Spectroscopic and oxidation-reduction properties of Rhodobacter capsulatus cytochrome c1 and its M183K and M183H variants.

Two variants of the cytochrome c1 component of the Rhodobacter capsulatus cytochrome bc1 complex, in which Met183 (an axial heme ligand) was replaced by lysine (M183K) or histidine (M183H), have been analyzed. Electron paramagnetic resonance (EPR) and magnetic circular dichroism (MCD) spectra of the intact complex indicate that the histidine/methionine heme ligation of the wild-type cytochrome is replaced by histidine/lysine ligation in M183K and histidine/histidine ligation in M183H. Variable amounts of histidine/histidine axial heme ligation were also detected in purified wild-type cytochrome c1 and its M183K variant, suggesting that a histidine outside the CSACH heme-binding domain can be recruited as an alternative ligand. Oxidation-reduction titrations of the heme in purified cytochrome c1 revealed multiple redox forms. Titrations of the purified cytochrome carried out in the oxidative or reductive direction differ. In contrast, titrations of cytochrome c1 in the intact bc1 complex and in a subcomplex missing the Rieske iron-sulfur protein were fully reversible. An Em7 value of -330 mV was measured for the single disulfide bond in cytochrome c1. The origins of heme redox heterogeneity, and of the differences between reductive and oxidative heme titrations, are discussed in terms of conformational changes and the role of the disulfide in maintaining the native structure of cytochrome c1.

Heterologous expression of an endogenous rat cytochrome b(5)/cytochrome b(5) reductase fusion protein: identification of histidines 62 and 85 as the heme axial ligands.

The gene coding for expression of an endogenous soluble fusion protein comprising a b-type cytochrome-containing domain and a FAD-containing domain has been cloned from rat liver mRNA. The 1461-bp hemoflavoprotein gene corresponded to a protein of 493 residues with the heme- and FAD-containing domains comprising the amino and carboxy termini of the protein, respectively. Sequence analysis indicated the heme and flavin domains were directly analogous to the corresponding domains in microsomal cytochrome b(5) (cb5) and cytochrome b(5) reductase (cb5r), respectively. The full-length fusion protein was purified to homogeneity and demonstrated to contain both heme and FAD prosthetic groups by spectroscopic analyses and MALDI-TOF mass spectrometry. The cb5/cb5r fusion protein was able to utilize both NADPH and NADH as reductants and exhibited both NADPH:ferricyanide (k(cat) = 21.7 s(-1), K(NADPH)(m) = 1 microM. K(FeCN6)(m) = 8 microM) and NADPH:cytochrome c (k(cat) = 8.3 s(-1), K(NADPH)(m) = 1 microM. K(cyt c)(m) = 7 microM) reductase activities with a preference for NADPH as the reduced pyridine nucleotide substrate. NADPH-reduction was stereospecific for transfer of the 4R-proton and involved a hydride transfer mechanism with a kinetic isotope effect of 3.1 for NADPH/NADPD. Site-directed mutagenesis was used to examine the role of two conserved histidine residues, H62 and H85, in the heme domain segment. Substitution of either residue by alanine or methionine resulted in the production of simple flavoproteins that were effectively devoid of both heme and NAD(P)H:cytochrome c reductase activity while retaining NAD(P)H:ferricyanide activity, confirming that the former activity required a functional heme domain. These results have demonstrated that the rat cb5/cb5r fusion protein is homologous to the human variant and has identified the heme and FAD as the sites of interaction with cytochrome c and ferricyanide, respectively. Mutagenesis has confirmed the identity of both axial heme ligands which are equivalent to the corresponding residues in microsomal cytochrome b(5).

Electronic, Magnetic, and Redox Properties of [MFe(3)S(4)] Clusters (M = Cd, Cu, Cr) in Pyrococcus furiosus Ferredoxin.

The ground- and excited-state properties of heterometallic [CuFe(3)S(4)](2+,+), [CdFe(3)S(4)](2+,+), and [CrFe(3)S(4)](2+,+) cubane clusters assembled in Pyrococcus furiosus ferredoxin have been investigated by the combination of EPR and variable-temperature/variable-field magnetic circular dichroism (MCD) studies. The results indicate Cd(2+) incorporation into [Fe(3)S(4)](0,-) cluster fragments to yield S = 2 [CdFe(3)S(4)](2+) and S = (5)/(2) [CdFe(3)S(4)](+) clusters and Cu(+) incorporation into [Fe(3)S(4)](+,0) cluster fragments to yield S = (1)/(2) [CuFe(3)S(4)](2+) and S = 2 [CuFe(3)S(4)](+) clusters. This is the first report of the preparation of cubane type [CrFe(3)S(4)](2+,+) clusters, and the combination of EPR and MCD results indicates S = 0 and S = (3)/(2) ground states for the oxidized and reduced forms, respectively. Midpoint potentials for the [CdFe(3)S(4)](2+,+), [CrFe(3)S(4)](2+,+), and [CuFe(3)S(4)](2+,+) couples, E(m) = -470 +/- 15, -440 +/- 10, and +190 +/- 10 mV (vs NHE), respectively, were determined by EPR-monitored redox titrations or direct electrochemistry at a glassy carbon electrode. The trends in redox potential, ground-state spin, and electron delocalization of [MFe(3)S(4)](2+,+) clusters in P. furiosus ferredoxin are discussed as a function of heterometal (M = Cr, Mn, Fe, Co, Ni, Cu, Zn, Cd, and Tl).

EPR Studies of Oxo-Molybdenum(V) Complexes with Sulfur Donor Ligands: Implications for the Molybdenum Center of Sulfite Oxidase.

A series of six-coordinate compounds containing a chelating dithiolate coordinated to the [LMo(V)O](2+) unit (L = hydrotris(3,5-dimethyl-1-pyrazolyl)borate) have been characterized by EPR spectroscopy as models for the molybdenum centers of pterin-containing molybdenum enzymes. The structure of LMoO(bdt) (1) (bdt = 1,2-benzenedithiolate) has been determined by X-ray crystallography; the space group is P2(1)/n with a = 10.727(1) Å, b = 14.673(2) Å, c = 15.887(2) Å, beta = 100.317(4) degrees and Z = 4. Compound 1 exhibits distorted octahedral stereochemistry; the terminal oxo group and the sulfur atoms are mutually cis to one another. The Mo=O distance is 1.678(4) Å, and the average Mo-S distance is 2.373(2) Å. The EPR parameters for 1, determined from simulation of the frozen-solution spectrum, are g(1) = 2.004, g(2) = 1.972, g(3) = 1.934 and A(1)((95,97)Mo) = 50.0 x 10(-)(4), A(2) = 11.4 x 10(-)(4), A(3) = 49.7 x 10(-)(4) cm(-)(1). The EPR parameters for several LMo(V)O{S(CH(2))(x)()S} compounds (x = 2-4) with saturated chelate skeletons are similar to those of 1, indicating that it is the coordinated S atoms and not unsaturation of the chelate skeleton that gives rise to the large g values for 1. The presence of g components larger than the free-electron value is ascribed to low-energy charge transfer transitions from the filled sulfur pi orbitals to half-filled Mo d orbitals. The EPR spectrum of [LMo(V)O{S(2)P(OEt)(2)}](+) shows an unusually large isotropic (31)P hyperfine splitting of 66.1 x 10(-)(4) cm(-)(1) from the noncoordinated phosphorus atom. The frozen-solution EPR spectra of the low-pH and high-pH forms of sulfite oxidase have been reinvestigated in D(2)O and the anisotropic g and A((95,97)Mo) parameters determined by simulation of the spectrum arising from the naturally abundant Mo isotopes (75% I = 0, 25% I = (5)/(2)). The EPR parameters for the low-pH form are g(1) = 2.007, g(2) = 1.974, g(3) = 1.968 and A(1) = 56.7 x 10(-)(4), A(2) = 25.0 x 10(-)(4), A(3) = 16.7 x 10(-)(4) cm(-)(1). The EPR parameters for the high-pH form are g(1) = 1.990, g(2) = 1.966, g(3) = 1.954 and A(1) = 54.4 x 10(-)(4), A(2) = 21.0 x 10(-)(4), A(3) = 11.3 x 10(-)(4) cm(-)(1). These are the first determinations of the complete A((95,97)Mo) hyperfine components for an enzyme that possesses an [Mo(VI)O(2)](2+) core in its fully oxidized state.