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1.
Chromosome Res ; 30(4): 351-359, 2022 12.
Article in English | MEDLINE | ID: mdl-36399199

ABSTRACT

Histones H1 and H3 are highly phosphorylated in mitotic HeLa cells but are rapidly dephosphorylated by endogenous protein phosphatases during the isolation of metaphase chromosomes. We show that this dephosphorylation can be prevented by including the sulfhydryl reagent 5,5'-dithiobis-(2-nitrobenzoate) (Ellman's reagent, or DTNB) in the isolation buffer. The minimal amount of DTNB required is approximately stoichiometric with the number of sulfhydryl groups in the lysate. Inhibition of the protein phosphatases can subsequently be reversed by treatment with dithiothreitol or 2-mercaptoethanol. DTNB is compatible with the isolation of either metaphase chromosome clusters or individual metaphase chromosomes. It should be useful in investigations of the structure and biochemistry of chromatin and chromosomes and in the study of possible functions for mitotic histone phosphorylation.


Subject(s)
Chromosomes , Histones , Humans , Histones/metabolism , Dithionitrobenzoic Acid , HeLa Cells , Metaphase , Chromosomes/metabolism , Phosphoprotein Phosphatases/metabolism , Phosphorylation , Mitosis
2.
Am J Hum Genet ; 98(6): 1193-1207, 2016 06 02.
Article in English | MEDLINE | ID: mdl-27259053

ABSTRACT

Autosomal-dominant polycystic kidney disease (ADPKD) is a common, progressive, adult-onset disease that is an important cause of end-stage renal disease (ESRD), which requires transplantation or dialysis. Mutations in PKD1 or PKD2 (∼85% and ∼15% of resolved cases, respectively) are the known causes of ADPKD. Extrarenal manifestations include an increased level of intracranial aneurysms and polycystic liver disease (PLD), which can be severe and associated with significant morbidity. Autosomal-dominant PLD (ADPLD) with no or very few renal cysts is a separate disorder caused by PRKCSH, SEC63, or LRP5 mutations. After screening, 7%-10% of ADPKD-affected and ∼50% of ADPLD-affected families were genetically unresolved (GUR), suggesting further genetic heterogeneity of both disorders. Whole-exome sequencing of six GUR ADPKD-affected families identified one with a missense mutation in GANAB, encoding glucosidase II subunit α (GIIα). Because PRKCSH encodes GIIß, GANAB is a strong ADPKD and ADPLD candidate gene. Sanger screening of 321 additional GUR families identified eight further likely mutations (six truncating), and a total of 20 affected individuals were identified in seven ADPKD- and two ADPLD-affected families. The phenotype was mild PKD and variable, including severe, PLD. Analysis of GANAB-null cells showed an absolute requirement of GIIα for maturation and surface and ciliary localization of the ADPKD proteins (PC1 and PC2), and reduced mature PC1 was seen in GANAB(+/-) cells. PC1 surface localization in GANAB(-/-) cells was rescued by wild-type, but not mutant, GIIα. Overall, we show that GANAB mutations cause ADPKD and ADPLD and that the cystogenesis is most likely driven by defects in PC1 maturation.


Subject(s)
Cysts/genetics , Liver Diseases/genetics , Mutation/genetics , Polycystic Kidney, Autosomal Dominant/genetics , alpha-Glucosidases/genetics , Adult , Aged , Amino Acid Sequence , CRISPR-Cas Systems , Cells, Cultured , Child , Female , Fluorescent Antibody Technique , Humans , Immunoprecipitation , Male , Microscopy, Confocal , Middle Aged , Pedigree , Polycystic Kidney, Autosomal Dominant/pathology , Sequence Homology, Amino Acid
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