH's suggests that there are minimal structural changes at the monomer-monomer contact site over this pH range. The dimerization of both insulin species is under enthalpic control. This may suggest that the formation of the insulin dimer is not driven by hydrophobic bonding but, rather, is driven by the formation between subunits of four hydrogen bonds in an apolar environment. At pH 2 delta G degree 25, delta S degree, and delta H degree for dimerization of bovine proinsulin were found to be -5.3 kcal/mol, -26 cal/mol-deg, and -13 kcal/mol, respectively. At pH 7 delta G degree 25, delta S degree, and delta H degree for dimerization of proinsulin were -5.9 kcal/mol, -4.2 cal/mol-deg, and -7.2 kcal/mol, respectively. Although the presence of the C-peptide on proinsulin does not drastically affect the overall free energy change of dimer formation (as compared to insulin), the other thermodynamic parameters are rather drastically altered. This may be because of electrostatic interactions of groups on the C-peptide with groups on the B-chain which are near the subunit contact site in the insulin dimer.


Subject(s)
Insulin/analysis , Proinsulin/analysis , Animals , Cattle , Chemical Phenomena , Chemistry , Hydrogen-Ion Concentration , Mathematics , Models, Chemical , Protein Binding , Species Specificity , Spectrophotometry/methods , Swine , Thermodynamics
5.
Arch Biochem Biophys ; 231(2): 477-86, 1984 Jun.
Article in English | MEDLINE | ID: mdl-6428318

ABSTRACT

An affinity-label chelate for the enzyme trypsin was synthesized by a novel synthetic technique which takes advantage of the presence of a dangling carboxylate arm in the [Co(EDTA)Cl]2- complex anion. The dangling carboxylate group was coupled to the amino group of p-aminobenzamidine, an effective inhibitor of trypsin activity, via the carbodiimmide reaction to produce a trypsin affinity label at one end and a strong EDTA-like chelating agent at the other, coupled through an amide bond. The cobalt ion can be removed if desired by reduction with Fe2+ + ascorbate, and alternate metal ions inserted in its place. The reaction is general, and affinity labels which contain amino groups can be easily coupled via this procedure, allowing the introduction of a paramagnetic or fluorescent probe into a protein or nucleotide system. The same method has been used to prepare a highly effective chelating gel which is capable of removing calcium and lanthanide ions from the binding protein parvalbumin.


Subject(s)
Affinity Labels/chemical synthesis , Amidines , Amines/analysis , Benzamidines , Chelating Agents/chemical synthesis , Edetic Acid , Amidines/chemical synthesis , Benzamidines/chemical synthesis , Chemical Phenomena , Chemistry , Chromatography/methods , Edetic Acid/analogs & derivatives , Edetic Acid/chemical synthesis , Hydrolysis , Magnetic Resonance Spectroscopy , Metalloproteins/analysis , Spectrophotometry/methods , Spectrophotometry, Infrared
6.
J Biol Chem ; 259(9): 5411-3, 1984 May 10.
Article in English | MEDLINE | ID: mdl-6715351

ABSTRACT

Reaction of human serum albumin with p-nitrophenylanthranilate results in transesterification of the anthraniloyl group to tyrosine 411. Titration of anthraniloyl-Tyr-411-albumin with long chain or short chain fatty acids produces marked changes in the absorption and fluorescence spectra of the anthraniloyl moiety as fatty acids bind in the channel near it. It appears that the anthraniloyl group is a very sensitive probe that can follow binding of small molecules at the 3-AB subdomain of human serum albumin.


Subject(s)
Fatty Acids/metabolism , Protease Inhibitors , Serum Albumin/metabolism , Tyrosine , ortho-Aminobenzoates , Humans , Kinetics , Palmitic Acid , Palmitic Acids/metabolism , Protein Binding , Spectrophotometry
7.
J Bacteriol ; 155(3): 1088-93, 1983 Sep.
Article in English | MEDLINE | ID: mdl-6885716

ABSTRACT

Polyuronides were extracted from purified yeast and mycelial walls of Mucor rouxii by sequential treatments with lithium chloride and potassium hydroxide and were fractionated by ion-exchange chromatography on DEAE-Sephadex. Two polymers (I and II) of different acidity were found in both wall types. Polymer I contained D-glucuronic acid, L-fucose, D-mannose, and much smaller amounts of D-galactose. Yeast and mycelial polymer I had similar uronic acid contents but differed in their neutral sugar compositions and molecular weights. Polymer II from both cell types contained largely D-glucuronic acid and had similar molecular weights. On partial acid hydrolysis, both polymers I and II gave rise to insoluble glucuronans which appeared to be homopolymeric. One-third of the total uronosyl residues of polymer I, and almost all of the uronosyl residues of polymer II, were present in homopolymeric segments. However, homopolymers derived from polymers I and II may not be identical.


Subject(s)
Mucor/analysis , Uronic Acids/analysis , Cell Wall/analysis , Chromatography, Ion Exchange , Fucose/analysis , Glucuronates/analysis , Glucuronic Acid , Hydrolysis , Mannose/analysis , Molecular Weight , Polymers/analysis
8.
Biochemistry ; 22(10): 2415-20, 1983 May 10.
Article in English | MEDLINE | ID: mdl-6860637

ABSTRACT

The single cysteine residue (Cys-34) of human serum albumin was modified with the organic mercurial [4-[p-(dimethylamino)phenyl]azo]phenyl]mercuric acetate. Introduction of this chromophore into the protein results in the quenching of the protein tryptophan fluorescence spectrum due to energy transfer from the tryptophan residue to the mercurial. Since human albumin contains only a single tryptophan, it was then possible to calculate distances between the mercurial bound at Cys-34 and Trp-214 under various conditions. This distance contracted during the course of the N leads to F transition, being 34-35 A in the N conformation (pH 6-7.5) and 29.9 A in the F conformation (pH 3.6). The distance increased substantially during the course of the F leads to E transition occurring between pH 3.6 and pH 1.9 and was found to be nearly 37 A at pH 1.9. The distance between Cys-34 and Trp-214 was found to undergo a slight contraction during the N leads to B transition occurring between pH 7.0 and pH 9.0. At pH 8.5-9 where the protein is predominately in the B form, the distance was found to be slightly more than 31 A.


Subject(s)
Cysteine , Serum Albumin , Tryptophan , Humans , Hydrogen-Ion Concentration , Kinetics , Phenylmercuric Acetate/analogs & derivatives , Protein Conformation , Spectrometry, Fluorescence , Spectrophotometry, Ultraviolet
9.
Biochemistry ; 22(10): 2420-7, 1983 May 10.
Article in English | MEDLINE | ID: mdl-6860638

ABSTRACT

Reaction of p-nitrophenyl anthranilate with human serum albumin at pH 8.0 results in esterification of a single anthraniloyl moiety with the hydroxyl group of tyrosine-411. The absorption spectrum of the anthraniloyl group overlaps the fluorescence emission of the single tryptophan residue at position 214. This study complements that of the preceding paper [Suzukida, M., Le, H. P., Shahid, F., McPherson, R. A., Birnbaum, E.R., & Darnall, D. W. (1983) Biochemistry (preceding paper in this issue)] where an azomercurial group was introduced at cysteine-34. Anthraniloyl fluorescence was also quenched by the azomercurial absorption at Cys-34. Thus measurement of resonance energy transfer between these three sites allowed distances to be measured between Cys-34 in domain I, Trp-214 in domain II, and Tyr-411 in domain III of human serum albumin. At pH 7.4 in 0.1 M phosphate the Trp-214 leads to Tyr-411, Tyr-411 leads to Cys-34, and Trp-214 leads to Cys-34 distances were found to be 25.2 +/- 0.6, 25.2 +/- 2.1, and 31.8 +/- 0.8 A, respectively.


Subject(s)
Cysteine , Serum Albumin , Tryptophan , Tyrosine , Circular Dichroism , Energy Transfer , Humans , Hydrogen-Ion Concentration , Kinetics , Protease Inhibitors , Protein Conformation , Spectrophotometry , ortho-Aminobenzoates
10.
J Biol Chem ; 257(10): 5618-22, 1982 May 25.
Article in English | MEDLINE | ID: mdl-7068610

ABSTRACT

Serum albumin exists in the native or N conformation between pH 5 and 7. As the pH is lowered from 5 to 3.5, the protein undergoes a conformational change resulting in expansion, known as the N = to F (partially acid expanded) transition. As the pH is lowered still further to 2, the protein continues to expand. In the present study, using the techniques of circular dichroism, fluorescence, and UV difference spectroscopy, lanthanide ions at concentrations between 1-30 mM have been shown to produce both changes in the albumin structure analogous to the N = to F transition and acid expansion of bovine serum albumin at a constant pH near 6.


Subject(s)
Metals, Rare Earth , Serum Albumin, Bovine , Cations , Circular Dichroism , Hydrogen-Ion Concentration , Protein Binding , Protein Conformation , Spectrometry, Fluorescence
11.
Biochemistry ; 20(1): 38-43, 1981 Jan 06.
Article in English | MEDLINE | ID: mdl-7470477

ABSTRACT

A difference spectrophotometric method for the rapid determination of equilibrium constants for protein--ligand interactions has been developed. The method requires no knowledge of the extinction coefficient of either reactants or products. Furthermore the method allows rapid determination of the temperature dependence of a reaction and thus leads to rapid determination of thermodynamic parameters. The method has been tested by following the interactions of ligands with hemerythrin, the nonheme iron, oxygen storage protein isolated from Phasocolopsis gouldii. The reactions were studied at various temperatures and ionic strengths, and standard thermodynamic parameters were determined. The standard thermodynamic parameters for the conversion of metaquohemerythrin to methydroxyhemerythrin were found to be delta H degrees = 5.8 +/- 1.3 kcal mol-1 and delta S degrees = -11.5 +/- 1.5 cal mol-1 deg-1. For the reaction of metaquohemerythrin with thiocyanate ion to produce metthiocyanatohemerythrin delta H degrees = --13.0 +/- 1.6 kcal mol-1 and delta S degrees - --25.3 +/- 5.5 cal mol-1 deg-1. For the reaction of thiocyanate ion with methydroxy-hemerythrin delta H degrees = --6.6 +/- 0.8 kcal mol-1 and delta S degrees = --38.3 +/- 4.0 cal mol-1 deg-1. Perchlorate ion decreases the affinity of metaquohemerhythrin for thiocyanate ion. This is reflected in both the entropy and enthalpy being more unfavorable for the reaction in the presence of perchlorate ion.


Subject(s)
Hemerythrin , Metalloproteins , Proteins , Animals , Annelida , Iron , Ligands , Mathematics , Osmolar Concentration , Spectrophotometry , Thermodynamics
12.
Biochim Biophys Acta ; 624(1): 1-12, 1980 Jul 24.
Article in English | MEDLINE | ID: mdl-7407229

ABSTRACT

The heat and guanidine hydrochloride denaturation of thermolysin has been followed by fluorescence techniques. The native enzyme has a single emission peak which is decreased in intensity and which splits into two clearly resolved peaks upon denaturation. These data are interpreted to indicate that energy transfer from tyrosine to tryptophan occurs in the native enzyme which is lost upon denaturation. Even though zinc is fully bound to thermolysin at 90 degrees C or in the presence of 6 M guanidine hydrochloride, removal of zinc from the denatured enzyme has no effect on the emission spectrum. Removal of Ca2+ from the denatured enzyme. These data indicate that even though the metal ions are bound to the denatured protein, they provide little structural integrity to the protein as measured by energy transfer between tyrosine and tryptophan.


Subject(s)
Thermolysin , Tyrosine , Energy Transfer , Guanidines , Hot Temperature , Protein Binding , Protein Denaturation , Spectrometry, Fluorescence , Tryptophan
15.
Biochim Biophys Acta ; 495(1): 177-82, 1977 Nov 25.
Article in English | MEDLINE | ID: mdl-562193

ABSTRACT

The effect of calcium ion on the urea denaturation of trypsin has been investigated. By using trypsin immobilized on glass beads, all possibilities of autolysis occurring during the denaturation process are eliminated. It was found that in 8 M urea calcium ion markedly decreases the denaturation rate of the immobilized trypsin. Conversely, the presence of calcium ion markedly accelerates the rate of renaturation of denatured immobilized trypsin. Calcium may exert its stabilizing effect on the tertiary structure of the protein by coordination to the side chains of Asp 194, Ser 190 and the carbonyl group of Ser 139 (using the chymotryptic numbering system).


Subject(s)
Calcium , Enzymes, Immobilized , Trypsin , Urea , Animals , Cattle , Kinetics , Protein Denaturation
17.
Biochemistry ; 15(23): 5017-23, 1976 Nov 16.
Article in English | MEDLINE | ID: mdl-1032992

ABSTRACT

Using fluorescence energy-transfer experiments we have measured the distance between the specificity pocket and the calcium ion binding site of bovine pancreatic trypsin. Proflavin and thionine were used to block the specificity site, whereas various lanthanide ions were substituted for the calcium. It was then possible to choose various donor-acceptor pairs which exhibit suitable energy transfer. We have calculated the distance between proflavin and Nd(III), Pr(III), and Ho(III) to be 10.9, and 10.3, and 10.3 A, respectively. This agrees very well with the value of approximately 10 A we obtained between the methyl protons of p-toluamidine (a competitive inhibitor) and Gd(III) using nuclear magnetic resonance techniques (Abbott, F., Gomez, J.E., Birnbaum, E.R., and Darnall, D.W. (1975), Biochemistry 14, 4935). This is strong evidence that, in solution, the calcium binding site is composed of the side chains of Ser-190 and Asp-194.


Subject(s)
Calcium , Gadolinium , Holmium , Neodymium , Promethium , Trypsin , Amino Acid Sequence , Animals , Binding Sites , Cattle , Proflavine , Protein Binding , Protein Conformation , Species Specificity , Spectrophotometry
18.
Biochemistry ; 14(22): 4935-43, 1975 Nov 04.
Article in English | MEDLINE | ID: mdl-1237314

ABSTRACT

The effect of Gd3+ on the nuclear magnetic resonance (NMR) relaxation rates, T1m-1 and T2m-1, of inhibitor protons in metal-inhibitor-trypsin ternary complexes has been measured. The Solomon-Bloembergen equations have been used to calculate distances of 10.0 +/- 0.5, 8.8 +/- 0.5, and 9.5 +/- 0.5 A between the metal ion and the methyl and ortho protons of p-toluamidine, and the methyl protons of acetamidine, respectively. Essentially the same results are obtained for both alpha-trypsin and beta-trypsin. Binding constants of 3.3 x 10(3) and 4.1 x 10(3) M-1 for the association of Gd(III) with alpha-trypsin and beta-trypsin, respectively, in the presence of p-toluamidine at pH 6.0 have been obtained by equilibrium dialysis. Calcium binding constants of 260 and 3700 M-1 at pH 6.0 and 8.0, respectively, with beta-trypsin have also been obtained. Calcium ion and gadolinium ion compete for the same site on the protein. Calcium has been shown to protect alpha-trypsin from further autolytic degradation to psi-trypsin. From examination of the crystal structure of the enzyme we propose that the calcium ion binding site of bovine trypsin is comprised of the side chains of Asp-194 and Ser-190 (based on the chymotrypsin sequence numbering system). This seems to be the only site which is comprised of at least one carboxyl group; which fits our distance requirements and which is conisistent with other chemical data.


Subject(s)
Calcium , Gadolinium , Trypsin , Animals , Binding Sites , Cattle , Isoenzymes , Kinetics , Magnetic Resonance Spectroscopy , Mathematics , Pancreas/enzymology , Protein Binding , Protein Conformation , Temperature
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