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1.
Anal Chem ; 78(17): 6109-14, 2006 Sep 01.
Article in English | MEDLINE | ID: mdl-16944891

ABSTRACT

A procedure for the automated determination of isotopic abundances of silicon from biogenic and lithogenic particulate matter and from dissolved silicon in fresh or saltwaters is reported. Samples are purified using proven procedures through the reaction of Si with acidified ammonium molybdate, followed by precipitation with triethylamine and combustion of the precipitate to yield silicon dioxide. The silicon dioxide is converted to cesium hexafluosilicate by dissolution in hydrogen fluoride and the addition of cesium chloride. Isotopic analysis is accomplished by decomposing the cesium hexafluosilicate with concentrated sulfuric acid to generate silicon tetrafluoride gas. Silicon tetrafluoride is purified cryogenically and analyzed on a gas source isotope ratio mass spectrometer. Yields of silicon tetrafluoride are >99.5%. The procedure can be automated by modifying commercial inlet systems designed for carbonate analysis. The procedure is free of memory effects and isotopic biases. Reproducibility is +/-0.03-0.10 per thousand for a variety of natural and synthetic materials.


Subject(s)
Acids/chemistry , Silicon/analysis , Silicon/chemistry , Fluorides/chemistry , Fluorine/chemistry , Isotopes/chemistry , Mass Spectrometry , Silicic Acid/chemistry
2.
Science ; 306(5693): 79-86, 2004 Oct 01.
Article in English | MEDLINE | ID: mdl-15459382

ABSTRACT

Diatoms are unicellular algae with plastids acquired by secondary endosymbiosis. They are responsible for approximately 20% of global carbon fixation. We report the 34 million-base pair draft nuclear genome of the marine diatom Thalassiosira pseudonana and its 129 thousand-base pair plastid and 44 thousand-base pair mitochondrial genomes. Sequence and optical restriction mapping revealed 24 diploid nuclear chromosomes. We identified novel genes for silicic acid transport and formation of silica-based cell walls, high-affinity iron uptake, biosynthetic enzymes for several types of polyunsaturated fatty acids, use of a range of nitrogenous compounds, and a complete urea cycle, all attributes that allow diatoms to prosper in aquatic environments.


Subject(s)
Biological Evolution , Diatoms/genetics , Ecosystem , Genome , Sequence Analysis, DNA , Adaptation, Physiological , Algal Proteins/chemistry , Algal Proteins/genetics , Algal Proteins/physiology , Animals , Cell Nucleus/genetics , Chromosomes , DNA/genetics , Diatoms/chemistry , Diatoms/cytology , Diatoms/metabolism , Energy Metabolism , Iron/metabolism , Light , Light-Harvesting Protein Complexes/chemistry , Light-Harvesting Protein Complexes/genetics , Light-Harvesting Protein Complexes/metabolism , Mitochondria/genetics , Molecular Sequence Data , Nitrogen/metabolism , Photosynthesis , Plastids/genetics , Restriction Mapping , Sequence Alignment , Silicic Acid/metabolism , Symbiosis , Urea/metabolism
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