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1.
Plant Physiol ; 126(1): 278-88, 2001 May.
Article in English | MEDLINE | ID: mdl-11351091

ABSTRACT

An 8.5-kb cosmid containing the KORRIGAN gene complements the cellulose-deficient rsw2-1 mutant of Arabidopsis. Three temperature-sensitive alleles of rsw2 show single amino acid mutations in the putative endo-1,4-beta-glucanase encoded by KOR. The F1 from crosses between kor-1 and rsw2 alleles shows a weak, temperature-sensitive root phenotype. The shoots of rsw2-1 seedlings produce less cellulose and accumulate a short chain, readily extractable glucan resembling that reported for rsw1 (which is defective in a putative glycosyltransferase required for cellulose synthesis). The double mutant (rsw2-1 rsw1) shows further reductions in cellulose production relative to both single mutants, constitutively slow root growth, and enhanced temperature-sensitive responses that are typically more severe than in either single mutant. Abnormal cytokinesis and severely reduced birefringent retardation in elongating root cell walls of rsw2 link the enzyme to cellulose production for primary cell walls and probably cell plates. The Rsw2(-) phenotype generally resembles the Kor(-) and cellulose-deficient Rsw1(-) phenotypes, but anther dehiscence is impaired in Rsw2-1(-). The findings link a second putative enzyme activity to cellulose synthesis in primary cell walls of Arabidopsis and further increases the parallels to cellulose synthesis in Agrobacterium tumefaciens where the celA and celC genes are required and encode a putative glycosyltransferase and an endo-1,4-beta-glucanase related to RSW1 and KOR, respectively.


Subject(s)
Alleles , Arabidopsis/metabolism , Cell Cycle , Cellulase/metabolism , Cellulose/biosynthesis , Plant Proteins/genetics , Arabidopsis/cytology , Arabidopsis/enzymology , Cellulase/genetics , Microscopy, Electron, Scanning , Phenotype , Plant Roots/growth & development , Plant Roots/ultrastructure , Temperature
2.
Plant Cell ; 12(12): 2409-2424, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11148287

ABSTRACT

Mutants at the PROCUSTE1 (PRC1) locus show decreased cell elongation, specifically in roots and dark-grown hypocotyls. Cell elongation defects are correlated with a cellulose deficiency and the presence of gapped walls. Map-based cloning of PRC1 reveals that it encodes a member (CesA6) of the cellulose synthase catalytic subunit family, of which at least nine other members exist in Arabidopsis. Mutations in another family member, RSW1 (CesA1), cause similar cell wall defects in all cell types, including those in hypocotyls and roots, suggesting that cellulose synthesis in these organs requires the coordinated expression of at least two distinct cellulose synthase isoforms.


Subject(s)
Arabidopsis Proteins , Arabidopsis/cytology , Darkness , Glucosyltransferases/genetics , Alleles , Arabidopsis/genetics , Arabidopsis/growth & development , Base Sequence , Cellulose/metabolism , Cloning, Molecular , DNA Primers , Mutation , Plant Roots/cytology , Plant Roots/growth & development , RNA, Messenger/genetics
3.
Plant J ; 14(5): 643-52, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9675907

ABSTRACT

Large numbers of genes are being discovered on a daily basis for a variety of organisms including Arabidopsis thaliana. To obtain more functional information on these genes, efficient expression monitoring methods need to be developed. In this report we studied the steady-state mRNA levels of over 800 Arabidopsis genes in parallel using high-density arrays of partially sequenced cDNA. The technology is simple and robust and reliably permits the detection of down to twofold variation in mRNA levels. The detection limit lies below 0.01% of the total mRNA population. The comparison of the profiles obtained for light-grown and dark-grown seedlings revealed significant variations in mRNA levels for about 16% of the cDNA investigated. This technology not only provides new functional information on anonymous genes, and thus may guide reverse-genetics approaches, but also constitutes a powerful tool for global gene expression studies, with many potential applications in plant biology.


Subject(s)
Arabidopsis/genetics , Chromosome Mapping , DNA, Complementary/chemistry , Transcription, Genetic , Arabidopsis/metabolism , Cloning, Molecular , DNA Damage , DNA Repair , Genetic Markers , Genetic Variation , Polymerase Chain Reaction , RNA, Messenger/biosynthesis , Sequence Analysis, DNA/methods
4.
Eur J Biochem ; 246(2): 518-29, 1997 Jun 01.
Article in English | MEDLINE | ID: mdl-9208946

ABSTRACT

Two methyl transfers are involved in the course of plant sterol biosynthesis and responsible for the formation of 24-alkyl sterols (mainly 24-ethyl sterols) which play major roles in plant growth and development. The first methyl transfer applies to cycloartenol, the second one to 24-methylene lophenol. Five cDNA clones encoding two Arabidopsis thaliana, two Nicotiana tabacum and one Ricinus communis S-adenosyl-L-methionine (AdoMet) sterol methyltransferases (SMT) were isolated. The deduced amino acid sequences of A. thaliana and N. tabacum SMT are about 80% identical in all possible combinations. In contrast they are about 40% identical with the deduced amino acid sequence of R. communis SMT and the published Glycine max sequence. Both A. thaliana and one N. tabacum SMT cDNAs were expressed in a yeast null mutant erg6, deficient in AdoMet zymosterol C24-methyltransferase and containing C24-non-alkylated sterols. In all cases, several 24-ethylidene sterols were synthesized. A thorough study of the sterolic composition of erg6 expressing the A. thaliana cDNA 411 (erg6-4118-pYeDP60) showed 24-methylene and 24-ethylidene derivatives of 4-desmethyl, 4alpha-methyl and 4,4-dimethyl sterols as well as 24-methyl and 24-ethyl derivatives of 4-desmethyl sterols. The structure of 5alpha-stigmasta-8, Z-24(24(1))-dien-3beta-ol, the major sterol of transformed yeasts, was demonstrated by 400 MHz 1H NMR. Microsomes from erg6-4118-pYeDP60 were shown to possess AdoMet-dependent sterol-C-methyltransferase activity. Delipidated preparations of these microsomes converted cycloartenol into 24-methylene cycloartanol and 24-methylene lophenol into 24-ethylidene lophenol, thus allowing the first identification of a plant sterol-C-methyltransferase cDNA. The catalytic efficiency of the expressed SMT was 17-times higher with 24-methylene lophenol than with cycloartenol. This result provides evidence that the A. thaliana cDNA 411 (and most probably the 3 plant SMT cDNAs presenting 80% identity with it) encodes a 24-methylene lophenol-C-24(1) methyltransferase catalyzing the second methylation step of plant sterol biosynthesis.


Subject(s)
Methyltransferases/genetics , Plants/metabolism , Sterols/metabolism , Amino Acid Sequence , DNA, Complementary , Gas Chromatography-Mass Spectrometry , Methylation , Methyltransferases/metabolism , Molecular Sequence Data , Plants/enzymology , Sequence Homology, Amino Acid , Sterols/biosynthesis , Substrate Specificity
5.
Curr Genet ; 32(5): 358-60, 1997 Nov.
Article in English | MEDLINE | ID: mdl-9371887

ABSTRACT

Two identical "chloroplast-like" tRNAAsn genes, trnN1 and trnN2, have been identified in the potato (Solanum tuberosum) mitochondrial genome. The flanking sequences of trnN1 are unrelated to the corresponding authentic potato chloroplast regions, whilst those of trnN2 are very similar to the chloroplast sequences. The trnN1 copy is present in the mitochondrial genome of various plants whereas the second copy, trnN2, is absent from all the other plant genomes studied so far. Interestingly, both trnN copies are expressed in potato mitochondria. Sequences flanking the chloroplast-like tRNAHis gene (trnH), present as a single copy in the potato mitochondrial DNA, are unrelated to the corresponding chloroplast sequences, whereas chloroplast-derived sequences have been maintained in the vicinity of the maize chloroplast-like mitochondrial trnH gene. However, both the potato and the maize trnH are expressed in mitochondria.


Subject(s)
DNA, Mitochondrial/genetics , DNA, Plant/genetics , Genes, Plant , Solanum tuberosum/genetics , Base Sequence , Chloroplasts/genetics , Chromosome Mapping , DNA Primers/genetics , Evolution, Molecular , Multigene Family , Polymerase Chain Reaction , RNA, Plant/genetics , RNA, Transfer, Asn/genetics
6.
FEBS Lett ; 381(1-2): 87-92, 1996 Feb 26.
Article in English | MEDLINE | ID: mdl-8641446

ABSTRACT

Using an EST-cDNA probe, a full-length cDNA (411) sequence of 1411 bp was isolated from A. thaliana. This sequence contained features typical of methyltransferases in general and in particular showed 38% identity with ERG6, a S. cerevisiae gene which encodes the zymosterol-C-24-methyltransferase. A yeast vector containing this ORF (4118-pYeDP60) was used to transform a wild type S. cerevisiae which accumulates predominantly ergosterol, a 24-methyl sterol as well as a mutant erg6 null mutant accumulating principally zymosterol, a sterol non-alkylated at C-24. In both cases, several 24-ethyl- and 24-ethylidene sterols were synthetized indicating that the 4118 cDNA encodes a plant sterol C-methyltransferase able to perform two sequential methylations of the sterol side chain.


Subject(s)
Arabidopsis/enzymology , Methyltransferases/metabolism , Saccharomyces cerevisiae/metabolism , Sterols/metabolism , Transformation, Genetic , Amino Acid Sequence , Arabidopsis/genetics , Base Sequence , Cloning, Molecular , DNA Probes , DNA, Complementary , DNA, Plant/isolation & purification , Escherichia coli , Gene Library , Genes, Plant , Methyltransferases/biosynthesis , Methyltransferases/genetics , Molecular Sequence Data , Plasmids , Recombinant Proteins/biosynthesis , Recombinant Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/genetics , Sequence Homology, Amino Acid , Sterols/chemistry , Substrate Specificity
7.
EMBO J ; 14(22): 5626-37, 1995 Nov 15.
Article in English | MEDLINE | ID: mdl-8521820

ABSTRACT

We have identified an Arabidopsis thaliana CDC48 gene which, unlike the putative mammalian homologue vasolin-containing protein (VCP), functionally complements Saccharomyces cerevisiae cdc48 mutants. CDC48 is an essential gene in S. cerevisiae and genetic studies suggest a role in spindle pole body separation. Biochemical studies link VCP function to membrane trafficking and signal transduction. We have described the AtCDC48 expression pattern in a multicellular eukaryote; the zones of cell division, expansion and differentiation are physically separated in higher plants, thus allowing the analysis of in situ expression patterns with respect to the state of cell proliferation. AtCDC48 is highly expressed in the proliferating cells of the vegetative shoot, root, floral inflorescence and flowers, and in rapidly growing cells. AtCDC48 mRNA and the encoded protein are up-regulated in the developing microspores and ovules. AtCDC48 expression is down-regulated in most differentiated cell types. AtCDC48p was primarily localized to the nucleus and, during cytokinesis, to the phragmoplast, a site where membrane vesicles are targeted in the deposition of new cell wall materials. This study shows that the essential cell division function of CDC48 has been conserved by, at least, some multicellular eukaryotes and suggests that in higher plants, CDC48 functions in cell division and growth processes.


Subject(s)
Arabidopsis/genetics , Cell Cycle Proteins/genetics , Plant Proteins/genetics , Adenosine Triphosphatases , Amino Acid Sequence , Animals , Arabidopsis/cytology , Arabidopsis/metabolism , Base Sequence , Cell Cycle Proteins/chemistry , Cell Cycle Proteins/metabolism , Cell Division/genetics , DNA, Plant , Gene Expression Regulation, Plant , Genes, Plant , Immunoblotting , Molecular Sequence Data , Plant Proteins/metabolism , Saccharomyces cerevisiae Proteins , Sequence Homology, Amino Acid , Valosin Containing Protein
8.
Plant J ; 4(6): 1051-61, 1993 Dec.
Article in English | MEDLINE | ID: mdl-8281187

ABSTRACT

As part of the goal to generate a detailed transcript map for Arabidopsis thaliana, 1152 single run sequences (expressed sequence tags or ESTs) have been determined from cDNA clones taken at random in libraries prepared from different sources of plant material: developing siliques, etiolated seedlings, flower buds, and cultured cells. Eight hundred and ninety-five different genes could be identified, 32% of which showed significant similarity to existing sequences in Arabidopsis and an array of other organisms. These sequences in combination with their positioning on the Arabidopsis genetic map will not only constitute a new set of molecular markers for genome analysis in Arabidopsis but also provide a direct route for the in vivo analysis of their gene products. The sequences have been made available to the public databases.


Subject(s)
Arabidopsis/genetics , DNA, Complementary/genetics , Animals , Gene Expression , Genes, Plant , Humans , Information Systems , Sequence Homology, Nucleic Acid
11.
Pathol Biol (Paris) ; 28(5): 335-40, 1980 May.
Article in French | MEDLINE | ID: mdl-6992071

ABSTRACT

Using the effect of soluble sulfides in an alkaline medium on sodium nitroprusside, the authors were able to describe a method for titrating this substance. So, they could determine serum nitroprusside levels in patients treated for accelerated hypertension.


Subject(s)
Ferricyanides/blood , Hypertension, Malignant/drug therapy , Nitroprusside/blood , Adult , Humans , Methods , Middle Aged , Nitroprusside/therapeutic use , Spectrophotometry
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