Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 154
Filter
Add more filters










Publication year range
1.
Proc Natl Acad Sci U S A ; 98(4): 1370-5, 2001 Feb 13.
Article in English | MEDLINE | ID: mdl-11171957

ABSTRACT

The proline-rich gamma-carboxyglutamic acid (Gla) proteins (PRGPs) 1 and 2 are the founding members of a family of vitamin K-dependent single-pass integral membrane proteins characterized by an extracellular amino terminal domain of approximately 45 amino acids that is rich in Gla. The intracellular carboxyl terminal region of these two proteins contains one or two copies of the sequence PPXY, a motif present in a variety of proteins involved in such diverse cellular functions as signal transduction, cell cycle progression, and protein turnover. In this report, we describe the cloning of the cDNAs for two additional human transmembrane Gla proteins (TMG) of 20-24 kDa named TMG3 and TMG4. These two proteins possess extracellular Gla domains with 13 or 9 potential Gla residues, respectively, followed by membrane-spanning hydrophobic regions and cytoplasmic carboxyl terminal regions that contain PPXY motifs. This emerging family of integral membrane Gla proteins includes proline-rich Gla protein (PRGP) 1, PRGP2, TMG3, and TMG4, all of which are characterized by broad and variable distribution in both fetal and adult tissues. Members of this family can be grouped into two subclasses on the basis of their gene organization and amino acid sequence. These observations suggest novel physiological functions for vitamin K beyond its known role in the biosynthesis of proteins involved in blood coagulation and bone development. The identification and characterization of these proteins may allow a more complete understanding of the teratogenic consequences of exposure in utero to vitamin K antagonists, such as warfarin-based anticoagulants.


Subject(s)
1-Carboxyglutamic Acid , Chromosomes, Human, Pair 11 , Membrane Proteins/genetics , X Chromosome , Adult , Amino Acid Sequence , Base Sequence , Chromosome Mapping , DNA, Complementary , Female , Fetus , Gene Expression , Humans , Membrane Proteins/metabolism , Molecular Sequence Data , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Tissue Distribution , Tumor Cells, Cultured
2.
Blood ; 96(3): 979-87, 2000 Aug 01.
Article in English | MEDLINE | ID: mdl-10910913

ABSTRACT

Factor VIII C domains contain key binding sites for von Willebrand factor (vWF) and phospholipid membranes. Hemophilic patients were screened for factor VIII C-domain mutations to provide a well-characterized series. Mutated residues were localized to the high-resolution C2 structure and to a homology model of C1. Of 30 families found with mutations in the C domains, there were 14 missense changes, and 9 of these were novel. Of the missense mutations, 10 were associated with reduced vWF binding and 8 were at residues with surface-exposed side chains. Six of the 10 mutants had nearly equivalent factor VIII clotting activity and antigen level, suggesting that reduced vWF binding could cause hemophilia by reducing factor VIII stability in circulation. When the present series was combined with previously described mutations from an online international database, 11 C1 and C2 mutations in patients with mild or moderately severe hemophilia A were associated with antibody-inhibitor development in at least one affected individual. Of these substitutions, 6 occurred at surface-exposed residues. As further details of the C1 structure and its interface with C2 become available, and as binding studies are performed on the plasma of more patients with hemophilic C-domain mutations, prediction of surface binding sites should improve, allowing confirmation by site-specific mutagenesis of surface-exposed residues.


Subject(s)
Factor VIII/chemistry , Factor VIII/genetics , Amino Acid Sequence , Humans , Models, Molecular , Molecular Sequence Data , Mutation, Missense , Protein Conformation , Sequence Alignment
3.
Nature ; 402(6760): 439-42, 1999 Nov 25.
Article in English | MEDLINE | ID: mdl-10586887

ABSTRACT

Human factor VIII is a plasma glycoprotein that has a critical role in blood coagulation. Factor VIII circulates as a complex with von Willebrand factor. After cleavage by thrombin, factor VIIIa associates with factor IXa at the surface of activated platelets or endothelial cells. This complex activates factor X (refs 6, 7), which in turn converts prothrombin to thrombin in the presence of factor Va (refs 8, 9). The carboxyl-terminal C2 domain of factor VIII contains sites that are essential for its binding to von Willebrand factor and to negatively charged phospholipid surfaces. Here we report the structure of human factor VIII C2 domain at 1.5 A resolution. The structure reveals a beta-sandwich core, from which two beta-turns and a loop display a group of solvent-exposed hydrophobic residues. Behind the hydrophobic surface lies a ring of positively charged residues. This motif suggests a mechanism for membrane binding involving both hydrophobic and electrostatic interactions. The structure explains, in part, mutations in the C2 region of factor VIII that lead to bleeding disorders in haemophilia A.


Subject(s)
Factor VIII/chemistry , Crystallography, X-Ray , Electrochemistry , Factor VIII/genetics , Hemophilia A/genetics , Humans , Models, Molecular , Point Mutation , Protein Conformation , Protein Structure, Tertiary
4.
Proc Natl Acad Sci U S A ; 96(20): 11189-93, 1999 Sep 28.
Article in English | MEDLINE | ID: mdl-10500152

ABSTRACT

The activation of human platelets by thrombin is mediated primarily by protease-activated receptors (PARs). PAR1 and PAR4 are present on human platelets and are activated by the hexapeptides SFLLRN and GYPGQV, respectively. To further characterize the involvement of PAR1 and PAR4 in platelet activation, the ability of SFLLRN or GYPGQV to generate annexin V binding to newly exposed phospholipids on the platelet surface and generate procoagulant activity has been examined. Exposure of phosphatidylserine and phosphatidylethanolamine on platelets, as determined by an increase in annexin V binding, was strongly stimulated by SFLLRN, thrombin, and collagen, but only to a minor extent by GYPGQV. In a clotting assay initiated with factor VIIa, soluble tissue factor, and calcium, the clotting time in the absence of platelets was >5 min. In the presence of unstimulated platelets, the clotting time was 200 +/- 20 sec. In the presence of platelets activated with SFLLRN or collagen, the clotting time decreased to 100 +/- 10 sec. This shortening of the clotting time is equivalent to about a 5-fold increase in coagulant activity when stimulated platelets are compared with unstimulated platelets and activated platelets are used as a reference. These results indicate that thrombin initiates a very strong response in platelets through PAR1, leading to exposure of anionic phospholipids that support blood clotting. The response mediated by PAR4, however, was limited to platelet aggregation and similar to that triggered in platelets by weaker agonists such as ADP or epinephrine.


Subject(s)
Blood Coagulation Factors/analysis , Blood Platelets/drug effects , Receptors, Thrombin/physiology , Thrombin/pharmacology , Annexin A5/metabolism , Blood Coagulation , Calcium/metabolism , Humans , Platelet Aggregation/drug effects , Receptor, PAR-1
5.
Biochem Biophys Res Commun ; 251(3): 914-9, 1998 Oct 29.
Article in English | MEDLINE | ID: mdl-9791010

ABSTRACT

Based on two partial cDNA sequences, a full-length cDNA sequence for an actin-binding like protein previously named ABPL has been isolated and characterized. ABPL is homologous to the human actin-binding proteins ABP-280 and ABP-278. The predicted sequence for ABPL is 2,705 amino acids in length with a calculated molecular mass of 289 kDa. It contains an amino terminal actin-binding domain followed by 24 tandem repeats of approximately 96 amino acids. Two hinge regions, Hinge I and Hinge II, were located prior to repeats 16 and 24, respectively. An isoform of ABPL lacking Hinge I, with a calculated molecular mass of 286 kDa, was also identified by the reverse transcriptase PCR (RT-PCR) method. A comparison with genomic sequences indicated the isoform resulted from alternative RNA splicing. ABPL has a unique insertion sequence of 82 amino acids in repeat 20 that was not present in the other two homologues and has a tissue distribution that was also different from the other two homologues.


Subject(s)
Contractile Proteins/genetics , Microfilament Proteins/genetics , Actins/metabolism , Alternative Splicing , Amino Acid Sequence , Cloning, Molecular , DNA, Complementary/genetics , Filamins , Humans , Molecular Sequence Data , Protein Binding , Protein Isoforms/genetics , Sequence Homology, Amino Acid
6.
Blood ; 92(4): 1268-76, 1998 Aug 15.
Article in English | MEDLINE | ID: mdl-9694715

ABSTRACT

Glycoprotein (GP)Ib-IX-V is one of the major transmembrane complexes present on the platelet surface. Its extracellular domain binds von Willebrand factor (vWF) and thrombin, while its intracellular domain associates tightly with the cytoskeleton through the actin-binding protein (ABP)-280, also known as filamin. In the present study, a full-length cDNA coding for a human ABP homologue has been cloned and sequenced. This protein was identified by the yeast two-hybrid screening procedure via its interaction with the intracellular domain of GPIbalpha. Initially, a 1.3-kb partial cDNA was isolated from a megakaryocyte-like cell line (K562) cDNA library followed by a full-length cDNA of 9.4 kb that was identified in a human placenta library. The full-length cDNA encoded a protein of 2,578 amino acids with a calculated molecular weight of 276 kD (ABP-276). The amino terminal 248 amino acids contained an apparent actin binding domain followed by 24 tandem repeats each containing about 96 amino acids. The amino acid sequence of the protein shared a high degree of homology with human endothelial ABP-280 (70% identity) and chicken filamin (83% identity). However, the 32 amino acid Hinge I region in ABP-280 that contains a calpain cleavage site conferring flexibility on the molecule, was absent in the homologue. An isoform containing a 24 amino acid insertion with a unique sequence at the missing Hinge I region was also identified (ABP-278). This isoform resulted from alternative RNA splicing. ABP-276 and/or ABP-278 were present in all tissues examined, but the relative amount varied in that some tissue contained both forms, while other tissue contained predominately one or the other.


Subject(s)
Contractile Proteins/isolation & purification , Microfilament Proteins/isolation & purification , Platelet Glycoprotein GPIb-IX Complex/metabolism , Amino Acid Sequence , Base Sequence , Contractile Proteins/chemistry , Contractile Proteins/genetics , Contractile Proteins/metabolism , DNA, Complementary/genetics , DNA, Neoplasm/genetics , Filamins , Humans , Leukemia, Erythroblastic, Acute/genetics , Microfilament Proteins/chemistry , Microfilament Proteins/genetics , Microfilament Proteins/metabolism , Molecular Sequence Data , Neoplasm Proteins/genetics , Neoplasm Proteins/isolation & purification , Neoplasm Proteins/metabolism , Organ Specificity , Protein Binding , RNA Splicing , Saccharomyces cerevisiae/genetics , Sequence Alignment , Sequence Homology, Amino Acid , Structure-Activity Relationship
7.
Proc Natl Acad Sci U S A ; 95(12): 6642-6, 1998 Jun 09.
Article in English | MEDLINE | ID: mdl-9618465

ABSTRACT

Protease-activated receptors 1-3 (PAR1, PAR2, and PAR3) are members of a unique G protein-coupled receptor family. They are characterized by a tethered peptide ligand at the extracellular amino terminus that is generated by minor proteolysis. A partial cDNA sequence of a fourth member of this family (PAR4) was identified in an expressed sequence tag database, and the full-length cDNA clone has been isolated from a lymphoma Daudi cell cDNA library. The ORF codes for a seven transmembrane domain protein of 385 amino acids with 33% amino acid sequence identity with PAR1, PAR2, and PAR3. A putative protease cleavage site (Arg-47/Gly-48) was identified within the extracellular amino terminus. COS cells transiently transfected with PAR4 resulted in the formation of intracellular inositol triphosphate when treated with either thrombin or trypsin. A PAR4 mutant in which the Arg-47 was replaced with Ala did not respond to thrombin or trypsin. A hexapeptide (GYPGQV) representing the newly exposed tethered ligand from the amino terminus of PAR4 after proteolysis by thrombin activated COS cells transfected with either wild-type or the mutant PAR4. Northern blot showed that PAR4 mRNA was expressed in a number of human tissues, with high levels being present in lung, pancreas, thyroid, testis, and small intestine. By fluorescence in situ hybridization, the human PAR4 gene was mapped to chromosome 19p12.


Subject(s)
Receptors, Cell Surface/genetics , Receptors, Thrombin/genetics , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Humans , Inositol 1,4,5-Trisphosphate/metabolism , Molecular Sequence Data , Mutation , Receptors, Thrombin/metabolism , Sequence Analysis , Transfection
9.
J Biol Chem ; 272(38): 23792-8, 1997 Sep 19.
Article in English | MEDLINE | ID: mdl-9295325

ABSTRACT

The carboxyl-terminal region of the gamma chain of fibrinogen is involved in calcium binding, fibrin polymerization, factor XIIIa-mediated cross-linking, and binding to the platelet fibrin(ogen) receptor. Protein fragments encoding amino acids Val143 to Val411 (rFbggammaC30) or Val143 to Leu427 (gamma'C30) from the carboxyl end of the gamma or gamma' chains, respectively, of human fibrinogen were expressed in yeast (Pichia pastoris) and characterized as to their cross-linking by factor XIIIa, polymerization pocket, and calcium-binding site. rFbggammaC30 and gamma'C30 were both readily cross-linked by factor XIIIa, but only rFbggammaC30 was capable of inhibiting thrombin-induced platelet aggregation. Two mutants, gammaC30-Q329R and gammaC30-D364A, which were based on the three-dimensional structure of the polymerization pocket within rFbggammaC30 and on information derived from naturally occurring mutant fibrinogens, were also expressed and characterized. rFbggammaC30 inhibited (desAA)fibrin polymerization in a dose-dependent manner, while the two mutant forms did not. Similarly, rFbggammaC30 and gamma'C30 were protected from plasmin degradation by the presence of Ca2+ or the peptide Gly-Pro-Arg-Pro, indicating that a functional Ca2+-binding site and polymerization pocket are contained within each of these fragments. The mutant fragments, however, were protected from plasmin only by metal ions, while no protective effect was conferred by GPRP or by any other peptide tested. These results indicate that the polymerization pocket "a", which binds the peptide GPRP, functions independently from the nearby calcium-binding site and that amino acids Gln329 and Asp364 play a crucial role in fibrin polymerization.


Subject(s)
Calcium/metabolism , Fibrinogen/chemistry , Amino Acid Sequence , Binding Sites , Biopolymers , Fibrinogen/metabolism , Fibrinolysin/metabolism , Humans , Hydrolysis , Male , Platelet Aggregation , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Thrombin/metabolism
10.
J Biol Chem ; 272(34): 21582-8, 1997 Aug 22.
Article in English | MEDLINE | ID: mdl-9261179

ABSTRACT

The precursor or zymogen form of prostate-specific antigen (pro-PSA) is composed of 244 amino acid residues including an amino-terminal propiece of 7 amino acids. Recombinant pro-PSA was expressed in Escherichia coli, isolated from inclusion bodies, refolded, and purified. The zymogen was readily activated by trypsin at a weight ratio of 50:1 to generate PSA, a serine protease that cleaves the chromogenic chymotrypsin substrate 3-carbomethoxypropionyl-L-arginyl-L-prolyl-L-tyrosine-p-nitroanili ne- HCl (S-2586). In this activation, the amino-terminal propiece Ala-Pro-Leu-Ile-Leu-Ser-Arg was released by cleavage at the Arg-Ile peptide bond. The recombinant pro-PSA was also activated by recombinant human glandular kallikrein, another prostate-specific serine protease, as well as by a partially purified protease(s) from seminal plasma. The recombinant PSA was inhibited by alpha1-antichymotrypsin, forming an equimolar complex with a molecular mass of approximately 100 kDa. The recombinant PSA failed to activate single chain urokinase-type plasminogen activator, in contrast to the recombinant hK2, which readily activated single chain urokinase-type plasminogen activator. These results indicate that pro-PSA is converted to an active serine protease by minor proteolysis analogous to the activation of many of the proteases present in blood, pancreas, and other tissues. Furthermore, PSA is probably generated by a cascade system involving a series of precursor proteins. These proteins may interact in a stepwise manner similar to the generation of plasmin during fibrinolysis or thrombin during blood coagulation.


Subject(s)
Kallikreins/metabolism , Prostate-Specific Antigen/metabolism , Trypsin/metabolism , Enzyme Activation , Enzyme Precursors/metabolism , Escherichia coli , Humans , Protein Folding , Recombinant Proteins , Semen/enzymology
11.
Proc Natl Acad Sci U S A ; 94(17): 9058-62, 1997 Aug 19.
Article in English | MEDLINE | ID: mdl-9256434

ABSTRACT

Two human cDNAs that encode novel vitamin K-dependent proteins have been cloned and sequenced. The predicted amino acid sequences suggest that both are single-pass transmembrane proteins with amino-terminal gamma-carboxyglutamic acid-containing domains preceded by the typical propeptide sequences required for posttranslational gamma-carboxylation of glutamic acid residues. The polypeptides, with deduced molecular masses of 23 and 17 kDa, are proline-rich within their putative cytoplasmic domains and contain several copies of the sequences PPXY and PXXP, motifs found in a variety of signaling and cytoskeletal proteins. Accordingly, these two proteins have been called proline-rich Gla proteins (PRGP1 and PRGP2). Unlike the gamma-carboxyglutamic acid domain-containing proteins of the blood coagulation cascade, the two PRGPs are expressed in a variety of extrahepatic tissues, with PRGP1 and PRGP2 most abundantly expressed in the spinal cord and thyroid, respectively, among those tissues tested. Thus, these observations suggest a novel physiological role for these two new members of the vitamin K-dependent family of proteins.


Subject(s)
1-Carboxyglutamic Acid , Peptides/genetics , Proline , Proteins/genetics , Vitamin K/metabolism , Amino Acid Sequence , Base Sequence , Cloning, Molecular , DNA, Complementary/genetics , Humans , Molecular Sequence Data , Peptides/metabolism , Proline-Rich Protein Domains , Proteins/metabolism , Sequence Alignment , Sequence Analysis
12.
Proc Natl Acad Sci U S A ; 94(14): 7176-81, 1997 Jul 08.
Article in English | MEDLINE | ID: mdl-9207064

ABSTRACT

After vascular injury, a cascade of serine protease activations leads to the conversion of the soluble fibrinogen molecule into fibrin. The fibrin monomers then polymerize spontaneously and noncovalently to form a fibrin gel. The primary interaction of this polymerization reaction is between the newly exposed N-terminal Gly-Pro-Arg sequence of the alpha chain of one fibrin molecule and the C-terminal region of a gamma chain of an adjacent fibrin(ogen) molecule. In this report, the polymerization pocket has been identified by determining the crystal structure of a 30-kDa C-terminal fragment of the fibrin(ogen) gamma chain complexed with the peptide Gly-Pro-Arg-Pro. This peptide mimics the N terminus of the alpha chain of fibrin. The conformational change in the protein upon binding the peptide is subtle, with electrostatic interactions primarily mediating the association. This is consistent with biophysical experiments carried out over the last 50 years on this fundamental polymerization reaction.


Subject(s)
Fibrin/chemistry , Oligopeptides/chemistry , Dimerization , Fibrin/metabolism , Models, Molecular , Molecular Sequence Data , Oligopeptides/metabolism , Protein Conformation
13.
Structure ; 5(1): 125-38, 1997 Jan 15.
Article in English | MEDLINE | ID: mdl-9016719

ABSTRACT

BACKGROUND: Blood coagulation occurs by a cascade of zymogen activation resulting from minor proteolysis. The final stage of coagulation involves thrombin generation and limited proteolysis of fibrinogen to give spontaneously polymerizing fibrin. The resulting fibrin network is covalently crosslinked by factor XIIIa to yield a stable blood clot. Fibrinogen is a 340 kDa glycoprotein composed of six polypeptide chains, (alphabetagamma)2, held together by 29 disulfide bonds. The globular C terminus of the gamma chain contains a fibrin-polymerization surface, the principal factor XIIIa crosslinking site, the platelet receptor recognition site, and a calcium-binding site. Structural information on this domain should thus prove helpful in understanding clot formation. RESULTS: The X-ray crystallographic structure of the 30 kDa globular C terminus of the gamma chain of human fibrinogen has been determined in one crystal form using multiple isomorphous replacement methods. The refined coordinates were used to solve the structure in two more crystal forms by molecular replacement; the crystal structures have been refined against diffraction data to either 2.5 A or 2.1 A resolution. Three domains were identified in the structure, including a C-terminal fibrin-polymerization domain (P), which contains a single calcium-binding site and a deep binding pocket that provides the polymerization surface. The overall structure has a pronounced dipole moment, and the C-terminal residues appear highly flexible. CONCLUSIONS: The polymerization domain in the gamma chain is the most variable among a family of fibrinogen-related proteins and contains many acidic residues. These residues contribute to the molecular dipole moment in the structure, which may allow electrostatic steering to guide the alignment of fibrin monomers during the polymerization process. The flexibility of the C-terminal residues, which contain one of the factor XIIIa crosslinking sites and the platelet receptor recognition site, may be important in the function of this domain.


Subject(s)
Fibrinogen/chemistry , Amino Acid Sequence , Binding Sites , Calcium/metabolism , Cross-Linking Reagents/metabolism , Crystallography, X-Ray , Humans , Models, Molecular , Molecular Sequence Data , Peptide Fragments/chemistry , Protein Conformation , Protein Structure, Tertiary , Recombinant Proteins/chemistry , Sequence Alignment , Transglutaminases/pharmacology
14.
J Biol Chem ; 271(44): 27942-7, 1996 Nov 01.
Article in English | MEDLINE | ID: mdl-8910396

ABSTRACT

The role of alphagamma and betagamma dimers as intermediates in the assembly of fibrinogen was examined in cell fusion experiments using stably transfected baby hamster kidney cell lines expressing one or combinations of fibrinogen chains. Fibrinogen was readily formed and secreted into the culture media when cells co-expressing beta and gamma chains and generating betagamma complexes were fused with cells expressing only the alpha chain. Likewise, when cells co-expressing alpha and gamma chains and generating alphagamma complexes were fused with cells expressing only the beta chain, fibrinogen was also formed and secreted. The relative amounts of alphagamma or betagamma intermediates observed during fibrinogen biosynthesis were determined by the levels of the component chains; i.e. when the beta chain was limiting, the alphagamma dimer was the predominant intermediate; likewise, when the alpha chain was limiting, the betagamma complex was the predominant intermediate. The incorporation of preformed alphagamma and betagamma complexes into secreted fibrinogen did not require concurrent protein synthesis, as shown by experiments employing cycloheximide. These data strongly support the role of alphagamma and betagamma complexes as functional intermediates in the assembly of fibrinogen.


Subject(s)
Fibrinogen/biosynthesis , Animals , Carcinoma, Hepatocellular , Cell Fusion , Cell Line , Cricetinae , Dimerization , Fibrinogen/chemistry , Fibrinogen/physiology , Humans , Kinetics , Liver Neoplasms , Macromolecular Substances , Polyethylene Glycols/pharmacology , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Transfection
15.
J Biol Chem ; 271(44): 27948-53, 1996 Nov 01.
Article in English | MEDLINE | ID: mdl-8910397

ABSTRACT

Fibrinogen is a plasma protein consisting of six polypeptide chains which are linked by disulfide bonds. During protein synthesis, assembly of the molecule proceeds through the formation of alphagamma and betagamma heterodimers followed by the generation of alphabetagamma half-molecules and dimerizing to generate the mature six-chain molecule. In the present study, sequences required for the formation of the alphagamma and betagamma heterodimers were examined in stably transfected baby hamster kidney cells expressing combinations of normal as well as modified polypeptide chains. Deletion of the amino terminus and the proximal first half of the coiled-coil region of the three fibrinogen chains had little or no effect on heterodimer and half-molecule formation. These deletions, however, did prevent half-molecules from forming the six-chain molecule. Deletion of the distal second half of the coiled-coil region of each chain completely prevented the assembly process. Point mutations in the second half of the coiled-coil region also indicated that hydrophilic residues that form ion pairs between interacting chains were not critical in the formation of the heterodimeric complexes. These results suggest that the initial formation of the alphagamma and betagamma complexes depends primarily on hydrophobic interactions of amino acids located in the second half of the coiled-coil region of the molecule. These interactions occur in the rough endoplasmic reticulum in the presence of various chaperones such as BiP.


Subject(s)
Fibrinogen/biosynthesis , Fibrinogen/chemistry , Protein Structure, Secondary , Amino Acid Sequence , Animals , Cell Line , Cricetinae , Dimerization , Humans , Macromolecular Substances , Molecular Sequence Data , Mutagenesis, Site-Directed , Point Mutation , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Transfection
16.
Proc Natl Acad Sci U S A ; 93(13): 6258-63, 1996 Jun 25.
Article in English | MEDLINE | ID: mdl-8692802

ABSTRACT

Tissue factor (TF) is the cellular receptor for coagulation factor VI/VIIa and is the membrane-bound glycoprotein that is generally viewed as the primary physiological initiator of blood coagulation. To define in greater detail the physiological role of TF in development and hemostasis, the TF gene was disrupted in mice. Mice heterozygous for the inactivated TF allele expressed approximately half the TF activity of wild-type mice but were phenotypically normal. However, homozygous TF-/- pups were never born in crosses between heterozygous mice. Analysis of mid-gestation embryos showed that TF-/- embryos die in utero between days 8.5 and 10.5. TF-/- embryos were morphologically distinct from their TF+/+ and TF+/- littermates after day 9.5 in that they were pale, edematous, and growth retarded. Histological studies showed that early organogenesis was normal. The initial failure in TF-/- embryos appeared to be hemorrhaging, leading to the leakage of embryonic red cells from both extraembryonic and embryonic vessels. These studies indicate that TF plays an indispensable role in establishing and/or maintaining vascular integrity in the developing embryo at a time when embryonic and extraembryonic vasculatures are fusing and blood circulation begins.


Subject(s)
Blood Coagulation Disorders/complications , Fetal Death/etiology , Hemorrhage , Thromboplastin/deficiency , Animals , Base Sequence , DNA Primers , Genes, Lethal , Heterozygote , Homozygote , Mice , Molecular Sequence Data , Phenotype , Thromboplastin/genetics
17.
J Biol Chem ; 271(16): 9587-94, 1996 Apr 19.
Article in English | MEDLINE | ID: mdl-8621633

ABSTRACT

The promoter for the gene coding for human protein C has been characterized as to nucleotide sequences that regulate the synthesis of mRNA. The major transcription start site was found 65 nucleotides upstream from the first intron/exon boundary along with two minor sites. Functional characterization of 1528 base pairs at the 5'-end of the gene was then carried out by chloramphenicol acetyltransferase reporter assays, protection from DNase I digestion, and electrophoretic mobility shift assays employing HepG2 and HeLa cells. One of the upstream regions (nucleotides -25 to +9) contained binding sites for at least two different transcription factors, including a hepatic nuclear factor 1-binding site (-10 to +9) and two overlapping and oppositely oriented hepatic nuclear factor 3-binding sites (-25 to -11). A second major region (PCE1) (+12 to +30) appeared to be a unique, liver-specific regulatory sequence. An Sp1-binding site in exon I (+58 to +65) was also recognized by cotransfection experiments with an Sp1 expression plasmid. Specific mutations in these promoter elements reduced transcriptional activity and abolished the binding of hepatic nuclear proteins. Finally, a strong silencer element (PCS1) (between -162 and -82) and two possible liver-specific enhancer regions (PCE2 and PCE3), which interact coordinately with the promoter elements, were also found (between -1462 and -162).


Subject(s)
Gene Expression Regulation , Protein C/genetics , Transcription, Genetic , Base Sequence , Binding Sites , Cell Line , Chloramphenicol O-Acetyltransferase/biosynthesis , DNA Footprinting , DNA Primers , DNA, Complementary , DNA-Binding Proteins/metabolism , Deoxyribonuclease I , Genomic Library , HeLa Cells , Humans , Luciferases/biosynthesis , Molecular Sequence Data , Mutagenesis , Polymerase Chain Reaction , Promoter Regions, Genetic , Protein C/biosynthesis , RNA, Messenger/biosynthesis , Recombinant Proteins/biosynthesis , Regulatory Sequences, Nucleic Acid , Tumor Cells, Cultured
18.
Proc Natl Acad Sci U S A ; 92(26): 12347-51, 1995 Dec 19.
Article in English | MEDLINE | ID: mdl-8618898

ABSTRACT

Promoter and silencer elements of the immediate 5' flanking region of the gene coding for human factor VII were identified and characterized. The major transcription start site, designated as +1, was determined by RACE (rapid amplification of cDNA ends) analysis of human liver cDNA and was found to be located 50 bp upstream from the translation start site. Two minor transcription start sites were found at bp +32 bp and +37. Progressive deletions of the 5' flanking region were fused to the chloramphenicol acetyltransferase reporter gene and transient expression in HepG2 and HeLa cells was measured. Two promoter elements that were essential for hepatocyte-specific transcription were identified. The first site, FVIIP1, located at bp -19 to +1, functioned independently of orientation or position and contributed about one-third of the promoter activity of the factor VII gene. Electrophoretic mobility-shift, competition, and anti-hepatocyte nuclear factor 4 (HNF4) antibody supershift experiments demonstrated that this site contained an HNF-4 binding element homologous to the promoters in the genes coding for factor IX and factor X. The second site, FVIIP2, located at bp -50 to -26, also functioned independent of orientation or position and contributed about two thirds of the promoter activity in the gene for factor VII. Functional assays with mutant sequences demonstrated that a 10-bp G + C-rich core sequence which shares 90% sequence identity with the prothrombin gene enhancer was essential for the function of the second site. Mobility-shift and competition assays suggested that this site also binds hepatic-specific factors as well as the transcription factor Sp1. Two silencer elements located upstream of the promoter region spanning bp -130 to -103 (FVIIS1 site) and bp -202 to -130 (FVIIS2) were also identified by reporter gene assays.


Subject(s)
Factor VII/biosynthesis , Factor VII/genetics , Gene Expression , Liver/metabolism , Regulatory Sequences, Nucleic Acid , Sequence Deletion , Antibodies , Base Sequence , Basic Helix-Loop-Helix Leucine Zipper Transcription Factors , Carcinoma, Hepatocellular/metabolism , Cell Line , Chloramphenicol O-Acetyltransferase/biosynthesis , Consensus Sequence , DNA Mutational Analysis , DNA, Complementary , DNA-Binding Proteins/metabolism , Hepatocyte Nuclear Factor 4 , Humans , Liver Neoplasms/metabolism , Molecular Sequence Data , Mutagenesis , Organ Specificity , Phosphoproteins/immunology , Phosphoproteins/metabolism , Point Mutation , Polymerase Chain Reaction , Recombinant Proteins/biosynthesis , Sequence Homology, Nucleic Acid , Transcription Factors/immunology , Transcription Factors/metabolism , Transcription, Genetic
19.
J Biol Chem ; 270(47): 28342-9, 1995 Nov 24.
Article in English | MEDLINE | ID: mdl-7499335

ABSTRACT

The 5'-flanking region of the gene coding for the alpha chain of human fibrinogen was isolated, sequenced, and characterized. The principal site of transcription initiation was determined by primer extension analysis and the RNase protection assay and shown to be at an adenine residue located 55 nucleotides upstream from the initiator methionine codon, or 13,399 nucleotides down-stream from the polyadenylation site of the gene coding for the gamma chain. Transient expression of constructs containing sequentially deleted 5'-flanking sequences of the alpha chain gene fused to the chloramphenicol acetyltransferase reporter gene showed that the promoter was liver-specific and inducible by interleukin 6 (IL-6). The shortest DNA fragment with significant promoter activity and full response to IL-6 stimulation encompassed the region from -217 to +1 base pairs (bp). Although six potential IL-6 responsive sequences homologous to the type II IL-6 responsive element were present, a single sequence of CTGGGA localized from -122 to -127 bp was shown to be a functional element in IL-6 induction. A hepatocyte nuclear factor 1 (HNF-1) binding site, present from -47 to -59 bp, in combination with other upstream elements, was essential for liver-specific expression of the gene. A functional CCAAT/enhancer binding protein site (C/EBP, -134 to -142 bp) was also identified within 217 bp from the transcription initiation site. An additional positive element (-1393 to -1133 bp) and a negative element (-1133 to -749 bp) were also found in the upstream region of the alpha-fibrinogen gene.


Subject(s)
Fibrinogen/genetics , Nuclear Proteins , Promoter Regions, Genetic , Amino Acid Sequence , Animals , Base Sequence , Binding Sites , Cell Nucleus/metabolism , Consensus Sequence , DNA/genetics , DNA/metabolism , DNA Primers , DNA-Binding Proteins/metabolism , Fibrinogen/biosynthesis , Gene Expression/drug effects , Genetic Linkage , Hepatocyte Nuclear Factor 1 , Hepatocyte Nuclear Factor 1-alpha , Hepatocyte Nuclear Factor 1-beta , Humans , Interleukin-6/pharmacology , Liver/drug effects , Liver/metabolism , Luciferases/biosynthesis , Macromolecular Substances , Molecular Sequence Data , Mutagenesis, Site-Directed , Oligonucleotide Probes , Polymerase Chain Reaction , Promoter Regions, Genetic/drug effects , Rats , Recombinant Proteins/biosynthesis , Regulatory Sequences, Nucleic Acid , Restriction Mapping , Sequence Homology, Nucleic Acid , TATA Box , Transcription Factors/metabolism
20.
J Biol Chem ; 270(47): 28350-6, 1995 Nov 24.
Article in English | MEDLINE | ID: mdl-7499336

ABSTRACT

The 5'-flanking region of the gene coding for the gamma chain of human fibrinogen was characterized for its promoter activity. Reporter gene studies using chloramphenicol acetyltransferase as the indicator along with mutations in the DNA showed that a TATA-like sequence (-20 to -23 base pairs (bp)), a CAAT-like sequence (-54 to -57 bp), and an upstream stimulatory factor (USF) binding site (-66 to -77 bp) constitute a minimal promoter that mediates liver-specific expression of the gene. Electrophoretic gel mobility assays and antibody binding studies confirmed the interaction of USF with the binding site. An IL-6 responsive element with a sequence of CTGGAA located at -301 to -306 bp was shown to be a functional element in the IL-6 response. In contrast to the IL-6 responsive elements in the human alpha- and beta-fibrinogen genes, the element in the gene for the gamma chain of human fibrinogen was unaffected by the presence or elevated levels of the beta or delta isoforms of the CCAAT/enhancer binding proteins. A negative element with sequence homology to several silencer elements was also identified in the region of -348 to -390 bp of the gene for the gamma chain of human fibrinogen. A comparison of the regulatory elements in the genes coding for all three chains in fibrinogen is also presented.


Subject(s)
Fibrinogen/genetics , Promoter Regions, Genetic , Amino Acid Sequence , Animals , Base Sequence , Binding Sites , CHO Cells , Carcinoma, Hepatocellular , Cell Line , Chloramphenicol O-Acetyltransferase/biosynthesis , Cricetinae , DNA-Binding Proteins/metabolism , Fibrinogen/biosynthesis , Gene Expression/drug effects , Humans , Interleukin-6/pharmacology , Liver Neoplasms , Macromolecular Substances , Molecular Sequence Data , Recombinant Proteins/biosynthesis , Regulatory Sequences, Nucleic Acid , Sequence Deletion , TATA Box , Transfection , Tumor Cells, Cultured
SELECTION OF CITATIONS
SEARCH DETAIL
...