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Nucleic Acids Res ; 52(D1): D255-D264, 2024 Jan 05.
Article in English | MEDLINE | ID: mdl-37971353

ABSTRACT

RegulonDB is a database that contains the most comprehensive corpus of knowledge of the regulation of transcription initiation of Escherichia coli K-12, including data from both classical molecular biology and high-throughput methodologies. Here, we describe biological advances since our last NAR paper of 2019. We explain the changes to satisfy FAIR requirements. We also present a full reconstruction of the RegulonDB computational infrastructure, which has significantly improved data storage, retrieval and accessibility and thus supports a more intuitive and user-friendly experience. The integration of graphical tools provides clear visual representations of genetic regulation data, facilitating data interpretation and knowledge integration. RegulonDB version 12.0 can be accessed at https://regulondb.ccg.unam.mx.


Subject(s)
Databases, Genetic , Escherichia coli K12 , Gene Expression Regulation, Bacterial , Computational Biology/methods , Escherichia coli K12/genetics , Internet , Transcription, Genetic
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