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1.
Biochemistry ; 62(22): 3222-3233, 2023 11 21.
Article in English | MEDLINE | ID: mdl-37917797

ABSTRACT

The varying conformational states of amyloid-forming protein monomers can determine their fibrillation outcome. In this study, we utilize solution NMR and the paramagnetic relaxation enhancement (PRE) effect to observe monomer properties of the repeat domain (RPT) from a human functional amyloid, premelanosomal protein, Pmel17. After excision from the full-length protein, RPT can self-assemble into amyloid fibrils, functioning as a scaffold for melanin deposition. Here, we report possible conformational states of the short RPT (sRPT) isoform, which has been demonstrated to be a fibrillation nucleator. NMR experiments were performed to determine conformational differences in sRPT by comparing aggregation-prone vs nonaggregating solution conditions. We observed significant chemical shift perturbations localized to residues near the C-terminus, demonstrating that the local chemical environment of the amyloid core region is highly sensitive to changes in pH. Next, we introduced cysteine point mutations for the covalent attachment of PRE ligands to sRPT to facilitate the observation of intramolecular interactions. We also utilized solvent PRE molecules with opposing charges to measure changes in the electrostatic potential of sRPT in different pH environments. These observed PRE effects offer insight into initial molecular events that might promote intermolecular interactions, which can trigger fibrillation. Taken together, our results show that sRPT monomers adopt a conformation inconsistent with a fully random coil at neutral pH and undergo conformational changes at lower pH values. These observations highlight regulatory mechanisms via organelle-associated pH conditions that can affect the fibrillation activity of proteins like RPT.


Subject(s)
Amyloid , Amyloidogenic Proteins , Humans , Amyloid/chemistry , Protein Isoforms , Magnetic Resonance Spectroscopy , Hydrogen-Ion Concentration
2.
Methods Mol Biol ; 2551: 79-93, 2023.
Article in English | MEDLINE | ID: mdl-36310198

ABSTRACT

The premelanosomal protein (Pmel17) is a human functional amyloid that promotes pigmentation by serving as a scaffold for melanin polymerization. This occurs within the melanosome, where Pmel17 is first proteolyzed into smaller domain(s) that are responsible for fibril formation. Our work has shown that the Pmel17 repeat domain (RPT, residues 315-444) forms amyloid fibrils in vitro under acidic conditions similar to those found in melanosomes. Mechanistically, this is driven by the protonation of acidic residues, resulting in charge neutralization and subsequent aggregation. Interestingly, the deprotonation of acidic residues leads to rapid disaggregation, highlighting a reversible mechanism of fibril formation and dissolution thus far only observed for functional amyloid proteins. In this chapter, we describe how to monitor pH-dependent RPT aggregation and disaggregation using extrinsic thioflavin-T and intrinsic tryptophan fluorescence, respectively. These methods can also be adapted more broadly to investigate the reversibility of other amyloid systems, both functional and pathogenic.


Subject(s)
Amyloid , Amyloidosis , Humans , Kinetics , Amyloid/chemistry , Melanosomes/metabolism , Amyloidogenic Proteins/metabolism , Amyloidosis/metabolism , Hydrogen-Ion Concentration
3.
Protein Expr Purif ; 187: 105944, 2021 11.
Article in English | MEDLINE | ID: mdl-34293440

ABSTRACT

The pre-melanosomal protein (Pmel17) is a human functional amyloid that supports melanin biosynthesis within melanocytes. This occurs in the melanosome, a membrane-bound organelle with an acidic intraluminal pH. The repeat region of Pmel17 (RPT, residues 315-444) has been previously shown to form amyloid aggregates under acidic melanosomal conditions, but not under neutral cytosolic conditions, when expressed and purified using a C-terminal hexa-histidine tag (RPT-His). Given the importance of protonation states in RPT-His aggregation, we questioned whether the histidine tag influenced the pH-dependent behavior. In this report, we generated a tagless RPT by inserting a tobacco etch virus (TEV) protease recognition sequence (ENLYGQ(G/S)) immediately upstream of a native glycine residue at position 312 in Pmel17. After purification of the fusion construct using a histidine tag, cleavage with TEV protease generated a fully native RPT (nRPT) spanning resides 312-444. We characterized the aggregation of nRPT, which formed amyloid fibrils under acidic conditions (pH ≤ 6) but not at neutral pH. Characterizing the morphologies of nRPT aggregates using transmission electron microscopy revealed a pH-dependent maturation from short, curved structures at pH 4 to paired, rod-like fibrils at pH 6. This was accompanied by a secondary structural transition from mixed random coil/ß-sheet at pH 4 to canonical ß-sheet at pH 6. We also show that pre-formed nRPT fibrils undergo disaggregation upon dilution into pH 7 buffer. More broadly, this strategy can be utilized to generate native amyloidogenic domains from larger proteins by utilizing intrinsic N-terminal glycine or serine residues.


Subject(s)
Amyloid/chemistry , Melanosomes/metabolism , gp100 Melanoma Antigen/chemistry , Amino Acid Sequence , Endopeptidases/chemistry , Fluorescent Dyes/chemistry , Glycine/chemistry , Histidine/chemistry , Humans , Hydrogen-Ion Concentration , Protein Aggregates , Serine/chemistry , Tandem Mass Spectrometry , gp100 Melanoma Antigen/genetics
4.
Mov Disord ; 36(7): 1489-1498, 2021 07.
Article in English | MEDLINE | ID: mdl-34021920

ABSTRACT

Parkinson's disease (PD) is a neurodegenerative disorder associated with the death of dopaminergic neurons within the substantia nigra of the brain. Melanoma is a cancer of melanocytes, pigmented cells that give rise to skin tone, hair, and eye color. Although these two diseases fundamentally differ, with PD leading to cell degeneration and melanoma leading to cell proliferation, epidemiological evidence has revealed a reciprocal relationship where patients with PD are more susceptible to melanoma and patients with melanoma are more susceptible to PD. The hallmark pathology observed in PD brains is intracellular inclusions, of which the primary component is proteinaceous α-synuclein (α-syn) amyloid fibrils. α-Syn also has been detected in cultured melanoma cells and tissues derived from patients with melanoma, where an inverse correlation exists between α-syn expression and pigmentation. Although this has led to the prevailing hypothesis that α-syn inhibits enzymes involved in melanin biosynthesis, we recently reported an alternative hypothesis in which α-syn interacts with and modulates the aggregation of Pmel17, a functional amyloid that serves as a scaffold for melanin biosynthesis. In this perspective, we review the literature describing the epidemiological and molecular connections between PD and melanoma, presenting both the prevailing hypothesis and our amyloid-centric hypothesis. We offer our views of the essential questions that remain unanswered to motivate future investigations. Understanding the behavior of α-syn in melanoma could not only provide novel approaches for treating melanoma but also could reveal insights into the role of α-syn in PD. © 2021 International Parkinson and Movement Disorder Society.


Subject(s)
Melanoma , Parkinson Disease , Amyloid/metabolism , Humans , Substantia Nigra/metabolism , alpha-Synuclein/metabolism
5.
FASEB J ; 35(2): e21318, 2021 02.
Article in English | MEDLINE | ID: mdl-33508158

ABSTRACT

Alzheimer's disease (AD) is a progressive neurodegenerative disorder that affects cognition and memory. Recent advances have helped identify many clinical sub-types in AD. Mounting evidence point toward structural polymorphism among fibrillar aggregates of amyloid-ß (Aß) to being responsible for the phenotypes and clinical manifestations. In the emerging paradigm of polymorphism and prion-like propagation of aggregates in AD, the role of low molecular weight soluble oligomers, which are long known to be the primary toxic agents, in effecting phenotypes remains inconspicuous. In this study, we present the characterization of three soluble oligomers of Aß42, namely 14LPOs, 16LPOs, and GM1Os with discreet biophysical and biochemical properties generated using lysophosphatidyl glycerols and GM1 gangliosides. The results indicate that the oligomers share some biophysical similarities but display distinctive differences with GM1Os. Unlike the other two, GM1Os were observed to be complexed with the lipid upon isolation. It also differs mainly in detection by conformation-sensitive dyes and conformation-specific antibodies, temperature and enzymatic stability, and in the ability to propagate morphologically-distinct fibrils. GM1Os also show distinguishable biochemical behavior with pronounced neuronal toxicity. Furthermore, all the oligomers induce cerebral amyloid angiopathy (CAA) and plaque burden in transgenic AD mice, which seems to be a consistent feature among all lipid-derived oligomers, but 16LPOs and GM1Os displayed significantly higher effect than the others. These results establish a correlation between molecular features of Aß42 oligomers and their distinguishable effects in transgenic AD mice attuned by lipid characteristics, and therefore help bridge the knowledge gap in understanding how oligomer conformers could elicit AD phenotypes.


Subject(s)
Amyloid beta-Peptides/metabolism , Amyloid/metabolism , Lipids/pharmacology , Amyloid/drug effects , Animals , Cell Line, Tumor , Cell Survival/physiology , Circular Dichroism , Dynamic Light Scattering , G(M1) Ganglioside/pharmacology , Immunohistochemistry , Magnetic Resonance Spectroscopy , Mice , Mice, Transgenic , Microscopy, Atomic Force , Phosphatidylglycerols/pharmacology , Plaque, Amyloid/metabolism , Spectrometry, Mass, Electrospray Ionization , Spectroscopy, Fourier Transform Infrared
6.
Proc Natl Acad Sci U S A ; 117(37): 22671-22673, 2020 09 15.
Article in English | MEDLINE | ID: mdl-32868414

ABSTRACT

An epidemiological connection exists between Parkinson's disease (PD) and melanoma. α-Synuclein (α-syn), the hallmark pathological amyloid observed in PD, is also elevated in melanoma, where its expression is inversely correlated with melanin content. We present a hypothesis that there is an amyloid link between α-syn and Pmel17 (premelanosomal protein), a functional amyloid that promotes melanogenesis. Using SK-MEL 28 human melanoma cells, we show that endogenous α-syn is present in melanosomes, the organelle where melanin polymerization occurs. Using in vitro cross-seeding experiments, we show that α-syn fibrils stimulate the aggregation of a Pmel17 fragment constituting the repeat domain (RPT), an amyloidogenic domain essential for fibril formation in melanosomes. The cross-seeded fibrils exhibited α-syn-like ultrastructural features that could be faithfully propagated over multiple generations. This cross-seeding was unidirectional, as RPT fibrils did not influence α-syn aggregation. These results support our hypothesis that α-syn, a pathogenic amyloid, modulates Pmel17 aggregation in the melanosome, defining a molecular link between PD and melanoma.


Subject(s)
Melanoma/metabolism , Parkinson Disease/metabolism , alpha-Synuclein/metabolism , gp100 Melanoma Antigen/metabolism , Cell Line, Tumor , Humans , Melanoma/genetics , Melanosomes/chemistry , Melanosomes/genetics , Melanosomes/metabolism , Parkinson Disease/genetics , Protein Aggregates , Protein Domains , alpha-Synuclein/chemistry , alpha-Synuclein/genetics , gp100 Melanoma Antigen/chemistry , gp100 Melanoma Antigen/genetics
7.
J Biol Chem ; 295(21): 7544-7553, 2020 05 22.
Article in English | MEDLINE | ID: mdl-32277052

ABSTRACT

The premelanosomal protein (PMEL17) forms functional amyloid fibrils involved in melanin biosynthesis. Multiple PMEL17 isoforms are produced, two of which arise from excision of a cryptic intron within the amyloid-forming repeat (RPT) domain, leading to long (lRPT) and short (sRPT) isoforms with 10 and 7 imperfect repeats, respectively. Both lRPT and sRPT isoforms undergo similar pH-dependent mechanisms of amyloid formation and fibril dissolution. Here, using human PMEL17, we tested the hypothesis that the minor, but more aggregation-prone, sRPT facilitates amyloid formation of lRPT. We observed that cross-seeding by sRPT fibrils accelerates the rate of lRPT aggregation, resulting in propagation of an sRPT-like twisted fibril morphology, unlike the rodlike structure that lRPT normally adopts. This templating was specific, as the reversed reaction inhibited sRPT fibril formation. Despite displaying ultrastructural differences, self- and cross-seeded lRPT fibrils had a similar ß-sheet structured core, revealed by Raman spectroscopy, limited-proteolysis, and fibril disaggregation experiments, suggesting the fibril twist is modulated by N-terminal residues outside the amyloid core. Interestingly, bioinformatics analysis of PMEL17 homologs from other mammals uncovered that long and short RPT isoforms are conserved among members of this phylogenetic group. Collectively, our results indicate that the short isoform of RPT serves as a "nucleator" of PMEL17 functional amyloid formation, mirroring how bacterial functional amyloids assemble during biofilm formation. Whereas bacteria regulate amyloid assembly by using individual genes within the same operon, we propose that the modulation of functional amyloid formation in higher organisms can be accomplished through alternative splicing.


Subject(s)
Alternative Splicing , Amyloid/chemistry , Protein Aggregates , gp100 Melanoma Antigen/chemistry , Amyloid/genetics , Amyloid/metabolism , Humans , Protein Isoforms , Protein Structure, Secondary , gp100 Melanoma Antigen/genetics , gp100 Melanoma Antigen/metabolism
8.
Chembiochem ; 21(11): 1582-1586, 2020 06 02.
Article in English | MEDLINE | ID: mdl-31960993

ABSTRACT

Conformational changes in α-synuclein (α-syn) are central to its biological function and Parkinson's disease pathology. Here, terminal alkynes (homopropargylglycine) were employed as environmentally sensitive Raman probes at residues 1, 5, 116, and 127 to characterize soluble (disordered), micelle-bound (α-helical), and fibrillar (ß-sheet) α-syn. Along with the full-length protein, a disease-related C-terminal truncation (1-115) was also studied. For the first time, ß-sheet α-syn amyloid structure was detected by the amide-I band in N27 dopaminergic rat cells, where a reciprocal relationship between levels of fibrils and lipids was seen. Site-specific spectral features of the terminal alkynes also revealed the heterogeneity of the cellular environment. This work shows the versatility of Raman microspectroscopy and the power of unnatural amino acids in providing structural and residue-level insights in solution and in cells.


Subject(s)
Alkynes/chemistry , Amyloid/pharmacology , Dopaminergic Neurons/drug effects , Glycine/analogs & derivatives , Molecular Probes/chemistry , Sequence Deletion , alpha-Synuclein/chemistry , Alkynes/metabolism , Animals , Cell Line , Cloning, Molecular , Dopaminergic Neurons/cytology , Dopaminergic Neurons/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Glycine/chemistry , Glycine/metabolism , Humans , Hydrophobic and Hydrophilic Interactions , Lysophosphatidylcholines/chemistry , Lysophosphatidylcholines/metabolism , Micelles , Molecular Probes/metabolism , Rats , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Spectrum Analysis, Raman/methods , alpha-Synuclein/genetics , alpha-Synuclein/metabolism
9.
J Chem Phys ; 150(7): 075101, 2019 Feb 21.
Article in English | MEDLINE | ID: mdl-30795679

ABSTRACT

As the primary toxic species in the etiology of Alzheimer disease (AD) are low molecular weight oligomers of Aß, it is crucial to understand the structure of Aß oligomers for gaining molecular insights into AD pathology. We have earlier demonstrated that in the presence of fatty acids, Aß42 peptides assemble as 12-24mer oligomers. These Large Fatty Acid-derived Oligomers (LFAOs) exist predominantly as 12mers at low and as 24mers at high concentrations. The 12mers are more neurotoxic than the 24mers and undergo self-replication, while the latter propagate to morphologically distinct fibrils with succinct pathological consequences. In order to glean into their functional differences and similarities, we have determined their structures in greater detail by combining molecular dynamic simulations with biophysical measurements. We conjecture that the LFAO are made of Aß units in an S-shaped conformation, with the 12mers forming a double-layered hexamer ring (6 × 2) while the structure of 24mers is a double-layered dodecamer ring (12 × 2). A closer inspection of the (6 × 2) and (12 × 2) structures reveals a concentration and pH dependent molecular reorganization in the assembly of 12 to 24mers, which seems to be the underlying mechanism for the observed biophysical and cellular properties of LFAOs.


Subject(s)
Amyloid beta-Peptides/chemistry , Fatty Acids/chemistry , Peptide Fragments/chemistry , Protein Multimerization , Molecular Dynamics Simulation , Protein Structure, Quaternary
10.
Biochem J ; 476(5): 859-873, 2019 03 12.
Article in English | MEDLINE | ID: mdl-30782973

ABSTRACT

Granulins (GRNs 1-7) are cysteine-rich proteolytic products of progranulin (PGRN) that have recently been implicated in neurodegenerative diseases including frontotemporal dementia (FTD) and Alzheimer's disease (AD). Their precise mechanism in these pathologies remains uncertain, but both inflammatory and lysosomal roles have been observed for GRNs. Among the seven GRNs, GRN-3 is well characterized and is implicated within the context of FTD. However, the relationship between GRN-3 and amyloid-ß (Aß), a protein relevant in AD pathology, has not yet been explored. To gain insight into this mechanism, we investigated the effect of both oxidized and reduced GRN-3 on Aß aggregation and found that both GRN-3 (oxidized) and rGRN-3 (reduced) bind to monomeric and oligomeric Aß42 to promote rapid fibril formation with subtle rate differences. As low molecular weight oligomers of Aß are well-established neurotoxins, rapid promotion of fibrils by GRN-3 mitigates Aß42-induced cellular apoptosis. These data provide valuable insights in understanding GRN-3's ability to modulate Aß-induced toxicity under redox control and presents a new perspective toward AD pathology. These results also prompt further investigation into the role(s) of other GRNs in AD pathogenesis.


Subject(s)
Alzheimer Disease , Amyloid beta-Peptides , Apoptosis , Granulins , Peptide Fragments , Protein Aggregation, Pathological , Alzheimer Disease/genetics , Alzheimer Disease/metabolism , Alzheimer Disease/pathology , Amyloid beta-Peptides/chemistry , Amyloid beta-Peptides/genetics , Amyloid beta-Peptides/metabolism , Cell Line, Tumor , Granulins/chemistry , Granulins/genetics , Granulins/metabolism , Humans , Oxidation-Reduction , Peptide Fragments/chemistry , Peptide Fragments/genetics , Peptide Fragments/metabolism , Protein Aggregation, Pathological/genetics , Protein Aggregation, Pathological/metabolism , Protein Aggregation, Pathological/pathology
11.
Biochim Biophys Acta Proteins Proteom ; 1867(10): 961-969, 2019 10.
Article in English | MEDLINE | ID: mdl-30716507

ABSTRACT

The pre-melanosomal protein (Pmel17) aggregates within melanosomes to form functional amyloid fibrils that facilitate melanin polymerization. The repeat domain (RPT) of Pmel17 fibrillates under strict acidic melanosomal pH. Alternative splicing results in a shortened repeat domain (sRPT), which also forms amyloid fibrils. Here, we explored the effects of pH and protein concentration on sRPT aggregation by monitoring the intrinsic fluorescence of the sole tryptophan at position 381 (381W). 381W emission properties revealed changes of local environment polarity for sRPT fibrils formed at different pH. At pH 4, fibrils formed rapidly with no lag phase. A high 381W intensity was observed with a slight blue shift (10 nm). These fibrils underwent further structural rearrangements at intermediate pH (5-6), mirroring that of melanosome maturation, which initiates at pH 4 and increases to near neutral pH. In contrast, typical sigmoidal kinetics were observed at pH 6 with slower rates and 381W exhibited quenched emission. Interestingly, biphasic kinetics were observed at pH 5 in a protein concentration-dependent manner. A large 381W blue shift (23 nm) was measured, indicating a more hydrophobic environment for fibrils made at pH 5. Consistent with 381W fluorescence, Raman spectroscopy revealed molecular level perturbations in sRPT fibrils that were not evident from circular dichroism, transmission electron microscopy, or limited proteolysis analysis. Finally, sRPT fibrils did not form at pH ≥7 and preformed fibrils rapidly disaggregated under these solution conditions. Collectively, this work yields mechanistic insights into pH-dependent sRPT aggregation in the context of melanosome maturation.


Subject(s)
Fluorescence , Protein Aggregates , gp100 Melanoma Antigen/chemistry , Humans , Hydrogen-Ion Concentration , Protein Domains , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Isoforms/metabolism , Tryptophan/chemistry , Tryptophan/genetics , Tryptophan/metabolism , gp100 Melanoma Antigen/genetics , gp100 Melanoma Antigen/metabolism
12.
Biochim Biophys Acta Biomembr ; 1860(9): 1652-1662, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29526709

ABSTRACT

Self-templating propagation of protein aggregate conformations is increasingly becoming a significant factor in many neurological diseases. In Alzheimer disease (AD), intrinsically disordered amyloid-ß (Aß) peptides undergo aggregation that is sensitive to environmental conditions. High-molecular weight aggregates of Aß that form insoluble fibrils are deposited as senile plaques in AD brains. However, low-molecular weight aggregates called soluble oligomers are known to be the primary toxic agents responsible for neuronal dysfunction. The aggregation process is highly stochastic involving both homotypic (Aß-Aß) and heterotypic (Aß with interacting partners) interactions. Two of the important members of interacting partners are membrane lipids and surfactants, to which Aß shows a perpetual association. Aß-membrane interactions have been widely investigated for more than two decades, and this research has provided a wealth of information. Although this has greatly enriched our understanding, the objective of this review is to consolidate the information from the literature that collectively showcases the unique phenomenon of lipid-mediated Aß oligomer generation, which has largely remained inconspicuous. This is especially important because Aß aggregate "strains" are increasingly becoming relevant in light of the correlations between the structure of aggregates and AD phenotypes. Here, we will focus on aspects of Aß-lipid interactions specifically from the context of how lipid modulation generates a wide variety of biophysically and biochemically distinct oligomer sub-types. This, we believe, will refocus our thinking on the influence of lipids and open new approaches in delineating the mechanisms of AD pathogenesis. This article is part of a Special Issue entitled: Protein Aggregation and Misfolding at the Cell Membrane Interface edited by Ayyalusamy Ramamoorthy.

13.
Biophys J ; 114(3): 539-549, 2018 02 06.
Article in English | MEDLINE | ID: mdl-29414699

ABSTRACT

Proteinaceous deposits composed of fibrillar amyloid-ß (Aß) are the primary neuropathological hallmarks in Alzheimer disease (AD) brains. The nucleation-dependent aggregation of Aß is a stochastic process with frequently observed heterogeneity in aggregate size, structure, and conformation that manifests in fibril polymorphism. Emerging evidence indicates that polymorphic variations in Aß fibrils contribute to phenotypic diversity and the rate of disease progression in AD. We recently demonstrated that a dodecamer strain derived from synthetic Aß42 propagates to morphologically distinct fibrils and selectively induces cerebral amyloid angiopathy phenotype in transgenic mice. This report supports the growing contention that stable oligomer strains can influence phenotypic outcomes by faithful propagation of their structures. Although we determined the mechanism of dodecamer propagation on a mesoscopic scale, the molecular details of the microscopic reactions remained unknown. Here, we have dissected and evaluated individually the kinetics of macroscopic phases in aggregation to gain insight into the process of strain propagation. The bulk rates determined experimentally in each phase were used to build an ensemble kinetic simulation model, which confirmed our observation that dodecamer seeds initially grow by monomer addition toward the formation of a key intermediate. This is followed by conversion of the intermediate to fibrils by oligomer elongation and association mechanisms. Overall, this report reveals important insights into the molecular details of oligomer strain propagation involved in AD pathology.


Subject(s)
Amyloid beta-Peptides/chemistry , Amyloid/chemistry , Protein Aggregation, Pathological , Protein Multimerization , Animals , Humans , Kinetics , Molecular Dynamics Simulation , Protein Conformation , Thermodynamics
14.
Sci Rep ; 7(1): 10370, 2017 09 04.
Article in English | MEDLINE | ID: mdl-28871093

ABSTRACT

Aggregation of amyloid ß (Aß) peptides is a significant event that underpins Alzheimer disease (AD) pathology. Aß aggregates, especially the low-molecular weight oligomers, are the primary toxic agents in AD and hence, there is increasing interest in understanding their formation and behavior. Aggregation is a nucleation-dependent process in which the pre-nucleation events are dominated by Aß homotypic interactions. Dynamic flux and stochasticity during pre-nucleation renders the reactions susceptible to perturbations by other molecules. In this context, we investigate the heterotypic interactions between Aß and fatty acids (FAs) by two independent tool-sets such as reduced order modelling (ROM) and ensemble kinetic simulation (EKS). We observe that FAs influence Aß dynamics distinctively in three broadly-defined FA concentration regimes containing non-micellar, pseudo-micellar or micellar phases. While the non-micellar phase promotes on-pathway fibrils, pseudo-micellar and micellar phases promote predominantly off-pathway oligomers, albeit via subtly different mechanisms. Importantly off-pathway oligomers saturate within a limited molecular size, and likely with a different overall conformation than those formed along the on-pathway, suggesting the generation of distinct conformeric strains of Aß, which may have profound phenotypic outcomes. Our results validate previous experimental observations and provide insights into potential influence of biological interfaces in modulating Aß aggregation pathways.


Subject(s)
Amyloid beta-Peptides/chemistry , Amyloid beta-Peptides/metabolism , Fatty Acids/metabolism , Phase Transition , Protein Aggregates , Protein Aggregation, Pathological/metabolism , Signal Transduction , Algorithms , Humans , Models, Theoretical , Protein Stability
15.
Biomacromolecules ; 18(10): 3359-3366, 2017 Oct 09.
Article in English | MEDLINE | ID: mdl-28893064

ABSTRACT

GM1 ganglioside is known to promote amyloid-ß (Aß) peptide aggregation in Alzheimer's disease. The roles of the individual saccharides and their distribution in this process are not understood. Acrylamide-based glycomonomers with either ß-d-glucose or ß-d-galactose pendant groups were synthesized to mimic the stereochemistry of saccharides present in GM1 and characterized via 1H NMR and electrospray ionization mass spectrometry. Glycopolymers of different molecular weights were synthesized by aqueous reversible addition-fragmentation chain transfer (aRAFT) polymerization and characterized by NMR and GPC. The polymers were used as models to investigate the effects of molecular weight and saccharide unit type on Aß aggregation via thioflavin-T fluorescence and PAGE. High molecular weight (∼350 DP) glucose-containing glycopolymers had a profound effect on Aß aggregation, promoting formation of soluble oligomers of Aß and limiting fibril production, while the other glycopolymers and negative control had little effect on the Aß propagation process.


Subject(s)
Acrylamide/chemistry , Amyloid beta-Peptides/chemistry , Biomimetic Materials/chemical synthesis , G(M1) Ganglioside/chemistry , Galactose/analogs & derivatives , Glucose/analogs & derivatives , Benzothiazoles , Biomimetic Materials/chemistry , Polymerization , Protein Aggregates , Thiazoles/chemistry
16.
Sci Rep ; 7: 40787, 2017 01 18.
Article in English | MEDLINE | ID: mdl-28098204

ABSTRACT

Low molecular weight oligomers of amyloid-ß (Aß) have emerged as the primary toxic agents in the etiology of Alzheimer disease (AD). Polymorphism observed within the aggregation end products of fibrils are known to arise due to microstructural differences among the oligomers. Diversity in aggregate morphology correlates with the differences in AD, cementing the idea that conformational strains of oligomers could be significant in phenotypic outcomes. Therefore, it is imperative to determine the ability of strains to faithfully propagate their structure. Here we report fibril propagation of an Aß42 dodecamer called large fatty acid-derived oligomers (LFAOs). The LFAO oligomeric strain selectively induces acute cerebral amyloid angiopathy (CAA) in neonatally-injected transgenic CRND8 mice. Propagation in-vitro occurs as a three-step process involving the association of LFAO units. LFAO-seeded fibrils possess distinct morphology made of repeating LFAO units that could be regenerated upon sonication. Overall, these data bring forth an important mechanistic perspective into strain-specific propagation of oligomers that has remained elusive thus far.


Subject(s)
Amyloid beta-Peptides/metabolism , Amyloid/metabolism , Protein Multimerization , Amyloid/chemistry , Amyloid/ultrastructure , Amyloid beta-Peptides/chemistry , Amyloidosis/metabolism , Amyloidosis/pathology , Animals , Mice , Mice, Transgenic , Protein Aggregates , Protein Aggregation, Pathological
17.
Biochemistry ; 55(15): 2238-50, 2016 Apr 19.
Article in English | MEDLINE | ID: mdl-27013020

ABSTRACT

Oligomers of amyloid-ß (Aß) have emerged as the primary toxic agents responsible for early synaptic dysfunction and neuronal death in Alzheimer's disease (AD). Characterization of oligomers is an important step in the progress toward delineating the complex molecular mechanisms involved in AD pathogenesis. In our previous reports, we established that a distinct 12-24mer neurotoxic oligomer of Aß42, called Large Fatty Acid derived Oligomers (LFAOs), exhibits a unique property of replication in which LFAOs directly duplicate to quantitatively larger amounts upon interacting with monomers. This self-propagative process of replication is somewhat reminiscent of prion propagation. In this report, we sought to investigate the concentration-dependent conformational dynamics LFAOs undergo and how such transitions manifest in their ability to replicate and induce neuronal apoptosis. The results indicate that LFAOs undergo a concentration-dependent transition between 12mers and disperse 12-24mers with a dissociation constant (Kd) of 0.1 µM. The two species differ in their respective tertiary/quaternary structures but not their secondary structures. This conformational dynamics of LFAOs correlates with their ability to replicate and to induce apoptosis in SH-SY5Y human neuroblastoma cells, with 12mers being more neurotoxic and prone to replication than 12-24mers. The latter result implicates the replication process dominates at low physiological concentrations. The observations made in this report may have profound significance in deciphering the elusive roles of Aß oligomer phenotypes and in determining their prion-type behavior in AD pathology.


Subject(s)
Amyloid beta-Peptides/chemistry , Amyloid beta-Peptides/metabolism , Apoptosis , Neurons/physiology , Protein Multimerization/physiology , Alzheimer Disease/metabolism , Alzheimer Disease/pathology , Amyloid/chemistry , Amyloid/metabolism , Cells, Cultured , Humans , Models, Molecular , Neurons/pathology , Polymerization , Protein Conformation
18.
PLoS One ; 9(11): e111492, 2014.
Article in English | MEDLINE | ID: mdl-25365422

ABSTRACT

The aggregation of amyloid-ß (Aß) peptide and its deposition in parts of the brain form the central processes in the etiology of Alzheimer disease (AD). The low-molecular weight oligomers of Aß aggregates (2 to 30 mers) are known to be the primary neurotoxic agents whose mechanisms of cellular toxicity and synaptic dysfunction have received substantial attention in the recent years. However, how these toxic agents proliferate and induce widespread amyloid deposition throughout the brain, and what mechanism is involved in the amplification and propagation of toxic oligomer species, are far from clear. Emerging evidence based on transgenic mice models indicates a transmissible nature of Aß aggregates and implicates a prion-like mechanism of oligomer propagation, which manifests as the dissemination and proliferation of Aß toxicity. Despite accumulating evidence in support of a transmissible nature of Aß aggregates, a clear, molecular-level understanding of this intriguing mechanism is lacking. Recently, we reported the characterization of unique replicating oligomers of Aß42 (12-24 mers) in vitro called Large Fatty Acid-derived Oligomers (LFAOs) (Kumar et al., 2012, J. Biol. Chem). In the current report, we establish that LFAOs possess physiological activity by activating NF-κB in human neuroblastoma cells, and determine the experimental parameters that control the efficiency of LFAO replication by self-propagation. These findings constitute the first detailed report on monomer - oligomer lateral propagation reactions that may constitute potential mechanism governing transmissibility among Aß oligomers. These data support the previous reports on transmissible mechanisms observed in transgenic animal models.


Subject(s)
Alzheimer Disease/metabolism , Amyloid beta-Peptides/metabolism , Protein Aggregation, Pathological , Protein Multimerization , Amyloid beta-Peptides/chemistry , Amyloid beta-Peptides/pharmacology , Cell Line , Enzyme Activation , Humans , NF-kappa B/metabolism , Neuroblastoma/metabolism , Temperature
19.
Am J Med Qual ; 14(4): 178-84, 1999.
Article in English | MEDLINE | ID: mdl-10452135

ABSTRACT

The objective of this study was to obtain information from providers of a behavioral health service and from decision makers for organizations interacting with that service (external contacts) on their attitudes regarding outcomes assessment in their clinical practice. The goal of obtaining the information was to use it in development of a formal Outcomes Assessment Program for the service. The design was a semi-structured interview format, with entry into a computer database and qualitative analysis of responses obtained. Participants included all providers (n = 26) and a purposive sample of external contacts (n = 10) of an academic Department of Psychiatry. Results indicated differences among categories of external contacts regarding priorities of types of outcomes (general health, general mental health, disorder specific, or patient satisfaction) to be shared and absence of concordance within the service about these priorities. No guidelines were available about preferred instruments, though the Global Assessment of Functioning, the Beck Depression Inventory, and the Abnormal Involuntary Movements Scale emerged as instruments to be prioritized in the service's program. Physicians and nonphysicians differed in their perceptions as to important barriers and advantages of a clinical outcomes assessment program. In conclusion, the survey raised providers' awareness of outcomes assessment and provided information that was used in developing the service's Outcomes Assessment Program. Components of the Program that were influenced by survey input were priorities of outcomes instruments to be included and their potential audiences, time sequence of Program development, time to be allotted to outcomes assessment in clinical encounters, and content of educational experiences for providers.


Subject(s)
Attitude of Health Personnel , Medical Staff, Hospital/psychology , Outcome Assessment, Health Care , Psychiatric Department, Hospital/standards , Academic Medical Centers , Data Collection , Electronic Data Processing , Health Priorities , Health Services Research , Humans , Illinois , Psychiatric Department, Hospital/organization & administration , Surveys and Questionnaires
20.
Psychiatry ; 49(4): 350-8, 1986 Nov.
Article in English | MEDLINE | ID: mdl-3101089

ABSTRACT

In a previous report, the authors identified four dimensions of patient pathology associated with treatment difficulty: withdrawn psychoticism, character pathology, violence-agitation and suicidal-depressed behavior. In a subsequent study, they linked these dimensions to patterns of countertransference. The present research extends the two prior reports by examining the relations of the patient pathology dimensions to staff members' dissatisfaction with four areas of treatment: interpersonal approaches, structure and control, quality of teamwork, and medication. The major findings are: withdrawn psychoticism primarily relates to dissatisfaction with interpersonal treatment approaches; character pathology entails dissatisfaction with the level of structure and control; violence-agitation poses particular problems for teamwork; and suicidal-depressed behavior is unrelated to dissatisfaction with any dimension of treatment. The authors propose that these various problems in treatment are, in part, mediated by patterns of countertransference which they described in the prior paper. These findings should help staff members to focus their attention on areas of treatment in which problems are bound to arise in work with different types of difficult patients.


Subject(s)
Hospitals, Psychiatric , Mental Disorders/therapy , Adolescent , Adult , Countertransference , Depressive Disorder/therapy , Female , Hospitalization , Humans , Long-Term Care , Male , Mental Disorders/psychology , Middle Aged , Personality Disorders/therapy , Psychotic Disorders/therapy , Suicide Prevention
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