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1.
Eur Biophys J ; 34(5): 469-76, 2005 Jul.
Article in English | MEDLINE | ID: mdl-15981001

ABSTRACT

Self-association of protein monomers to higher-order oligomers plays an important role in a plethora of biological phenomena. The classical biophysical technique of analytical ultracentrifugation is a key method used to measure protein oligomerisation. Recent advances in sedimentation data analysis have enabled the effects of diffusion to be deconvoluted from sample heterogeneity, permitting the direct identification of oligomeric species in self-associating systems. Two such systems are described and reviewed in this study. First, we examine the enzyme dihydrodipicolinate synthase (DHDPS), which crystallises as a tetramer. Wild-type DHDPS plays a critical role in lysine biosynthesis in microbes and is therefore an important antibiotic target. To confirm the state of association of DHDPS in solution, we employed sedimentation velocity and sedimentation equilibrium studies in an analytical ultracentrifuge to show that DHDPS exists in a slow dimer-tetramer equilibrium with a dissociation constant of 76 nM. Second, we review works describing the hexamerisation of GDP-mannose pyrophosphorylase (GDP-MP), an enzyme that plays a critical role in mannose metabolism in Leishmania species. Although the structure of the GDP-MP hexamer has not yet been determined, we describe a three-dimensional model of the hexamer based largely on homology with the uridyltransferase enzyme, Glmu. GDP-MP is a novel drug target for the treatment of leishmaniasis, a devastating parasitic disease that infects more than 12 million people worldwide. Given that both GDP-MP and DHDPS are only active in their oligomeric states, we propose that inhibition of the self-association of critical enzymes in disease is an emerging paradigm for therapeutic intervention.


Subject(s)
Biophysics/methods , Enzymes/chemistry , Leishmania/enzymology , Animals , Computational Biology/methods , Dimerization , Escherichia coli/enzymology , Guanosine Diphosphate/chemistry , Hydro-Lyases/chemistry , Lysine/chemistry , Models, Molecular , Nucleotidyltransferases/chemistry , Protein Binding , Protein Conformation , Protein Structure, Quaternary , Protein Structure, Tertiary , Pseudomonas aeruginosa/enzymology , Software , Streptococcus pneumoniae/enzymology , Ultracentrifugation
2.
Curr Microbiol ; 50(6): 285-91, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15968507

ABSTRACT

The nucleotide sequence of the Brachyspira hyodysenteriae ftnA gene, encoding a putative ferritin protein (FtnA), was determined. Analysis of the sequence predicted that this gene encoded a protein of 180 amino acids. RT-PCR and Western blot showed that the ftnA gene was expressed in B. hyodysenteriae, and evidence suggests that FtnA stores iron rather than haem. ftnA was delivered as DNA and recombinant protein vaccines in a mouse model of B. hyodysenteriae infection. Vaccine efficacy was monitored by caecal pathology and quantification of B. hyodysenteriae numbers in the caeca of infected mice by real-time PCR.


Subject(s)
Bacterial Vaccines/administration & dosage , Ferritins/genetics , Reverse Transcriptase Polymerase Chain Reaction/methods , Spirochaetales Infections/prevention & control , Spirochaetales/immunology , Vaccines, DNA/administration & dosage , Amino Acid Sequence , Animals , Antibodies, Bacterial/blood , Bacterial Proteins/administration & dosage , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Cecum/microbiology , Cecum/pathology , Female , Ferritins/administration & dosage , Ferritins/chemistry , Ferritins/metabolism , Mice , Mice, Inbred C3H , Molecular Sequence Data , Polymerase Chain Reaction , Sequence Analysis, DNA , Spirochaetales/genetics , Spirochaetales/metabolism , Spirochaetales Infections/microbiology , Spirochaetales Infections/pathology , Vaccination
3.
Curr Opin Investig Drugs ; 6(2): 163-9, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15751739

ABSTRACT

Leishmania are protozoan parasites responsible for a spectrum of diseases collectively known as leishmaniasis. The disease is a significant health problem in many regions of the world and emerges as a serious co-infection in HIV-positive individuals. Current treatment of the disease is based on a limited number of chemotherapeutic agents which are rapidly becoming ineffective, and are characterized by high toxicity and cost. This review focuses on recent advances in antileishmanial drug development and improvements to current treatment options. Novel approaches currently used to identify leishmanicidal compounds as diverse as antimicrobial peptides and natural plant extracts are described in this review.


Subject(s)
Antiprotozoal Agents/pharmacology , Leishmaniasis/drug therapy , Animals , Anti-Bacterial Agents/therapeutic use , Biological Factors , Humans , Leishmaniasis/parasitology , Phytotherapy
4.
Trends Parasitol ; 20(2): 73-6, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14747020

ABSTRACT

To date, there are no vaccines against any of the major parasitic diseases, and chemotherapy is the main weapon in our arsenal. There is an urgent need for better drugs against Leishmania. With the completion of the human genome sequence and soon that of Leishmania, for the first time we have the opportunity to identify novel chemotherapeutic treatments. This requires the exploitation of a variety of technologies. The major challenge is to take the process from discovery of drug candidates all the way along the arduous path to the marketplace. A crucial component will be the forging of partnerships between the pharmaceutical industry and publicly funded scientists to ensure that the promise of the current revolution in biology lives up to our hopes and expectations.


Subject(s)
Antiprotozoal Agents/therapeutic use , Leishmania/immunology , Leishmaniasis/drug therapy , Animals , Humans , Leishmania/genetics , Leishmaniasis/prevention & control , Marketing , Protozoan Vaccines/therapeutic use , Research
5.
J Biol Chem ; 279(13): 12462-8, 2004 Mar 26.
Article in English | MEDLINE | ID: mdl-14718535

ABSTRACT

Leishmania parasites synthesize a range of mannose-containing glycoconjugates thought to be essential for virulence in the mammalian host and sandfly vector. A prerequisite for the synthesis of these molecules is the availability of the activated mannose donor, GDP-Man, the product of the catalysis of mannose-1-phosphate and GTP by GDP-mannose pyrophosphorylase (GDP-MP). In contrast to the lethal phenotype in fungi, the deletion of the gene in Leishmania mexicana did not affect parasite viability but led to a total loss of virulence, making GDP-MP an ideal target for anti-Leishmania drug development. We show by immunofluorescence and subcellular fractionation that GDP-MP is a cytoplasmic protein, and we describe a colorimetric activity assay suitable for the high throughput screening of small molecule inhibitors. We expressed recombinant GDP-MP as a fusion with maltose-binding protein and separated the enzyme from maltose-binding protein by thrombin cleavage, ion-exchange, and size exclusion chromatography. Size exclusion chromatography and analytical ultracentrifugation studies demonstrate that GDP-MP self-associates to form an enzymatically active and stable hexamer. However, sedimentation studies show that the GDP-MP hexamer dissociates to trimers and monomers in a time-dependent manner, at low protein concentrations, at low ionic strength, and at alkaline pH. Circular dichroism spectroscopy reveals that GDP-MP is comprised of mixed alpha/beta structure, similar to its closest related homologue, N-acetyl-glucoseamine-1-phosphate uridyltransferase (Glmu) from Streptococcus pneumoniae. Our studies provide insight into the structure of a novel target for the development of anti-Leishmania drugs.


Subject(s)
Leishmania mexicana/metabolism , Nucleotidyltransferases/chemistry , Animals , Antiprotozoal Agents/pharmacology , Blotting, Western , Carrier Proteins/metabolism , Catalysis , Chromatography, Ion Exchange , Circular Dichroism , Cytoplasm/metabolism , Detergents/pharmacology , Gene Deletion , Hydrogen-Ion Concentration , Maltose-Binding Proteins , Microscopy, Fluorescence , Models, Chemical , Octoxynol , Phenotype , Polyethylene Glycols/pharmacology , Precipitin Tests , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Streptococcus pneumoniae/metabolism , Subcellular Fractions , Time Factors , Water/chemistry
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