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J Med Chem ; 58(18): 7349-7369, 2015 Sep 24.
Article in English | MEDLINE | ID: mdl-26299766

ABSTRACT

Mycobacterium tuberculosis (Mtb), responsible for both latent and symptomatic tuberculosis (TB), remains the second leading cause of mortality among infectious diseases worldwide. Mycobacterial biotin protein ligase (MtBPL) is an essential enzyme in Mtb and regulates lipid metabolism through the post-translational biotinylation of acyl coenzyme A carboxylases. We report the synthesis and evaluation of a systematic series of potent nucleoside-based inhibitors of MtBPL that contain modifications to the ribofuranosyl ring of the nucleoside. All compounds were characterized by isothermal titration calorimetry (ITC) and shown to bind potently with K(D)s ≤ 2 nM. Additionally, we obtained high-resolution cocrystal structures for a majority of the compounds. Despite fairly uniform biochemical potency, the whole-cell Mtb activity varied greatly with minimum inhibitory concentrations (MIC) ranging from 0.78 to >100 µM. Cellular accumulation studies showed a nearly 10-fold enhancement in accumulation of a C-2'-α analogue over the corresponding C-2'-ß analogue, consistent with their differential whole-cell activity.


Subject(s)
Antitubercular Agents/chemistry , Bacterial Proteins/antagonists & inhibitors , Carbon-Nitrogen Ligases/antagonists & inhibitors , Mycobacterium tuberculosis/enzymology , Nucleosides/chemistry , Antitubercular Agents/chemical synthesis , Antitubercular Agents/pharmacology , Bacterial Proteins/metabolism , Biotinylation , Carbon-Nitrogen Ligases/metabolism , Crystallography, X-Ray , Microbial Sensitivity Tests , Models, Molecular , Mycobacterium tuberculosis/drug effects , Nucleosides/chemical synthesis , Nucleosides/pharmacology , Protein Conformation , Stereoisomerism , Structure-Activity Relationship , Thermodynamics
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