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1.
Cureus ; 16(2): e54532, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38516470

ABSTRACT

Gastrointestinal stromal tumors (GISTs) represent a rare form of gastrointestinal neoplasm. This report details a medical case involving a 44-year-old woman who underwent bilateral pheochromocytoma resection, GIST gastrectomy, and laparoscopic adrenalectomy with intestinal resection. Despite an initially positive response to oral imatinib, treatment was delayed due to economic constraints. This delay resulted in a critical event marked by abdominal GIST metastasis to the abdominal wall, subsequent rupture leading to hemoperitoneum, and emergency surgery. Following an adequate postsurgical recovery, she was successfully discharged prior to medication adjustments.

2.
Glycobiology ; 34(3)2024 Apr 01.
Article in English | MEDLINE | ID: mdl-38227775

ABSTRACT

CD14 is an innate immune receptor that senses pathogen-associated molecular patterns, such as lipopolysaccharide, to activate the innate immune response. Although CD14 is known to be glycosylated, detailed understanding about the structural and functional significance of this modification is still missing. Herein, an NMR and MS-based study, assisted by MD simulations, has provided a 3D-structural model of glycosylated CD14. Our results reveal the existence of a key N-glycosylation site at Asn282 that exclusively contains unprocessed oligomannnose N-glycans that perfectly fit the concave cavity of the bent-solenoid shaped protein. This site is not accessible to glycosidases and is fundamental for protein folding and secretion. A second N-site at Asn151 displays mostly complex N-glycans, with the typical terminal epitopes of the host cell-line expression system (i.e. ßGal, α2,3 and α2,6 sialylated ßGal, here), but also particularities, such as the lack of core fucosylation. The glycan at this site points outside the protein surface, resulting in N-glycoforms fully exposed and available for interactions with lectins. In fact, NMR experiments show that galectin-4, proposed as a binder of CD14 on monocytes to induce their differentiation into macrophages-like cells, interacts in vitro with CD14 through the recognition of the terminal glycoepitopes on Asn151. This work provides key information about CD14 glycosylation, which helps to better understand its functional roles and significance. Although protein glycosylation is known to be dynamic and influenced by many factors, some of the features found herein (presence of unprocessed N-glycans and lack of core Fuc) are likely to be protein specific.


Subject(s)
Lectins , Polysaccharides , Glycosylation , Polysaccharides/chemistry , Lectins/metabolism , Cell Line , Lipopolysaccharides/metabolism
3.
J Trop Med ; 2023: 1576481, 2023.
Article in English | MEDLINE | ID: mdl-37810169

ABSTRACT

The isolation of nucleic acids is a critical and limiting step for molecular assays, which prompted the arrival in Colombia of automated purification instruments during the SARS-CoV-2 pandemic. The local application of this technology in the study of tropical diseases, such as dengue and zika, is beginning to be tested. We evaluated the efficiency of the automated extraction of viral RNA for studies of pediatric dengue and zika. Clinical samples of children with dengue that were well characterized through RNA isolation by silica columns and serotype-specific nested RT-PCR (DENV-1 n = 7, DENV-2 n = 5, and negatives n = 8) in addition to 40 pediatric plasma samples spiked with ZIKV (strain PRVA BC59) and 209 from negative pre-epidemic children were analyzed. RNA from patients was extracted by two automated standard and high-throughput protocols on the KingFisher™ Flex instrument. The isolated RNA was evaluated for concentration and purity by spectrophotometry, for structural and functional integrity by electrophoresis and expression of the RNase P gene, and usefulness in serotype-specific DENV detection by conventional and real-time RT-PCR. For the evaluation of ZIKV RNA, the commercial TaqMan Triplex® assay was used, along with a well-tested in-house RT-qPCR assay. The concentration of RNA (5.2 vs. 7.5 ng/µL, P=0.03) and the number of integral bands (9 vs. 11) were higher with the high-throughput protocol. However, the number of specimens serotyped for DENV by RT-qPCR was comparable for both protocols. The cycle thresholds of the TaqMan Triplex® commercial kit and the in-house assay for the detection of plasma ZIKV RNA isolated with the standard protocol showed a strong association (r = 0.93, P < 0.0001) and a Cohen Kappa index of 0.98 when all 249 samples were analyzed. These preliminary results suggest that automated instruments could be used in studies of cocirculating flaviviruses that have represented a public health problem in recent decades in Colombia. They boast advantages such as efficiency, precision, time savings, and lower risk of cross-contamination.

4.
ACS Omega ; 8(19): 16883-16895, 2023 May 16.
Article in English | MEDLINE | ID: mdl-37214724

ABSTRACT

Lectin-glycan interactions are at the heart of a multitude of biological events. Glycans are usually presented in a multivalent manner on the cell surface as part of the so-called glycocalyx, where they interact with other entities. This multivalent presentation allows us to overcome the typical low affinities found for individual glycan-lectin interactions. Indeed, the presentation of glycans may drastically impact their binding by lectins, highly affecting the corresponding binding affinity and even selectivity. In this context, we herein present the study of the interaction of a variety of homo- and heteromultivalent lactose-functionalized glycomacromolecules and their lipid conjugates with two human galectins. We have employed as ligands the glycomacromolecules, as well as liposomes decorated with those structures, to evaluate their interactions in a cell-mimicking environment. Key details of the interaction have been unravelled by NMR experiments, both from the ligand and receptor perspectives, complemented by cryo-electron microscopy methods and molecular dynamics simulations.

5.
JACS Au ; 3(1): 204-215, 2023 Jan 23.
Article in English | MEDLINE | ID: mdl-36711084

ABSTRACT

Human sialic acid binding immunoglobulin-like lectin-8 (Siglec-8) is an inhibitory receptor that triggers eosinophil apoptosis and can inhibit mast cell degranulation when engaged by specific monoclonal antibodies (mAbs) or sialylated ligands. Thus, Siglec-8 has emerged as a critical negative regulator of inflammatory responses in diverse diseases, such as allergic airway inflammation. Herein, we have deciphered the molecular recognition features of the interaction of Siglec-8 with the mAb lirentelimab (2C4, under clinical development) and with a sialoside mimetic with the potential to suppress mast cell degranulation. The three-dimensional structure of Siglec-8 and the fragment antigen binding (Fab) portion of the anti-Siglec-8 mAb 2C4, solved by X-ray crystallography, reveal that 2C4 binds close to the carbohydrate recognition domain (V-type Ig domain) on Siglec-8. We have also deduced the binding mode of a high-affinity analogue of its sialic acid ligand (9-N-napthylsufonimide-Neu5Ac, NSANeuAc) using a combination of NMR spectroscopy and X-ray crystallography. Our results show that the sialoside ring of NSANeuAc binds to the canonical sialyl binding pocket of the Siglec receptor family and that the high affinity arises from the accommodation of the NSA aromatic group in a nearby hydrophobic patch formed by the N-terminal tail and the unique G-G' loop. The results reveal the basis for the observed high affinity of this ligand and provide clues for the rational design of the next generation of Siglec-8 inhibitors. Additionally, the specific interactions between Siglec-8 and the N-linked glycans present on the high-affinity receptor FcεRIα have also been explored by NMR.

6.
Chemistry ; 29(5): e202202208, 2023 Jan 24.
Article in English | MEDLINE | ID: mdl-36343278

ABSTRACT

Fluorine (19 F) incorporation into glycan-binding proteins (lectins) has been achieved and exploited to monitor the binding to carbohydrate ligands by nuclear magnetic resonance (NMR) spectroscopy. Galectins are a family of lectins that bind carbohydrates, generally with weak affinities, through a combination of intermolecular interactions including a key CH-π stacking involving a conserved tryptophan residue. Herein, Galectin-3 (Gal3) and Galectin-8 (Gal8) with one and two carbohydrate recognition domains (CRDs), respectively, were selected. Gal3 contains one Trp, whereas Gal8 contains three, one at each binding site and a third one not involved in sugar binding; these were substituted by the corresponding F-Trp analogues. The presence of fluorine did not significantly modify the affinity for glycan binding, which was in slow exchange on the 19 F NMR chemical-shift timescale, even for weak ligands, and allowed binding events taking place at two different binding sites within the same lectin to be individualized.


Subject(s)
Fluorine , Galectins , Galectins/metabolism , Carbohydrates , Polysaccharides/chemistry , Binding Sites , Magnetic Resonance Spectroscopy , Galectin 3/metabolism
7.
Pharmaceuticals (Basel) ; 15(2)2022 Jan 26.
Article in English | MEDLINE | ID: mdl-35215258

ABSTRACT

Galectins are a family of glycan binding proteins that stand out for the wide range of biological phenomena in which they are involved. Most galectin functions are associated with their glycan binding capacities, which are generally well characterized at the oligosaccharide level, but not at the glycoprotein or glycolipid level. Glycolipids form the part of cell membranes where they can act as galectin cellular receptors. In this scenario, glycan presentation as well as the membrane chemical and structural features are expected to have a strong impact in these molecular association processes. Herein, liposomes were used as membrane mimicking scaffolds for the presentation of glycosphingolipids (GSLs) and to investigate their interaction with Galectin-3 and the N-domain of Galectin-8 (Gal8N). The binding towards GM3 and GM1 and their non-silaylated GSLs was compared to the binding to the free glycans, devoid of lipid. The analysis was carried out using a combination of NMR methods, membrane perturbation studies, and molecular modeling. Our results showed a different tendency of the two galectins in their binding capacities towards the glycans, depending on whether they were free oligosaccharides or as part of GSL inserted into a lipid bilayer, highlighting the significance of GSL glycan presentation on membranes in lectin binding.

8.
Int J Hyg Environ Health ; 238: 113833, 2021 09.
Article in English | MEDLINE | ID: mdl-34461424

ABSTRACT

The coronavirus disease 2019 (COVID-19) is still spreading fast in several tropical countries after more than one year of pandemic. In this scenario, the effects of weather conditions that can influence the spread of the virus are not clearly understood. This study aimed to analyse the influence of meteorological (temperature, wind speed, humidity and specific enthalpy) and human mobility variables in six cities (Barranquilla, Bogota, Cali, Cartagena, Leticia and Medellin) from different biomes in Colombia on the coronavirus dissemination from March 25, 2020, to January 15, 2021. Rank correlation tests and a neural network named self-organising map (SOM) were used to investigate similarities in the dynamics of the disease in the cities and check possible relationships among the variables. Two periods were analysed (quarantine and post-quarantine) for all cities together and individually. The data were classified in seven groups based on city, date and biome using SOM. The virus transmission was most affected by mobility variables, especially in the post-quarantine. The meteorological variables presented different behaviours on the virus transmission in different biogeographical regions. The wind speed was one of the factors connected with the highest contamination rate recorded in Leticia. The highest new daily cases were recorded in Bogota where cold/dry conditions (average temperature <14 °C and absolute humidity >9 g/m3) favoured the contagions. In contrast, Barranquilla, Cartagena and Leticia presented an opposite trend, especially with the absolute humidity >22 g/m3. The results support the implementation of better local control measures based on the particularities of tropical regions.


Subject(s)
COVID-19 , SARS-CoV-2 , Colombia/epidemiology , Humans , Neural Networks, Computer , Pandemics , Weather
9.
Int J Mol Sci ; 22(11)2021 Jun 01.
Article in English | MEDLINE | ID: mdl-34206141

ABSTRACT

The interaction of multi-LacNAc (Galß1-4GlcNAc)-containing N-(2-hydroxypropyl) methacrylamide (HPMA) copolymers with human galectin-1 (Gal-1) and the carbohydrate recognition domain (CRD) of human galectin-3 (Gal-3) was analyzed using NMR methods in addition to cryo-electron-microscopy and dynamic light scattering (DLS) experiments. The interaction with individual LacNAc-containing components of the polymer was studied for comparison purposes. For Gal-3 CRD, the NMR data suggest a canonical interaction of the individual small-molecule bi- and trivalent ligands with the lectin binding site and better affinity for the trivalent arrangement due to statistical effects. For the glycopolymers, the interaction was stronger, although no evidence for forming a large supramolecule was obtained. In contrast, for Gal-1, the results indicate the formation of large cross-linked supramolecules in the presence of multivalent LacNAc entities for both the individual building blocks and the polymers. Interestingly, the bivalent and trivalent presentation of LacNAc in the polymer did not produce such an increase, indicating that the multivalency provided by the polymer is sufficient for triggering an efficient binding between the glycopolymer and Gal-1. This hypothesis was further demonstrated by electron microscopy and DLS methods.


Subject(s)
Blood Proteins/chemistry , Galectin 1/chemistry , Galectins/chemistry , Methacrylates/chemistry , Polymers/chemistry , Acrylamides/chemistry , Acrylamides/pharmacology , Binding Sites/drug effects , Blood Proteins/genetics , Carbohydrates/chemistry , Cryoelectron Microscopy , Galectin 1/genetics , Galectins/genetics , Humans , Ligands , Methacrylates/pharmacology , Polymers/pharmacology , Protein Binding/drug effects
10.
Commun Biol ; 4(1): 684, 2021 06 03.
Article in English | MEDLINE | ID: mdl-34083757

ABSTRACT

Glutamate dehydrogenases (GDHs) are widespread metabolic enzymes that play key roles in nitrogen homeostasis. Large glutamate dehydrogenases composed of 180 kDa subunits (L-GDHs180) contain long N- and C-terminal segments flanking the catalytic core. Despite the relevance of L-GDHs180 in bacterial physiology, the lack of structural data for these enzymes has limited the progress of functional studies. Here we show that the mycobacterial L-GDH180 (mL-GDH180) adopts a quaternary structure that is radically different from that of related low molecular weight enzymes. Intersubunit contacts in mL-GDH180 involve a C-terminal domain that we propose as a new fold and a flexible N-terminal segment comprising ACT-like and PAS-type domains that could act as metabolic sensors for allosteric regulation. These findings uncover unique aspects of the structure-function relationship in the subfamily of L-GDHs.


Subject(s)
Bacterial Proteins/chemistry , Glutamate Dehydrogenase/chemistry , Mycobacterium smegmatis/enzymology , Recombinant Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Catalytic Domain , Cryoelectron Microscopy , Crystallography, X-Ray , Glutamate Dehydrogenase/metabolism , Glutamate Dehydrogenase/ultrastructure , Kinetics , Models, Molecular , Mycobacterium smegmatis/genetics , Protein Binding , Protein Domains , Protein Multimerization , Recombinant Proteins/metabolism , Recombinant Proteins/ultrastructure
11.
RSC Chem Biol ; 2(3): 932-941, 2021 Apr 12.
Article in English | MEDLINE | ID: mdl-34179785

ABSTRACT

The interaction of human galectin-8 and its two separate N-terminal and C-terminal carbohydrate recognition domains (CRD) to their natural ligands has been analysed using a synergistic combination of experimental NMR and ITC methods, and molecular dynamics simulations. Both domains bind the minimal epitopes N-acetyllactosamine (1) and Galß1-3GalNAc (2) in a similar manner. However, the N-terminal and C-terminal domains show exquisite and opposing specificity to bind either Neu5Ac- or Fuc-containing ligands, respectively. Moreover, the addition of the high-affinity ligands specific for one of the CRDs does not make any effect on the binding at the alternative one. Thus, the two CRDs behave independently and may simultaneously target different molecular entities to promote clustering through the generation of supramolecular assemblies.

12.
Angew Chem Int Ed Engl ; 60(35): 19287-19296, 2021 08 23.
Article in English | MEDLINE | ID: mdl-34124805

ABSTRACT

The importance of multivalency for N-glycan-protein interactions has primarily been studied by attachment of minimal epitopes to artificial multivalent scaffold and not in the context of multi-antennary glycans. N-glycans can be modified by bisecting GlcNAc, core xylosides and fucosides, and extended N-acetyl lactosamine moieties. The impact of such modifications on glycan recognition are also not well understood. We describe here a chemoenzymatic methodology that can provide N-glycans expressed by the parasitic worm S. mansoni having unique epitopes at each antenna and containing core xyloside. NMR, computational and electron microscopy were employed to investigate recognition of the glycans by the human lectin DC-SIGN. It revealed that core xyloside does not influence terminal epitope recognition. The multi-antennary glycans bound with higher affinity to DC-SIGN compared to mono-valent counterparts, which was attributed to proximity-induced effective concentration. The multi-antennary glycans cross-linked DC-SIGN into a dense network, which likely is relevant for antigen uptake and intracellular routing.


Subject(s)
Epitopes/chemistry , Lectins/analysis , Polysaccharides/chemistry , Schistosoma mansoni/chemistry , Animals , Humans , Polysaccharides/chemical synthesis
13.
Angew Chem Int Ed Engl ; 60(34): 18777-18782, 2021 08 16.
Article in English | MEDLINE | ID: mdl-34128568

ABSTRACT

A combined chemo-enzymatic synthesis/NMR-based methodology is presented to identify, in unambiguous manner, the distinctive binding epitope within repeating sugar oligomers when binding to protein receptors. The concept is based on the incorporation of 13 C-labels at specific monosaccharide units, selected within a repeating glycan oligomeric structure. No new chemical tags are added, and thus the chemical entity remains the same, while the presence of the 13 C-labeled monosaccharide breaks the NMR chemical shift degeneracy that occurs in the non-labeled compound and allows the unique identification of the different components of the oligomer. The approach is demonstrated by a proof-of-concept study dealing with the interaction of a polylactosamine hexasaccharide with five different galectins that display distinct preferences for these entities.


Subject(s)
Amino Sugars/chemistry , Epitopes/chemistry , Galectins/chemistry , Nuclear Magnetic Resonance, Biomolecular , Polysaccharides/chemistry , Binding Sites , Carbon Isotopes
14.
Front Chem ; 9: 664097, 2021.
Article in English | MEDLINE | ID: mdl-33968903

ABSTRACT

The tandem-repeat Galectin-4 (Gal-4) contains two different domains covalently linked through a short flexible peptide. Both domains have been shown to bind preferentially to A and B histo blood group antigens with different affinities, although the binding details are not yet available. The biological relevance of these associations is unknown, although it could be related to its attributed role in pathogen recognition. The presentation of A and B histo blood group antigens in terms of peripheral core structures differs among tissues and from that of the antigen-mimicking structures produced by pathogens. Herein, the binding of the N-terminal domain of Gal-4 toward a group of differently presented A and B oligosaccharide antigens in solution has been studied through a combination of NMR, isothermal titration calorimetry (ITC), and molecular modeling. The data presented in this paper allow the identification of the specific effects that subtle chemical modifications within this antigenic family have in the binding to the N-terminal domain of Gal-4 in terms of affinity and intermolecular interactions, providing a structural-based rationale for the observed trend in the binding preferences.

15.
Glycobiology ; 31(8): 1005-1017, 2021 09 09.
Article in English | MEDLINE | ID: mdl-33909073

ABSTRACT

Paucimannosidic glycans are restricted to the core structure [Man1-3GlcNAc2Fuc0-1] of N-glycans and are rarely found in mammalian tissues. Yet, especially [Man2-3GlcNAc2Fuc1] have been found significantly upregulated in tumors, including in colorectal and liver cancer. Mannitou IgM is a murine monoclonal antibody that was previously shown to recognize Man3GlcNAc2 with an almost exclusive selectivity. Here, we have sought the definition of the minimal glycan epitope of Mannitou IgM, initiated by screening on a newly designed paucimannosidic glycan microarray; among the best binders were Man3GlcNAc2 and its α1,6 core-fucosylated variant, Man3GlcNAc2Fuc1. Unexpectedly and in contrast to earlier findings, Man5GlcNAc2-type structures bind equally well and a large tolerance was observed for substitutions on the α1,6 arm. It was confirmed that any substitution on the single α1,3-linked mannose completely abolishes binding. Surface plasmon resonance for kinetic measurements of Mannitou IgM binding, either directly on the glycans or as presented on omega-1 and kappa-5 soluble egg antigens from the helminth parasite Schistosoma mansoni, showed submicromolar affinities. To characterize the epitope in greater and atomic detail, saturation transfer difference nuclear magnetic resonance spectroscopy was performed with the Mannitou antigen-binding fragment. The STD-NMR data demonstrated the strongest interactions with the aliphatic protons H1 and H2 of the α1-3-linked mannose and weaker imprints on its H3, H4 and H5 protons. In conclusion, Mannitou IgM binding requires a nonsubstituted α1,3-linked mannose branch of paucimannose also on proteins, making it a highly specific tool for the distinction of concurrent human tumor-associated carbohydrate antigens.


Subject(s)
Glycoproteins , Schistosoma mansoni , Animals , DNA-Binding Proteins , Epitopes/chemistry , Fucose/metabolism , Glycoproteins/metabolism , Humans , Immunoglobulin M , Mammals/metabolism , Membrane Proteins , Mice , Polysaccharides/chemistry , Schistosoma mansoni/chemistry , Schistosoma mansoni/metabolism
16.
Angew Chem Int Ed Engl ; 59(52): 23763-23771, 2020 12 21.
Article in English | MEDLINE | ID: mdl-32915505

ABSTRACT

The glycan structures of the receptor binding domain of the SARS-CoV2 spike glycoprotein expressed in human HEK293F cells have been studied by using NMR. The different possible interacting epitopes have been deeply analysed and characterized, providing evidence of the presence of glycan structures not found in previous MS-based analyses. The interaction of the RBD 13 C-labelled glycans with different human lectins, which are expressed in different organs and tissues that may be affected during the infection process, has also been evaluated by NMR. In particular, 15 N-labelled galectins (galectins-3, -7 and -8 N-terminal), Siglecs (Siglec-8, Siglec-10), and C-type lectins (DC-SIGN, MGL) have been employed. Complementary experiments from the glycoprotein perspective or from the lectin's point of view have permitted to disentangle the specific interacting epitopes in each case. Based on these findings, 3D models of the interacting complexes have been proposed.


Subject(s)
Angiotensin-Converting Enzyme 2/chemistry , Lectins, C-Type/chemistry , Models, Molecular , Polysaccharides/chemistry , Receptors, Coronavirus/chemistry , SARS-CoV-2/metabolism , Spike Glycoprotein, Coronavirus/chemistry , Angiotensin-Converting Enzyme 2/metabolism , Glycosylation , HEK293 Cells , Humans , Lectins, C-Type/metabolism , Nuclear Magnetic Resonance, Biomolecular , Polysaccharides/metabolism , Protein Binding , Receptors, Coronavirus/metabolism , Spike Glycoprotein, Coronavirus/genetics , Spike Glycoprotein, Coronavirus/metabolism
17.
Chemistry ; 26(67): 15643-15653, 2020 Dec 01.
Article in English | MEDLINE | ID: mdl-32780906

ABSTRACT

The interaction of human galectin-1 with a variety of oligosaccharides, from di-(N-acetyllactosamine) to tetra-saccharides (blood B type-II antigen) has been scrutinized by using a combined approach of different NMR experiments, molecular dynamics (MD) simulations, and isothermal titration calorimetry. Ligand- and receptor-based NMR experiments assisted by computational methods allowed proposing three-dimensional structures for the different complexes, which explained the lack of enthalpy gain when increasing the chemical complexity of the glycan. Interestingly, and independently of the glycan ligand, the entropy term does not oppose the binding event, a rather unusual feature for protein-sugar interactions. CLEANEX-PM and relaxation dispersion experiments revealed that sugar binding affected residues far from the binding site and described significant changes in the dynamics of the protein. In particular, motions in the microsecond-millisecond timescale in residues at the protein dimer interface were identified in the presence of high affinity ligands. The dynamic process was further explored by extensive MD simulations, which provided additional support for the existence of allostery in glycan recognition by human galectin-1.


Subject(s)
Galectin 1 , Polysaccharides , Binding Sites , Galectin 1/chemistry , Galectin 1/metabolism , Humans , Ligands , Molecular Conformation , Molecular Dynamics Simulation , Polysaccharides/chemistry , Polysaccharides/metabolism , Protein Binding
18.
Pharmaceuticals (Basel) ; 13(8)2020 Aug 04.
Article in English | MEDLINE | ID: mdl-32759765

ABSTRACT

Fluorinated glycomimetics are frequently employed to study and eventually modulate protein-glycan interactions. However, complex glycans and their glycomimetics may display multiple binding epitopes that enormously complicate the access to a complete picture of the protein-ligand complexes. We herein present a new methodology based on the synergic combination of experimental 19F-based saturation transfer difference (STD) NMR data with computational protocols, applied to analyze the interaction between DC-SIGN, a key lectin involved in inflammation and infection events with the trifluorinated glycomimetic of the trimannoside core, ubiquitous in human glycoproteins. A novel 2D-STD-TOCSYreF NMR experiment was employed to obtain the experimental STD NMR intensities, while the Complete Relaxation Matrix Analysis (CORCEMA-ST) was used to predict that expected for an ensemble of geometries extracted from extensive MD simulations. Then, an in-house built computer program was devised to find the ensemble of structures that provide the best fit between the theoretical and the observed STD data. Remarkably, the experimental STD profiles obtained for the ligand/DC-SIGN complex could not be satisfactorily explained by a single binding mode, but rather with a combination of different modes coexisting in solution. Therefore, the method provides a precise view of those ligand-receptor complexes present in solution.

19.
Prev. tab ; 21(3): 97-109, jul.-sept. 2019. ilus, tab, graf
Article in Spanish | IBECS | ID: ibc-190645

ABSTRACT

INTRODUCCIÓN: El conocimiento del consumo de tabaco en un entorno laboral de salud es fundamental para poder desarrollar medidas de gestión sobre las poblaciones vulnerables. OBJETIVO: Conocer la prevalencia de consumo de tabaco y la exposición al humo de tabaco en el ambiente laboral de la Obra Social de Empleados Públicos de Mendoza, Argentina (OSEP). MATERIALES Y MÉTODOS: Estudio transversal, descriptivo, observacional, realizado en OSEP, entre octubre del 2016 y marzo del 2017. Encuesta anónima y voluntaria; formato adaptado de la Encuesta Mundial de Tabaquismo. Análisis estadístico mediante el programa MedCalc, tablas de contingencia y χ2 (p < 0,05). RESULTADOS: Población: 1.603. Edad promedio: 42 años.63,8% mujeres. El 61,3% eran profesionales de la salud y el 22,7% personal administrativo. El 85,2% tenía nivel educativo terciario/universitario. La prevalencia de fumadores actuales fue del 22,02%, en hombres del 26,7% y mujeres del 19,5%. El 35,5% del personal administrativo era fumador actual en comparación con el 16,6% de los profesionales de la salud (p < 0,0001). El 39% de las personas con nivel educativo primario/secundario fumaban actualmente en comparación con el 18,5% de los que tenía nivel terciario/universitario (p < 0,0001). La exposición al humo de tabaco dentro del entorno laboral fue del 34,5%. CONCLUSIONES: La prevalencia global de consumo de tabaco fue del 22,02%, y la exposición al humo de tabaco fue del 34,5%. La población con mayor prevalencia de consumo de tabaco resultó ser el personal administrativo y la de menor nivel educativo


INTRODUCTION: Knowledge regarding tobacco consumption in a health work environment is essential in order to be able to develop management measures in vulnerable populations. PURPUSE: To know the prevalence of tobacco consumption and exposure to tobacco smoke in the Obra Social de Empleados Públicos de Mendoza, Argentina (OSEP) work environment. MATERIALS AND METHODS: Cross-sectional, descriptive, observational study carried out in OSEP, between October 2016 and March 2017. Anonymous and voluntary survey; format adapted from the Global Tobacco Survey. Statistical analysis using MedCalc program, contingency tables and χ2 (p < 0,05). RESULTS: Population: 1,603. Average age: 42, 63.8% women.61.3% were health professionals and 22.7% were administrative personnel.85.2% had university-level education. The prevalence of current smokers was 22.02%; in men, 26.7% and women, 19.5%.35.5% of administrative staff were current smokers compared to 16.6% of health professionals (p < 0.0001).39% of people with primary/secondary education were currently smoking compared to 18.5% of those with a university level. The exposure to tobacco smoke in the workplace was 34.5%. CONCLUSIONS: The overall prevalence of tobacco use was 22,02%, and exposure to tobacco smoke was 34,5%. The population with the highest prevalence of tobacco use proved to be the administrative staff and the lowest educational level


Subject(s)
Humans , Male , Female , Adolescent , Young Adult , Adult , Middle Aged , Tobacco Use Disorder/epidemiology , Health Personnel/statistics & numerical data , Health Personnel/classification , Cross-Sectional Studies , Prevalence , Socioeconomic Factors , Age Factors , Sex Factors , Health Facility Environment , 16359 , Argentina/epidemiology
20.
ACS Chem Biol ; 14(7): 1660-1671, 2019 07 19.
Article in English | MEDLINE | ID: mdl-31283166

ABSTRACT

The dendritic cell-specific intracellular adhesion molecule-3-grabbing nonintegrin (DC-SIGN) is an important receptor of the immune system. Besides its role as pathogen recognition receptor (PRR), it also interacts with endogenous glycoproteins through the specific recognition of self-glycan epitopes, like LeX. However, this lectin represents a paradigmatic case of glycan binding promiscuity, and it also has been shown to recognize antigens with α1-α2 linked fucose, such as the histo blood group antigens, with similar affinities to LeX. Herein, we have studied the interaction in solution between DC-SIGN and the blood group A and B antigens, to get insights into the atomic details of such interaction. With a combination of different NMR experiments, we demonstrate that the Fuc coordinates the primary Ca2+ ion with a single binding mode through 3-OH and 4-OH. The terminal αGal/αGalNAc affords marginal direct polar contacts with the protein, but provides a hydrophobic hook in which V351 of the lectin perfectly fits. Moreover, we have found that αGal, but not αGalNAc, is a weak binder itself for DC-SIGN, which could endow an additional binding mode for the blood group B antigen, but not for blood group A.


Subject(s)
ABO Blood-Group System/metabolism , Autoantigens/metabolism , Cell Adhesion Molecules/metabolism , Lectins, C-Type/metabolism , Receptors, Cell Surface/metabolism , ABO Blood-Group System/chemistry , Autoantigens/chemistry , Binding Sites , Cell Adhesion Molecules/chemistry , Fucose/chemistry , Fucose/metabolism , Humans , Lectins, C-Type/chemistry , Molecular Docking Simulation , Protein Binding , Receptors, Cell Surface/chemistry
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