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1.
J Mol Neurosci ; 68(2): 214-220, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30911941

ABSTRACT

Dopa-responsive dystonia (DRD), a movement disorder, is characterized by young onset dystonia and dramatic response to levodopa treatment. However, the wide range of phenotypic spectrum of the disease often leads to misdiagnosis. DRD is usually caused by mutation in GCH1 gene coding for GTP cyclohydrolase 1 (GTPCH1) enzyme, which is involved in biosynthesis of tetrahydrobiopterin (BH4) and dopamine. In this study, the entire GCH1 gene was screened in 14 Indian DRD patients and their family members. A family was identified where the proband was found to be a compound heterozygote for GCH1 (p.R184H and p.V204I) variants; the former variant being inherited from the father and the latter from the mother. All other family members harboring one of these GCH1 variants were asymptomatic except for one (heterozygous for p.R184H) who was diagnosed with DRD. In silico analyses predicted these two variants to be pathogenic and disruptive to GCH1enzymatic activity. This proband was misdiagnosed as cerebral palsy and remained untreated for 25 years. He developed retrograde movements and gait problems in lower limbs, deformity in upper limbs, and difficulty in swallowing, and became mute. However, most of his symptoms were alleviated upon levodopa administration. Our study confirms the variability of DRD phenotype and the reduced penetrance of GCH1 mutations. It also emphasizes the need of molecular diagnostic test and L-dopa trial especially for those with atypical DRD phenotype.


Subject(s)
Dystonic Disorders/genetics , GTP Cyclohydrolase/genetics , Mutation , Adolescent , Adult , Aged , Aged, 80 and over , Child , Diagnosis, Differential , Dystonic Disorders/pathology , Female , GTP Cyclohydrolase/chemistry , GTP Cyclohydrolase/metabolism , Heterozygote , Humans , Infant , Male , Middle Aged , Pedigree , Penetrance
2.
Neurosci Lett ; 675: 68-73, 2018 05 14.
Article in English | MEDLINE | ID: mdl-29604408

ABSTRACT

BACKGROUND: Parkinson's disease (PD) is the second most common neurodegenerative disease and has a complex etiology. Single nucleotide polymorphisms in the 3'-untranslated region of Fibroblast growth factor 20 (FGF 20) have been reported to be associated with PD; however, the results are controversial. Although FGF20 enhances the survival of dopaminergic neurons, it may also result in PD susceptibility by altering alpha-synuclein expression. MATERIALS AND METHODS: To identify and characterize genetic risk variants in FGF 20 in Eastern Indian PD patients, 2 SNPs of FGF 20 (rs1721100 and rs2720208) were genotyped in 336 PD cases and 313 ethnically matched controls by PCR-RFLP. RESULTS: We observed statistically significant differences in genotypic and allelic frequencies of rs1721100 between PD cases and controls but not for rs12720208. Haplotype G-C showed a significant protective effect against PD. A functional assay revealed that the risk allele C at rs1721100 has little or no effect on relative luciferase activity from a reporter construct in the presence of miR-3189-3p, whereas allele G results in significant dose-dependent reduction. CONCLUSION: Our results suggest that FGF 20 is a susceptibility gene for PD in Eastern Indians.


Subject(s)
Fibroblast Growth Factors/genetics , Parkinson Disease/genetics , 3' Untranslated Regions , Adult , Female , Gene Frequency , Genetic Predisposition to Disease , Genetic Variation , Haplotypes , Humans , India , Male , Middle Aged , Polymorphism, Single Nucleotide , Risk Factors
3.
PLoS One ; 10(9): e0137072, 2015.
Article in English | MEDLINE | ID: mdl-26368928

ABSTRACT

Congenital stationary night blindness (CSNB) is a non-progressive, clinically and genetically heterogeneous disease of impaired night vision. We report a naturally-occurring, stationary, autosomal recessive phenotype in beagle dogs with normal daylight vision but absent night vision. Affected dogs had normal retinas on clinical examination, but showed no detectable rod responses. They had "negative-type" mixed rod and cone responses in full-field ERGs. Their photopic long-flash ERGs had normal OFF-responses associated with severely reduced ON-responses. The phenotype is similar to the Schubert-Bornschein form of complete CSNB in humans. Homozygosity mapping ruled out most known CSNB candidates as well as CACNA2D4 and GNB3. Three remaining genes were excluded based on sequencing the open reading frame and intron-exon boundaries (RHO, NYX), causal to a different form of CSNB (RHO) or X-chromosome (NYX, CACNA1F) location. Among the genes expressed in the photoreceptors and their synaptic terminals, and mGluR6 cascade and modulators, reduced expression of GNAT1, CACNA2D4 and NYX was observed by qRT-PCR in both carrier (n = 2) and affected (n = 2) retinas whereas CACNA1F was down-regulated only in the affecteds. Retinal morphology revealed normal cellular layers and structure, and electron microscopy showed normal rod spherules and synaptic ribbons. No difference from normal was observed by immunohistochemistry (IHC) for antibodies labeling rods, cones and their presynaptic terminals. None of the retinas showed any sign of stress. Selected proteins of mGluR6 cascade and its modulators were examined by IHC and showed that PKCα weakly labeled the rod bipolar somata in the affected, but intensely labeled axonal terminals that appeared thickened and irregular. Dendritic terminals of ON-bipolar cells showed increased Goα labeling. Both PKCα and Goα labeled the more prominent bipolar dendrites that extended into the OPL in affected but not normal retinas. Interestingly, RGS11 showed no labeling in the affected retina. Our results indicate involvement of a yet unknown gene in this canine model of complete CSNB.


Subject(s)
Eye Diseases, Hereditary/genetics , Eye Diseases, Hereditary/pathology , Genetic Diseases, X-Linked/genetics , Genetic Diseases, X-Linked/pathology , Genetic Predisposition to Disease/genetics , Myopia/genetics , Myopia/pathology , Night Blindness/genetics , Night Blindness/pathology , Retina/physiopathology , Animals , Calcium Channels, L-Type/genetics , Calcium Channels, L-Type/metabolism , Disease Models, Animal , Dogs , Eye Diseases, Hereditary/metabolism , Eye Diseases, Hereditary/physiopathology , Female , Gene Expression Regulation , Genetic Diseases, X-Linked/metabolism , Genetic Diseases, X-Linked/physiopathology , Heterotrimeric GTP-Binding Proteins/genetics , Heterotrimeric GTP-Binding Proteins/metabolism , Humans , Male , Myopia/metabolism , Myopia/physiopathology , Night Blindness/metabolism , Night Blindness/physiopathology , Pedigree , Presynaptic Terminals/metabolism , Presynaptic Terminals/physiology , Proteoglycans/genetics , Proteoglycans/metabolism , RGS Proteins/genetics , RGS Proteins/metabolism , Retinal Cone Photoreceptor Cells/metabolism , Retinal Cone Photoreceptor Cells/physiology
4.
Neurol India ; 61(5): 457-66, 2013.
Article in English | MEDLINE | ID: mdl-24262445

ABSTRACT

Movement disorder (MD) is an important branch of neurology and has great potentiality in management because of improved diagnosis and therapeutic strategies. Over the last three decades, emphasis has been laid on the evaluation of various MDs in India by a limited number of interested neurologists and basic scientists. In this review, we want to highlight common problems of MDs in India with regard to epidemiology, clinical features and genetics.


Subject(s)
Movement Disorders/diagnosis , Disease Management , Humans , India/epidemiology , Movement Disorders/epidemiology , Movement Disorders/genetics , Prevalence , Risk Factors , Survival Rate
6.
Dis Markers ; 32(6): 355-62, 2012.
Article in English | MEDLINE | ID: mdl-22684232

ABSTRACT

Leucine rich repeat kinase 2 (LRRK2) gene defects cause Parkinson's disease (PD). Recently, LRRK2 has also been shown by genome wide association (GWA) studies to be a susceptibility gene for the disease. In India mutations in LRRK2 is a rare cause of PD. We, therefore, genotyped 64 SNPs across LRRK2 in 161 control samples and finally studied 6 haplotype tagging SNPs for association-based study on 300 cases and 446 ethnically matched controls to explore the potential role of LRRK2 as a susceptibility gene in PD for East Indians. We did not find any significant allele/ genotype or haplotype associations with PD suggesting that common genetic variants within LRRK2 play limited role in modulating PD among East Indians. In addition, we also screened for the common mutations (viz. p.R1441C, p.R1441G, p.R1441H, p.Y1699C, p.G2019S), and a risk variant common among Asians (p.G2385R) but did not observe any of the above mentioned variants in our cohort. Our study, therefore, strongly suggests that LRRK2 has minimal role as a candidate and susceptibility gene in PD pathogenesis among East Indians.


Subject(s)
Genetic Predisposition to Disease , Parkinson Disease/genetics , Polymorphism, Single Nucleotide , Protein Serine-Threonine Kinases/genetics , Adult , Age of Onset , Aged , Biomarkers/analysis , Case-Control Studies , Cohort Studies , Female , Gene Frequency , Genetic Association Studies , Genetic Testing , Genome, Human , Haplotypes , Humans , India/epidemiology , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2 , Male , Middle Aged , Mutation , Parkinson Disease/epidemiology , Parkinson Disease/pathology , Prevalence , Young Adult
7.
Neurobiol Aging ; 33(7): 1485.e9-15, 2012 Jul.
Article in English | MEDLINE | ID: mdl-21130530

ABSTRACT

Glycogen synthase kinase-3ß (GSK3B) and cyclin-dependent kinase 5 (CDK5) are the 2 major protein kinases involved in abnormal phosphorylation of tau. To determine their potential role in the pathogenesis of Parkinson's disease (PD) we analyzed 2 functional single nucleotide polymorphisms (SNPs) of GSK3B (rs334558 and rs6438552) and rs735555 of CDK5 regulatory subunit 1 (CDK5R1) in 373 PD cases and 346 healthy controls of eastern India. The C,C and T,C haplotypes of GSK3B were respectively moderately associated with increased risk and protection for late onset PD (LOPD) (odds ratio [OR], 1.399; 95% confidence interval [CI], 1.069-1.829; p = 0.015, and OR, 0.436; 95% CI, 0.222-0.853; p = 0.016, respectively). Moreover, moderate to significant interaction between different loci were observed for the entire PD cohort or late onset PD only. However, among these interactions, individuals carrying the (C/C) genotype at both loci (rs6438552 and rs735555) had almost twice the risk of developing PD than those without this genotypic combination (OR, 1.871; 95% CI, 1.181-2.964; p = 0.009). Thus, synergistic effect between the 2 major tau kinases, through these SNPs, appears to determine the risk profile for PD.


Subject(s)
Glycogen Synthase Kinase 3/physiology , Nerve Tissue Proteins/physiology , Parkinson Disease/epidemiology , Parkinson Disease/metabolism , tau Proteins/metabolism , Adult , Cohort Studies , Female , Glycogen Synthase Kinase 3 beta , Humans , India/epidemiology , Male , Middle Aged , Parkinson Disease/genetics , Polymorphism, Single Nucleotide/genetics , Risk Factors , tau Proteins/genetics
9.
Neurosci Lett ; 460(1): 16-20, 2009 Aug 21.
Article in English | MEDLINE | ID: mdl-19450659

ABSTRACT

Parkinson's disease (PD) is a neurodegenerative disease of the central nervous system and its prevalence increases with age. Microtubule-associated protein tau (MAPT), a neuronal protein is involved in the pathogenesis of several neurodegenerative diseases including PD. To determine the broader significance of this association with PD, replicative studies in distinct ethnic populations are required. In this study, we investigated MAPT for its potential association with PD using five haplotype-tagging SNPs and the del-In9 polymorphism of MAPT in 301 PD patients and 243 healthy controls from eastern India. Our case-control analysis did not show a significant association with any of the markers and PD. However, a risk haplotype [GAC+G] for PD was identified (OR=1.563; 95% CI=1.045-2.337; p=0.03). In addition, haplotype AAC+A (OR=2.787; 95% CI=1.372-5.655; p=0.004) was strongly associated with early onset PD (age at onset < or =40 years) and AAC+G haplotype showed a weak association (OR=2.233; 95% CI=1.018-4.895; p=0.045) with late onset PD (age at onset >40 years). This observation highlights the significance of rs7521 in modifying the age at onset of PD under a common haplotype background. We also identified AGC+A as a risk haplotype for sporadic cases (OR=2.773, 95% CI=1.198-6.407, p=0.016). This is the first association study from India conducted on MAPT among PD patients and provides valuable information for comparison with other ethnic groups.


Subject(s)
Gene Deletion , Genetic Predisposition to Disease , Parkinson Disease/etiology , Parkinson Disease/genetics , Polymorphism, Single Nucleotide/genetics , tau Proteins/genetics , Adult , Case-Control Studies , Confidence Intervals , Female , Gene Frequency , Genotype , Humans , India/ethnology , Linkage Disequilibrium/genetics , Male , Middle Aged , Odds Ratio
10.
Parkinsonism Relat Disord ; 12(7): 420-6, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16793319

ABSTRACT

Parkinson's disease (PD), the second most common neurodegenerative disorder, affects at least 1% of the population over the age of 50. However, very little information is available regarding the molecular basis of PD among Indians. Since the largest number of mutations have been detected in the Parkin gene among all known PD loci, we aim to use Parkin as the candidate gene to assess its role in PD-related pathogenesis in Indian patients. A total of 138 PD patients, with the mean age of onset being 47+/-14 (age range, 5-77 years), and 100 controls were recruited for the study from eastern India. Parkin mutations were detected by amplification of exons of the gene along with the flanking splice junctions by polymerase chain reaction, single-stranded conformation polymorphism and DNA sequencing. A total of 18 nucleotide variants including six novel changes were detected. These include five missense mutations (Gln34Arg, Arg42Cys, Arg42His, Tyr143Cys and Arg334Cys) detected in eight patients in heterozygous condition and a homozygous deletion encompassing exons 3 and 4 in two sibs affected with PD. Clinical features of the Parkin mutants were compared. Among eastern Indian PD patients, mutation in Parkin was identified in 7.24% cases.


Subject(s)
Mutation, Missense , Parkinson Disease/ethnology , Parkinson Disease/genetics , Ubiquitin-Protein Ligases/genetics , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Exons/genetics , Female , Gene Frequency , Genetic Predisposition to Disease/epidemiology , Humans , India/epidemiology , Male , Middle Aged , Pedigree , Polymorphism, Single Nucleotide , Prevalence
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