Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 17 de 17
Filter
Add more filters










Publication year range
1.
Inorg Chem ; 2024 Jul 09.
Article in English | MEDLINE | ID: mdl-38982748

ABSTRACT

Our study introduces the design of inverse sandwich (iSw) complexes incorporating a noble gas compound: xenon trioxide (XeO3). Through comprehensive computational analyses, we have investigated the critical factors influencing their stability by employing a variety of state-of-the-art computational tools. We demonstrated that the coordination number of xenon in the iSw complex of XeO3 with 18-crown-6 is influenced by the presence of a rare, weakly stabilizing Xe···Xe interaction between the XeO3 molecules. Furthermore, we observed that the stability of iSw complexes of 1,3,5-triphenylbenzene (TPB) and its derivatives is not solely attributed to aerogen bonding, but also involves contributions from C-H···O interactions and back-donation from the lone pair of Xe to the antibonding C-C orbitals of TPB. Additionally, the significant contributions from orbital interactions and dispersion interactions in the TPB derivatives highlight the multifaceted amphoteric properties of XeO3 and reveal that the iSw complexes of TPB and derivatives are not predominantly governed by electrostatic interactions, contrary to conventional belief.

2.
Chemphyschem ; : e202400302, 2024 Jun 06.
Article in English | MEDLINE | ID: mdl-38842521

ABSTRACT

Various aza-crowns with different sizes and substituents have been explored computationally as potential hosts for stabilizing the explosive guest xenon trioxide (XeO3) through σ-hole-mediated aerogen bonding interactions. Interestingly, aza-crowns demonstrate superior binding towards XeO3 compared to their oxygen and thio counterparts. However, unlike the latter cases, where the binding was found to be increasingly favorable with the increase in the size of the crowns, aza-crowns exhibit a variable size preference for XeO3, peaking with aza-15-crown-5, and reducing thereafter with increase in crown size.

3.
Inorg Chem ; 63(9): 4099-4107, 2024 Mar 04.
Article in English | MEDLINE | ID: mdl-38373012

ABSTRACT

In pursuit of enhancing the stability of the highly explosive and shock-sensitive compound XeO3, we performed quantum chemical calculations to investigate its possible complexation with electron-rich crown ethers, including 9-crown-3, 12-crown-4, 15-crown-5, 18-crown-6, and 21-crown-7, as well as their thio analogues. Furthermore, we expanded our study to other noble gas trioxides (NgO3), namely, KrO3 and ArO3. The basis set superposition error (BSSE) corrected interaction energies for these adducts range from -13.0 kcal/mol to -48.2 kcal/mol, which is notably high for σ-hole-mediated noncovalent interactions. The formation of these adducts was observed to be more favorable with the increase in the ring size of the crowns and less favorable while going from XeO3 to ArO3. A comprehensive analysis by various computational tools such as the mapping of the electrostatic potential (ESP), Wiberg bond indices (WBIs), Bader's theory of atoms-in-molecules (AIM), natural bond orbital (NBO) analysis, noncovalent interaction (NCI) plots, and energy decomposition analysis (EDA) revealed that the C-H···O interactions, as well as dispersion interactions, play a pivotal role in stabilizing adducts involving larger crowns. A noteworthy outcome of our study is the revelation of a coordination number of 9 for xenon in the complex formed between XeO3 and the thio analogue of 18-crown-6, which is higher than the largest number reported to date.

4.
Chemphyschem ; 25(6): e202300908, 2024 Mar 15.
Article in English | MEDLINE | ID: mdl-38240413

ABSTRACT

In order to control the explosiveness and shock sensitivity of XeO3 , we have investigated its plausible interaction with various non-aromatic coordinating solvents, serving as potential Lewis base donors, through density functional theory (DFT) calculations. Out of twenty six such solvents, the top ten were thus identified and then thoroughly examined by employing various computational tools such as the mapping of the electrostatic potential surface (MESP), Wiberg bond indices (WBIs), non-covalent interaction (NCI) plots, Bader's theory of atoms-in-molecules (AIM), natural bond orbital (NBO) analysis, and the energy decomposition analysis (EDA). The amphoteric nature of XeO3 was also explored by investigating the extent of back donation from the lone pair of Xe to the antibonding orbital of the donating atom/group of the solvent molecules. The C-H…O interactions were also found to be a contributing factor in the stabilization of these adducts. Although these aerogen-bonding interactions were found to be predominantly electrostatic, significant contributions from the orbital contributions, as well as dispersion interactions, were observed. The top three non-aromatic solvents (among the twenty six studied) which form the strongest adducts with XeO3 are proposed to be hexamethylphosphoramide (HMPA), N,N'-dimethylpropyleneurea (DMPU) and tetramethylethylenediamine (TMEDA).

5.
Chempluschem ; 88(8): e202300273, 2023 Aug.
Article in English | MEDLINE | ID: mdl-37409641

ABSTRACT

In this work, 5-SIDipp [SIDipp=1,3-bis(2,6-diisopropylphenyl)-imidazolin-2-ylidene] (1) derived Chichibabin's hydrocarbon with an octafluorobiphenylene spacer (3) has been reported. The addition of two equivalents of 5-SIDipp with decafluorobiphenyl in presence of BF3 gives the double C-F bond activated imidazolium salt with two tetrafluoroborate anions, 2. Further reduction of 2 gives the fluorine substituted 5-SIDipp based Chichibabin's hydrocarbon, 3. Quantum chemical calculations suggested a singlet state of 3 with a singlet-triplet energy gap (ΔES-T ) of 3.7 kcal mol-1 , which is substantially lower with respect to the hydrogen substituted NHC-based Chichibabin's hydrocarbons (10.7 kcal mol-1 , B3LYP). As a result, the diradical character (y) of 3 (y=0.62) is also noticeably higher than the hydrogen substituted CHs (y=0.41-0.43). The ▵ES-T was found to be higher in CASSCF (22.24 kcal mol-1 ) and CASPT2 (11.17 kcal mol-1 ) for 3 and the diradical character (d) is 44.6 %.

6.
Chem Commun (Camb) ; 58(84): 11843-11846, 2022 Oct 20.
Article in English | MEDLINE | ID: mdl-36193808

ABSTRACT

Herein, we report two 2,2'-pyridylpyrrolide (PyPyrH) ligand supported magnesium complexes (1 and 2), which demonstrate bright luminescence with a quantum yield of 22% and 14% in the solid state, respectively. Theoretical calculations reveal that their emissive properties originate from the intra- and inter-ligand charge transfer.


Subject(s)
Luminescence , Magnesium , Ligands , Molecular Structure
7.
ACS Omega ; 7(14): 11742-11755, 2022 Apr 12.
Article in English | MEDLINE | ID: mdl-35449912

ABSTRACT

This study investigates four machine-learning (ML) models to predict the redox potentials of phenazine derivatives in dimethoxyethane using density functional theory (DFT). A small data set of 151 phenazine derivatives having only one type of functional group per molecule (20 unique groups) was used for the training. Prediction accuracy was improved by a combined strategy of feature selection and hyperparameter optimization, using the external validation set. Models were evaluated on the external test set containing new functional groups and diverse molecular structures. High prediction accuracies of R 2 > 0.74 were obtained on the external test set. Despite being trained on the molecules with a single type of functional group, models were able to predict the redox potentials of derivatives containing multiple and different types of functional groups with good accuracies (R 2 > 0.7). This type of performance for predicting redox potential from such a small and simple data set of phenazine derivatives has never been reported before. Redox flow batteries (RFBs) are emerging as promising candidates for energy storage systems. However, new green and efficient materials are required for their widespread usage. We believe that the hybrid DFT-ML approach demonstrated in this report would help in accelerating the virtual screening of phenazine derivatives, thus saving computational and experimental costs. Using this approach, we have identified promising phenazine derivatives for green energy storage systems such as RFBs.

8.
Antioxidants (Basel) ; 11(2)2022 Feb 10.
Article in English | MEDLINE | ID: mdl-35204236

ABSTRACT

COVID-19-a severe acute respiratory syndrome disease caused by coronavirus 2 (SARS-CoV-2)-has recently attracted global attention, due to its devastating impact, to the point of being declared a pandemic. The search for new natural therapeutic drugs is mandatory, as the screening of already-known antiviral drugs so far has led to poor results. Several species of marine algae have been reported as sources of bioactive metabolites with potential antiviral and immunomodulatory activities, among others. Some of these bioactive metabolites might be able to act as antimicrobial drugs and also against viral infections by inhibiting their replication. Moreover, they could also trigger immunity against viral infection in humans and could be used as protective agents against COVID-In this context, this article reviews the main antiviral activities of bioactive metabolites from marine algae and their potential exploitation as anti-SARS-CoV-2 drugs.

9.
Nat Commun ; 13(1): 854, 2022 Feb 14.
Article in English | MEDLINE | ID: mdl-35165287

ABSTRACT

The catalytic asymmetric borylation of conjugated carbonyls followed by stereoselective intramolecular cascade cyclizations with in situ generated chiral enolates are extremely rare. Herein, we report the enantioselective Cu(I)-catalyzed ß-borylation/Michael addition on prochiral enone-tethered 2,5-cyclohexadienones. This asymmetric desymmetrization strategy has a broad range of substrate scope to generate densely functionalized bicyclic enones bearing four contiguous stereocenters with excellent yield, enantioselectivity, and diastereoselectivity. One-pot borylation/cyclization/oxidation via the sequential addition of sodium perborate reagent affords the corresponding alcohols without affecting yield and enantioselectivity. The synthetic potential of this reaction is explored through gram-scale reactions and further chemoselective transformations on products. DFT calculations explain the requirement of the base in an equimolar ratio in the reaction, as it leads to the formation of a lithium-enolate complex to undergo C-C bond formation via a chair-like transition state, with a barrier that is 22.5 kcal/mol more favourable than that of the copper-enolate complex.

10.
Front Chem ; 9: 679750, 2021.
Article in English | MEDLINE | ID: mdl-34222195

ABSTRACT

At the dawn of the Universe, the ions of the light elements produced in the Big Bang nucleosynthesis recombined with each other. In our present study, we have tried to mimic the conditions in the early Universe to show how the recombination process would have led to the formation of the first ever formed diatomic species of the Universe: HeH+, as well as the subsequent processes that would have led to the formation of the simplest triatomic species: H3 +. We have also studied some special cases: higher positive charge with fewer number of hydrogen atoms in a dense atmosphere, and the formation of unusual and interesting linear, dicationic He chains beginning from light elements He and H in a positively charged atmosphere. For all the simulations, the ab initio nanoreactor (AINR) dynamics method has been employed.

11.
Chem Sci ; 12(26): 8996-9003, 2021 Jul 07.
Article in English | MEDLINE | ID: mdl-34276927

ABSTRACT

A phosphite mediated stereoretentive C-H alkylation of N-alkylpyridinium salts derived from chiral primary amines was achieved. The reaction proceeds through the activation of the N-alkylpyridinium salt substrate with a nucleophilic phosphite catalyst, followed by a base mediated [1,2] aza-Wittig rearrangement and subsequent catalyst dissociation for an overall N to C-2 alkyl migration. The scope and degree of stereoretention were studied, and both experimental and theoretical investigations were performed to support an unprecedented aza-Wittig rearrangement-rearomatization sequence. A catalytic enantioselective version starting with racemic starting material and chiral phosphite catalyst was also established following our understanding of the stereoretentive process. This method provides efficient access to tertiary and quaternary stereogenic centers in pyridine systems, which are prevalent in drugs, bioactive natural products, chiral ligands, and catalysts.

12.
Org Lett ; 23(3): 890-895, 2021 Feb 05.
Article in English | MEDLINE | ID: mdl-33443431

ABSTRACT

A thermal O-to-C [1,3]-rearrangement of α-hydroxy acid derived enol ethers was achieved under mild conditions. The 2-aminothiophenol protection of carboxylic acids facilitates formation of the [1,3] precursor and its thermal rearrangement via stabilization of a radical intermediate. Experimental and theoretical evidence for dissociative radical pair formation, its captodative stability via aminothiophenol, and a unique solvent effect are presented. The aminothiophenol was deprotected from rearrangement products as well as after derivatization to useful synthons.

13.
Nanoscale Adv ; 4(1): 150-162, 2021 Dec 21.
Article in English | MEDLINE | ID: mdl-36132949

ABSTRACT

A series of Cu-Ag bimetal alloys decorated on SiO2 and the fabrication of few-layer S-doped graphitic carbon nitride (SC) warped over it to form a core-shell nanostructured morphology have been demonstrated and well characterized through various physiochemical techniques. HRTEM data confirmed the formation of a compact nanojunction between the SiO2 and SC, where Cu-Ag is embedded uniformly with an average particle size of 1.3 nm. The Ag : Cu (1 : 3) between SiO2 and SC produces 1730 µmol h-1 g-1 of H2 under visible light illumination. Moreover, 6.2-fold current enhancement in the case of Ag : Cu (1 : 3) as compared to the Ag-loaded core-shell nanostructured photocatalyst indicates higher electron-hole-pair separation. The excellent activity was due to the synergistic alloying and plasmonic effect of Ag and Cu. DFT studies reveal that the Cu atom in the Cu-Ag bimetal alloy plays a pivotal role in the generation of H2, and the reaction proceeds via a 4-membered transition state. The mechanistic insight proceeds from the generation of hot electrons due to the LSPR effect and their transfer to the SC layer via a compact nanojunction.

14.
Int J Phytoremediation ; 23(3): 238-251, 2021.
Article in English | MEDLINE | ID: mdl-32866037

ABSTRACT

Aluminum metal pollution is considered as a primary limiting factor that reduced crop yield in South Asian subtropical country like India. In national context, Odisha contributes around more than 40% of total ore availability. Moreover, industrial mining and smelting aid are major concern for aluminum metal toxicity in territorial vicinity affecting the soil fertility, ecosystem and human health through food chain. The aluminum metal accumulation limits the soil fertility by antagonistic regulation of photosynthetic and nitrogen fixing microbiota. The increasing concern regarding aluminum pollution enterprise critical investigations for their bioremediation in contamination sites. In this notion, the current study was hypothesized to decrypt the rate limiting factors, their explicit mode of action and intracellular detoxification in a cyanobacterium, i.e., Westiellopsis prolifica isolated from ash pond of NALCO (National Aluminum Company Limited), Angul, Odisha. In the experimental setup, treatment with different concentrations of AlCl3 (0-0.1 mM) was marked a decline in the growth of the strain due to the adverse regulation of photosynthetic pigments. However, the enforcement of catalase (CAT), ascorbate peroxidase (APX), superoxide dismutase (SOD), guaiacol peroxidase (GPX) and glutathione reductase (GR) was critical for sustaining strain viability under oxidative imbalance. The observation of an increase in the antioxidant enzyme and MDA content was evident to sustain strain viability under such oxidative imbalance. The outcome of the anticipated study was apparent to demonstrate a colossal interlink between Al mediated induction of oxidative stress and their cellular detoxification via intracellular antioxidant enzymes and removal of H2O2 accumulation in cyanobacterium, W. prolifica. Statement of novelty Aluminum metal toxicity renders growth of Westiellopsis prolifica via affecting photosynthesis associated pigments. Westiellopsis prolifica deploys antioxidant defense enzymes to combat against aluminum mediated oxidative upset. Intracellular antioxidant enzymes provoke cellular survival of Westiellopsis prolifica under excessive uptake of aluminum in contaminated habitats.


Subject(s)
Aluminum , Antioxidants , Aluminum/toxicity , Ascorbate Peroxidases/metabolism , Biodegradation, Environmental , Catalase/metabolism , Cyanobacteria , Ecosystem , Hydrogen Peroxide , India , Oxidative Stress , Superoxide Dismutase/metabolism
15.
Acta Crystallogr B Struct Sci Cryst Eng Mater ; 76(Pt 5): 850-864, 2020 Oct 01.
Article in English | MEDLINE | ID: mdl-33017318

ABSTRACT

The synthetically modified green fluorescent protein chromophore analogue 3,4,5-trimethoxybenzylidene imidazolinone (1) yielded five polymorphs (I, II, III, IV, V) concomitantly irrespective of the solvent used for crystallization. The pentamorphic modification of 1 is solely due to the interplay of iso-energetic weak intermolecular interactions in molecular associations as well as the conformational flexibility offered by a C-C single bond, which connects the electron-deficient moiety imidazolinone with the electron-rich trimethoxybenzylidene group. A common structural feature observed in all the polymorphs is the formation of a `zero-dimensional' centrosymmetric dimeric unit through a short and linear C-H...O hydrogen bond engaging phenyl C-H and imidazolinone carbonyl oxygen. However, the networking of these dimeric units showed a subtle difference in all the polymorphs. The 2D isostructurality was observed between polymorphs I, II and III, while the other two polymorphs IV and V revealed only `zero-dimensional' isostructurality. The different fluorescence emissions of Form I (blue) and Forms II to V (yellow) were attributed to the differences in π-stacking interactions. It shows that one can modulate the photophysical properties of these smart materials by slightly altering their crystal structure. Such an approach will aid in developing new multi-colour organic fluorescent materials of varying crystal structures for live-cell imaging and fluorescent sensing applications.


Subject(s)
Benzylidene Compounds/chemistry , Green Fluorescent Proteins/chemistry , Imidazolines/chemistry , Luminescent Agents/chemistry , Crystallization , Crystallography, X-Ray , Hydrogen Bonding , Models, Molecular
16.
Int J Biol Macromol ; 164: 4263-4278, 2020 Dec 01.
Article in English | MEDLINE | ID: mdl-32916197

ABSTRACT

Fucoidan is a complex polysaccharide (molecular weight 10,000-100,000 Da) derived from brown algae which comprises of L-fucose and sulfate groups have potential as therapeutic diligences against several human diseases. The fucoidan has expanded a widespread range of pharmacological properties as an anti-inflammatory, anticoagulant, antiangiogenic, immunomodulatory, anti-adhesive, anticancer, antidiabetic, antiviral and anti-neurodegenerative agents owing to their diverse chemical conformation and potent antioxidant activity. The antioxidant and immunomodulatory activities of the fucoidan contribute towards their disease preventive potency through dynamic modulation of key intracellular signalling pathways, regulation of ROS accumulation, and maintenance of principal cell survival and death pathways. Additionally, it also reduces cancer-associated cachexia. Despite the wide range of therapeutic potency, the fucoidan is heavily regarded as an unexplored plethora of druggable entities in the current situation. The isolation, screening, biological application, pre-clinical, and clinical assessment along with large scale cost-effective production remain a foremost task to be assessed. Moreover, the chemical synthesis of the present bioactive drug with confirmational rearrangement for enhanced availability and bioactivity also need tenacious investigation. Hence, in the present review, we give attention to the source of isolation of fucoidan, their principle strategic deployment in disease prevention, and the mechanistic investigation of how it works to combat different diseases that can be used for future therapeutic intervention.


Subject(s)
Aquatic Organisms/chemistry , Polysaccharides/chemistry , Sulfates/chemistry , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/pharmacology , Chemical Fractionation/methods , Disease Susceptibility , Drug Discovery , Health , Humans , Immunomodulation/drug effects , Metabolic Detoxication, Phase I , Molecular Structure , Polysaccharides/isolation & purification , Seaweed/chemistry , Structure-Activity Relationship
17.
ACS Appl Mater Interfaces ; 11(43): 40134-40150, 2019 Oct 30.
Article in English | MEDLINE | ID: mdl-31584789

ABSTRACT

Metal-organic frameworks (MOFs) show distinctive superiority for carbon dioxide (CO2) capture and luminescent sensing of toxic pollutants over other materials, where combination of both of these properties together with improvement of hydrolytic stability and pore functionality is critical to environmental remediation applications. The Ni(II) framework [Ni2(µ2-OH)(azdc)(tpim)](NO3)·6DMA·6MeOH (CSMCRI-3) (tpim = 4,4',4″-(1H-imidazole-2,4,5-triyl)tripyridine, H2azdc = azobenzene-4,4'-dicarboxylic acid, DMA = dimethylacetamide, CSMCRI = Central Salt & Marine Chemicals Research Institute), encompassing cationic [Ni2(µ2-OH)(CO2)2] SBUs, is solvothermally synthesized from nitrogen-rich and highly fluorescent organic struts. The noninterpenetrated structure, containing free nitrogen atom affixed microporous channels, is stable in diverse organic solvents and weakly basic and acidic aqueous solutions. The activated MOF (3a) exhibits strong CO2-framework interaction and extremely selective CO2 adsorption over N2 (292.5) and CH4 (11.7). Importantly, water vapor exposure does not affect the surface area and/or multiple CO2 uptake-release cycles, signifying potential of the porous structure for long-term use under humid conditions. Aqueous-phase sensing studies illustrate extremely specific and ultrafast detection of explosive 2,4,6-trinitrophenol (TNP) via remarkable fluorescence quenching (KSV = 1.3 × 105 M-1), with a 0.25 ppm limit of detection (LOD). Furthermore, 3a serves as unique luminescent probe for highly discriminative and quick responsive detection of three noxious oxo-anions (Cr2O72-, CrO42-, MnO4-) in water via noteworthy turn-off responses and extreme low LODs (Cr2O72- 0.9; CrO42- 0.29; MnO4- 0.25 ppm). It is imperative to stress the outstanding reusability of the MOF toward multicyclic sensing of all four major water contaminants, alongside visible colorimetric changes upon individual analyte detection. Mechanistic insights in light of the electron transfer route together with density functional theory calculations portray the influence of pore functionalization in framework-analyte interactions, including alternation in energy levels, where varying degrees of contribution of energy transfer explicitly authenticates high quenching of the material.

SELECTION OF CITATIONS
SEARCH DETAIL
...