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1.
Elife ; 72018 10 30.
Article in English | MEDLINE | ID: mdl-30375971

ABSTRACT

In the hippocampus, the classical pyramidal cell type of the subiculum acts as a primary output, conveying hippocampal signals to a diverse suite of downstream regions. Accumulating evidence suggests that the subiculum pyramidal cell population may actually be comprised of discrete subclasses. Here, we investigated the extent and organizational principles governing pyramidal cell heterogeneity throughout the mouse subiculum. Using single-cell RNA-seq, we find that the subiculum pyramidal cell population can be deconstructed into eight separable subclasses. These subclasses were mapped onto abutting spatial domains, ultimately producing a complex laminar and columnar organization with heterogeneity across classical dorsal-ventral, proximal-distal, and superficial-deep axes. We further show that these transcriptomically defined subclasses correspond to differential protein products and can be associated with specific projection targets. This work deconstructs the complex landscape of subiculum pyramidal cells into spatially segregated subclasses that may be observed, controlled, and interpreted in future experiments.


Subject(s)
Hippocampus/anatomy & histology , Animals , CA1 Region, Hippocampal/cytology , Gene Expression Profiling , Gene Expression Regulation , Hippocampus/cytology , Hippocampus/metabolism , Male , Mice, Transgenic , Pyramidal Cells , Reproducibility of Results , S100 Proteins/metabolism , Sequence Analysis, RNA , Single-Cell Analysis , Transcriptome/genetics
3.
Cell ; 173(5): 1280-1292.e18, 2018 05 17.
Article in English | MEDLINE | ID: mdl-29681453

ABSTRACT

The mammalian hippocampus, comprised of serially connected subfields, participates in diverse behavioral and cognitive functions. It has been postulated that parallel circuitry embedded within hippocampal subfields may underlie such functional diversity. We sought to identify, delineate, and manipulate this putatively parallel architecture in the dorsal subiculum, the primary output subfield of the dorsal hippocampus. Population and single-cell RNA-seq revealed that the subiculum can be divided into two spatially adjacent subregions associated with prominent differences in pyramidal cell gene expression. Pyramidal cells occupying these two regions differed in their long-range inputs, local wiring, projection targets, and electrophysiological properties. Leveraging gene-expression differences across these regions, we use genetically restricted neuronal silencing to show that these regions differentially contribute to spatial working memory. This work provides a coherent molecular-, cellular-, circuit-, and behavioral-level demonstration that the hippocampus embeds structurally and functionally dissociable streams within its serial architecture.


Subject(s)
Hippocampus/metabolism , Animals , Axons/physiology , Behavior, Animal , Brain/metabolism , Brain/pathology , Female , Hippocampus/cytology , In Vitro Techniques , Male , Maze Learning , Memory, Short-Term , Mice , Mice, Inbred C57BL , Mice, Transgenic , Patch-Clamp Techniques , Principal Component Analysis , Pyramidal Cells/cytology , Pyramidal Cells/metabolism , Sequence Analysis, RNA , Transcriptome
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