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1.
Org Biomol Chem ; 20(10): 2121-2130, 2022 03 09.
Article in English | MEDLINE | ID: mdl-35225311

ABSTRACT

The anion recognition properties of six synthetic acyclic and macrocyclic carbazole-based receptors have been studied by 1H-NMR as well as with COSMO-RS calculations towards acetate, benzoate, lactate, sorbate and formate. The receptors differed by the number and geometry of hydrogen-bond donor (HBD) sites, the nature and length of the linker(s) between the HBD sites and the cyclic or non-cyclic nature. The binding ability of the receptors is strongly influenced by the structure and steric variables of the receptors and anions. It was found that when urea was replaced with the flexible diglycolyl as the connecting linker between carbazole subunits, the carboxylate binding affinity of the receptor decreased significantly. The effects of the receptors' structure on anion binding have been investigated and several intriguing cases have been identified and analysed. The current findings shed light on carboxylate anion binding and contribute to the systematic synthesis of receptors with beneficial functional selectivity for carboxylate anions.

2.
Anal Chim Acta ; 1132: 123-133, 2020 Oct 02.
Article in English | MEDLINE | ID: mdl-32980103

ABSTRACT

Lipophilicity, usually expressed as octanol-water partition coefficient (logPo/w), is an important property in biomedical research, drug design and technology. However, high logPo/w values of complex hydrogen-bonding molecules are not easy to measure or calculate. Exemplary problematic molecules are prospective active components (ionophores) of polymeric sensor membranes - the working elements of ion-selective electrodes. High lipophilicities of the membrane components are crucial for the sensor lifetime. In this work, lipophilicities of a wide range of urea-, carbazole- and indolocarbazole-based anion receptor molecules (some newly synthesized) and two common plasticizers were determined using a chromatography-based approach and/or the COSMO-RS method. Very high logPo/w values, up to around 20, i.e. far beyond directly experimentally accessible range, were obtained. The agreement between the two approaches ranged from very good to satisfactory. Based on these results, simple fragment-based equations were developed for quick lipophilicity estimation without any specialized software. Membrane-water partition coefficients for the studied compounds were modeled. Limitations and biases of the used methods are discussed.

3.
Beilstein J Org Chem ; 16: 1901-1914, 2020.
Article in English | MEDLINE | ID: mdl-32802207

ABSTRACT

Carboxylate sensing solid-contact ion-selective electrodes (ISEs) were created to provide a proof-of-concept ISE development process covering all aspects from in silico ionophore design to functional sensor characterization. The biscarbazolylurea moiety was used to synthesize methylene-bridged macrocycles of different ring size aiming to fine tune selectivity towards different carboxylates. Cyclization was achieved with two separate strategies, using either amide synthesis to access up to -[CH2]10- macrocycles or acyl halides to access up to -[CH2]14- macrocycles. Seventy-five receptor-anion complexes were modelled and studied with COSMO-RS, in addition to all free host molecules. In order to predict initial selectivity towards carboxylates, 1H NMR relative titrations were used to quantify binding in DMSO-d 6/H2O solvent systems of two proportions - 99.5%:0.5% m/m and 90.0%:10.0% m/m, suggesting initial selectivity towards acetate. Three ionophores were selected for successful sensor prototype development and characterization. The constructed ion-selective electrodes showed higher selectivity towards benzoate than acetate, i.e., the selectivity patterns of the final sensors deviated from that predicted by the classic titration experiments. While the binding constants obtained by NMR titration in DMSO-d 6/H2O solvent systems provided important guidance for sensor development, the results obtained in this work emphasize the importance of evaluating the binding behavior of receptors in real sensor membranes.

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